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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
Armatimonadota
Bacteria
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C131021132
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
71485
71412
-
Val
CAC
[Ensembl]
¡û
>C131021131
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
201446
201370
-
Met
CAT
[Ensembl]
¡û
>C131021089
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
452312
452387
+
Arg
CCT
[Ensembl]
¡û
>C131021090
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
452419
452507
+
Ser
CGA
[Ensembl]
¡û
>C131021091
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
500740
500814
+
Ala
GGC
[Ensembl]
¡û
>C131021130
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
573352
573267
-
Ser
TGA
[Ensembl]
¡û
>C131021092
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
612176
612249
+
Met
CAT
[Ensembl]
¡û
>C131021093
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
651703
651773
+
Gly
TCC
[Ensembl]
¡û
>C131021094
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
651945
652017
+
Arg
TCT
[Ensembl]
¡û
>C131021129
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
667808
667736
-
Trp
CCA
[Ensembl]
¡û
>C133000398
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
669532
669461
-
Thr
GGT
[Ensembl]
¡û
>C131021128
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
669621
669538
-
Tyr
GTA
[Ensembl]
¡û
>C131021127
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
739356
739266
-
Ser
GGA
[Ensembl]
¡û
>C135000821
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
957833
957932
+
SeC
TCA
[Ensembl]
¡û
>C131021126
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1085120
1085036
-
Leu
CAG
[Ensembl]
¡û
>C131021095
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1298641
1298723
+
Leu
TAG
[Ensembl]
¡û
>C131021096
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1298749
1298821
+
Gly
GCC
[Ensembl]
¡û
>C131021125
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1418164
1418090
-
Asn
GTT
[Ensembl]
¡û
>C131021097
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1621634
1621705
+
Glu
CTC
[Ensembl]
¡û
>C131021124
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1684168
1684084
-
Leu
CAA
[Ensembl]
¡û
>C131021098
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1946403
1946476
+
Gln
CTG
[Ensembl]
¡û
>C131021099
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
1969425
1969502
+
Asp
GTC
[Ensembl]
¡û
>C131021100
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2000591
2000666
+
Pro
CGG
[Ensembl]
¡û
>C131021123
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2136218
2136143
-
Arg
TCG
[Ensembl]
¡û
>C131021101
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2185430
2185502
+
Lys
CTT
[Ensembl]
¡û
>C131021122
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2208751
2208677
-
Thr
TGT
[Ensembl]
¡û
>C131021121
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2208842
2208770
-
Met
CAT
[Ensembl]
¡û
>C131021120
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2275872
2275800
-
Ala
CGC
[Ensembl]
¡û
>C131021102
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2717897
2717971
+
Pro
GGG
[Ensembl]
¡û
>C131021103
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2731632
2731712
+
Leu
TAA
[Ensembl]
¡û
>C131021104
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2744470
2744543
+
Phe
GAA
[Ensembl]
¡û
>C133000397
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2846858
2846931
+
Ile
GAT
[Ensembl]
¡û
>C131021105
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2846954
2847029
+
Ala
TGC
[Ensembl]
¡û
>C131021106
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2892733
2892805
+
Pro
TGG
[Ensembl]
¡û
>C131021119
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2918433
2918360
-
Val
GAC
[Ensembl]
¡û
>C131021107
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2986816
2986891
+
Arg
CCG
[Ensembl]
¡û
>C131021108
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2986933
2987005
+
Gln
TTG
[Ensembl]
¡û
>C131021118
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
2990450
2990377
-
Val
TAC
[Ensembl]
¡û
>C131021109
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3024692
3024784
+
Ser
GCT
[Ensembl]
¡û
>C131021110
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3116670
3116744
+
Lys
TTT
[Ensembl]
¡û
>C131021117
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3121511
3121437
-
Cys
GCA
[Ensembl]
¡û
>C131021116
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3121614
3121543
-
Gly
CCC
[Ensembl]
¡û
>C131021111
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3174030
3174104
+
His
GTG
[Ensembl]
¡û
>C131021112
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3231228
3231301
+
Arg
GCG
[Ensembl]
¡û
>C131021113
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3299790
3299861
+
Glu
TTC
[Ensembl]
¡û
>C131021114
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3299881
3299963
+
Leu
GAG
[Ensembl]
¡û
>C131021115
HF951689
Armatimonadota
