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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
Bacteroidota
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PL201001332
CP059406
Bacteroidota
Bacteroides sp. CACC 737 plasmid:pCACC737_1 [CP059406]
26243
26318
+
Lys
TTT
[ENA]
¡û
>PL201001335
CP059409
Bacteroidota
Bacteroides sp. CACC 737 plasmid:pCACC737_3 [CP059409]
962
890
-
Thr
GGT
[ENA]
¡û
>PL201001334
CP059409
Bacteroidota
Bacteroides sp. CACC 737 plasmid:pCACC737_3 [CP059409]
1062
979
-
Tyr
GTA
[ENA]
¡û
>PL201001333
CP059409
Bacteroidota
Bacteroides sp. CACC 737 plasmid:pCACC737_3 [CP059409]
1259
1185
-
Thr
TGT
[ENA]
¡û
>PL201000882
CP051678
Bacteroidota
Spirosoma sp. CJU-R4 plasmid:unnamed1 [CP051678]
230597
230672
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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