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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
Abditibacteriota
Bacteria
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W1910922606
NIGF01000002
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
924
852
-
Lys
CTT
[ENA]
¡û
>W1910922639
NIGF01000023
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
8251
8324
+
Asn
GTT
[ENA]
¡û
>W1910922637
NIGF01000016
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
13410
13483
+
Ile
GAT
[ENA]
¡û
>W1910922638
NIGF01000020
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
14767
14695
-
Ala
TGC
[ENA]
¡û
>W1910922623
NIGF01000007
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
21771
21697
-
Asp
GTC
[ENA]
¡û
>W1910922622
NIGF01000007
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
21873
21800
-
Val
TAC
[ENA]
¡û
>W1910922620
NIGF01000007
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
22044
22115
+
Val
GAC
[ENA]
¡û
>W1910922603
NIGF01000001
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
22751
22680
-
Gly
CCC
[ENA]
¡û
>W1910922635
NIGF01000015
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
28203
28275
+
Phe
GAA
[ENA]
¡û
>W1910922643
NIGF01000026
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
31339
31267
-
Glu
TTC
[ENA]
¡û
>W1910922642
NIGF01000023
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
35623
35550
-
Arg
TCT
[ENA]
¡û
>W1910922641
NIGF01000023
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
35780
35710
-
Gly
TCC
[ENA]
¡û
>W1910922640
NIGF01000023
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
35947
35875
-
Pro
TGG
[ENA]
¡û
>W1910922636
NIGF01000015
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
55282
55364
+
Leu
GAG
[ENA]
¡û
>W1910922629
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
57083
56996
-
Ser
GGA
[ENA]
¡û
>W1910922628
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
57253
57166
-
Ser
CGA
[ENA]
¡û
>W1910922599
NIGF01000001
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
59406
59488
+
Leu
TAA
[ENA]
¡û
>W1910922634
NIGF01000014
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
64642
64569
-
Gln
TTG
[ENA]
¡û
>W1910922633
NIGF01000010
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
72964
72892
-
Arg
CCT
[ENA]
¡û
>W1910922632
NIGF01000010
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
73099
73027
-
Arg
CCG
[ENA]
¡û
>W1910922631
NIGF01000010
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
74196
74269
+
Glu
CTC
[ENA]
¡û
>W1910922630
NIGF01000009
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
79850
79933
+
Leu
CAA
[ENA]
¡û
>W1910922619
NIGF01000006
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
85665
85583
-
Leu
CAG
[ENA]
¡û
>W1910922602
NIGF01000001
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
91051
90962
-
Ser
GCT
[ENA]
¡û
>W1910922624
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
102940
103011
+
Thr
TGT
[ENA]
¡û
>W1910922625
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
103068
103150
+
Tyr
GTA
[ENA]
¡û
>W1910922626
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
103211
103282
+
Thr
GGT
[ENA]
¡û
>W1910922627
NIGF01000008
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
103316
103391
+
Trp
CCA
[ENA]
¡û
>W1910922618
NIGF01000006
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
103912
103986
+
Thr
CGT
[ENA]
¡û
>W1910922610
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
133621
133696
+
Pro
GGG
[ENA]
¡û
>W1910922617
NIGF01000005
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
142621
142546
-
Pro
CGG
[ENA]
¡û
>W1910922621
NIGF01000007
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
160052
159980
-
Gly
GCC
[ENA]
¡û
>W1910922604
NIGF01000002
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
167976
168053
+
Lys
TTT
[ENA]
¡û
>W1910922600
NIGF01000001
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
176534
176608
+
Met
CAT
[ENA]
¡û
>W1910922611
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
195171
195247
+
Met
CAT
[ENA]
¡û
>W1910922612
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
195307
195379
+
Ala
CGC
[ENA]
¡û
>W1910922613
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
195417
195489
+
Ala
GGC
[ENA]
¡û
>W1910922616
NIGF01000005
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
198441
198515
+
His
GTG
[ENA]
¡û
>W1910922615
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
198510
198437
-
Gln
CTG
[ENA]
¡û
>W1910922614
NIGF01000004
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
198630
198560
-
Cys
GCA
[ENA]
¡û
>W1910922605
NIGF01000002
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
215710
215781
+
Val
CAC
[ENA]
¡û
>W1910922609
NIGF01000003
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
240759
240675
-
Ser
TGA
[ENA]
¡û
>W1910922607
NIGF01000003
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
250099
250173
+
Met
CAT
[ENA]
¡û
>W1910922608
NIGF01000003
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
252878
252952
+
Arg
ACG
[ENA]
¡û
>W1910922601
NIGF01000001
Abditibacteriota
Abditibacterium utsteinense LMG 29911 [NIGF]
335657
335730
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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