Chthonomonas calidirosea T49 [HF951689]
3303487
3303416
-
Thr
CGT
[Ensembl]
¡û
>C151017259
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
130454
130529
+
Trp
CCA
[Ensembl]
¡û
>C151017260
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
286038
286112
+
Val
GAC
[Ensembl]
¡û
>C151017305
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
866119
866044
-
Ala
CGC
[Ensembl]
¡û
>C151017261
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1077445
1077521
+
Ile
GAT
[Ensembl]
¡û
>C151017304
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1148662
1148587
-
Ala
TGC
[Ensembl]
¡û
>C151017303
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1210052
1209980
-
Val
CAC
[Ensembl]
¡û
>C151017302
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1340220
1340149
-
Gln
TTG
[Ensembl]
¡û
>C151017301
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1495843
1495768
-
Ala
GGC
[Ensembl]
¡û
>C151017262
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1514351
1514424
+
Gly
TCC
[Ensembl]
¡û
>C151017263
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1514473
1514547
+
Gly
CCC
[Ensembl]
¡û
>C151017264
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1547469
1547544
+
Lys
TTT
[Ensembl]
¡û
>C151017265
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1611256
1611331
+
His
GTG
[Ensembl]
¡û
>C151017266
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1757445
1757536
+
Ser
GCT
[Ensembl]
¡û
>C151017267
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1943878
1943964
+
Leu
GAG
[Ensembl]
¡û
>C151017300
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
1978320
1978247
-
Arg
TCT
[Ensembl]
¡û
>C151017299
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
2369412
2369318
-
SeC
TCA
[Ensembl]
¡û
>C151017268
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
2550441
2550528
+
Ser
CGA
[Ensembl]
¡û
>C151017269
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
2669409
2669485
+
Pro
GGG
[Ensembl]
¡û
>C151017298
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
2922710
2922635
-
Arg
CCT
[Ensembl]
¡û
>C151017297
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3022348
3022266
-
Leu
TAA
[Ensembl]
¡û
>C151017296
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3264830
3264754
-
Pro
CGG
[Ensembl]
¡û
>C151017270
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3309866
3309951
+
Tyr
GTA
[Ensembl]
¡û
>C151017271
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3309955
3310029
+
Thr
GGT
[Ensembl]
¡û
>C151017295
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3446184
3446109
-
Phe
GAA
[Ensembl]
¡û
>C151017294
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3446271
3446196
-
Asp
GTC
[Ensembl]
¡û
>C151017293
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3466058
3465973
-
Leu
CAA
[Ensembl]
¡û
>C151017292
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3537561
3537486
-
Gln
CTG
[Ensembl]
¡û
>C151017291
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3647529
3647454
-
Asn
GTT
[Ensembl]
¡û
>C151017272
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3663443
3663518
+
Lys
CTT
[Ensembl]
¡û
>C151017273
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3736847
3736922
+
Met
CAT
[Ensembl]
¡û
>C151017274
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3860084
3860158
+
Gly
GCC
[Ensembl]
¡û
>C151017275
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3891209
3891296
+
Ser
TGA
[Ensembl]
¡û
>C151017290
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3900312
3900236
-
Met
CAT
[Ensembl]
¡û
>C151017276
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3960345
3960420
+
Glu
TTC
[Ensembl]
¡û
>C151017277
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
3964983
3965059
+
Cys
GCA
[Ensembl]
¡û
>C151017289
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4021004
4020929
-
Arg
CCG
[Ensembl]
¡û
>C151017288
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4040711
4040636
-
Val
TAC
[Ensembl]
¡û
>C151017287
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4316151
4316065
-
Leu
CAG
[Ensembl]
¡û
>C151017286
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4395387
4395311
-
Pro
TGG
[Ensembl]
¡û
>C151017278
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4546358
4546434
+
Met
CAT
[Ensembl]
¡û
>C151017279
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4586311
4586396
+
Leu
TAG
[Ensembl]
¡û
>C151017280
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4676688
4676763
+
Arg
TCG
[Ensembl]
¡û
>C151017281
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4689249
4689325
+
Glu
CTC
[Ensembl]
¡û
>C151017285
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4748201
4748127
-
Thr
TGT
[Ensembl]
¡û
>C151017282
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4830691
4830781
+
Ser
GGA
[Ensembl]
¡û
>C151017284
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
4985746
4985671
-
Arg
GCG
[Ensembl]
¡û
>C151017283
CP007139
Armatimonadota
Fimbriimonas ginsengisoli Gsoil 348 [CP007139]
5138244
5138318
+
Thr
CGT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK