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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
Balneolota
Bacteria
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C181160254
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3536
3620
+
Leu
GAG
-
¡û
>C181160255
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
5795
5877
+
Leu
TAG
-
¡û
>C181160256
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
111744
111818
+
Arg
ACG
-
¡û
>C181160257
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
546094
546178
+
Leu
CAG
-
¡û
>C181160296
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
594956
594883
-
Lys
TTT
-
¡û
>C181160295
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
679568
679494
-
Pro
GGG
-
¡û
>C181160258
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
839548
839623
+
Val
TAC
-
¡û
>C181160294
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
955111
955037
-
Met
CAT
-
¡û
>C181160259
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1016878
1016951
+
Phe
GAA
-
¡û
>C181160260
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1019649
1019723
+
Ile
GAT
-
¡û
>C181160261
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1019777
1019851
+
Ala
TGC
-
¡û
>C181160262
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1255940
1256012
+
Thr
TGT
-
¡û
>C181160263
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1256037
1256123
+
Tyr
GTA
-
¡û
>C181160264
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1256131
1256206
+
Gly
TCC
-
¡û
>C181160265
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1256217
1256289
+
Thr
GGT
-
¡û
>C181160266
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1257573
1257646
+
Trp
CCA
-
¡û
>C181160267
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1319200
1319274
+
Ile
GAT
-
¡û
>C181160268
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1319328
1319402
+
Ala
TGC
-
¡û
>C181160269
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1454526
1454599
+
Gly
GCC
-
¡û
>C181160270
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1529505
1529590
+
Ser
TGA
-
¡û
>C181160293
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1577874
1577801
-
Glu
TTC
-
¡û
>C181160292
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1577980
1577906
-
His
GTG
-
¡û
>C181160291
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1578092
1578019
-
Glu
TTC
-
¡û
>C181160290
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1578200
1578129
-
Cys
GCA
-
¡û
>C181160289
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1578284
1578210
-
Arg
TCT
-
¡û
>C181160288
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1578394
1578320
-
Pro
TGG
-
¡û
>C181160287
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1682652
1682579
-
Met
CAT
-
¡û
>C181160271
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1937958
1938032
+
Ile
GAT
-
¡û
>C181160272
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
1938086
1938160
+
Ala
TGC
-
¡û
>C181160273
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
2209942
2210029
+
Leu
TAA
-
¡û
>C181160274
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
2718975
2719065
+
Ser
GGA
-
¡û
>C181160286
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
2777405
2777332
-
Met
CAT
-
¡û
>C181160275
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
2917521
2917595
+
Val
GAC
-
¡û
>C181160285
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
2931330
2931258
-
Asn
GTT
-
¡û
>C181160276
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3034952
3035034
+
Leu
CAA
-
¡û
>C181160284
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3515873
3515784
-
Ser
GCT
-
¡û
>C181160283
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3634796
3634725
-
Gln
TTG
-
¡û
>C181160282
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3791342
3791266
-
Arg
CCG
-
¡û
>C181160277
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3939698
3939773
+
Ala
GGC
-
¡û
>C181160278
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
3943418
3943492
+
Asp
GTC
-
¡û
>C181160281
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
4039835
4039761
-
Pro
CGG
-
¡û
>C181160279
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
4127440
4127513
+
Arg
CCT
-
¡û
>C181160280
CP027806
Balneolota
Candidatus Cyclonatronum proteinivorum Omega [CP027806]
4278808
4278735
-
Thr
CGT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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