This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
Caldisericota
Bacteria
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C121000406
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319816
319890
+
Gly
CCC
[Ensembl]
¡û
>C121000407
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319892
319966
+
Cys
GCA
[Ensembl]
¡û
>C121000408
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
319975
320061
+
Leu
TAA
[Ensembl]
¡û
>C121000451
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325767
325693
-
Thr
CGT
[Ensembl]
¡û
>C121000450
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325868
325794
-
Gly
GCC
[Ensembl]
¡û
>C121000449
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
325968
325892
-
Asp
GTC
[Ensembl]
¡û
>C121000448
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326089
326015
-
Val
CAC
[Ensembl]
¡û
>C121000447
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326183
326109
-
Glu
TTC
[Ensembl]
¡û
>C121000446
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
326263
326188
-
Lys
TTT
[Ensembl]
¡û
>C121000445
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
358824
358750
-
Glu
CTC
[Ensembl]
¡û
>C121000444
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
358901
358828
-
Gln
CTG
[Ensembl]
¡û
>C121000443
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
553202
553127
-
Ala
GGC
[Ensembl]
¡û
>C121000442
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
585103
585029
-
Gln
TTG
[Ensembl]
¡û
>C121000409
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
586813
586896
+
Leu
CAG
[Ensembl]
¡û
>C121000410
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628375
628459
+
Leu
GAG
[Ensembl]
¡û
>C121000411
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628463
628537
+
Val
TAC
[Ensembl]
¡û
>C121000412
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
628541
628616
+
Phe
GAA
[Ensembl]
¡û
>C121000441
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
656715
656640
-
Met
CAT
[Ensembl]
¡û
>C121000413
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
697861
697938
+
Pro
TGG
[Ensembl]
¡û
>C121000414
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
697945
698021
+
Arg
TCT
[Ensembl]
¡û
>C121000415
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698028
698104
+
His
GTG
[Ensembl]
¡û
>C121000416
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698107
698183
+
Arg
CCT
[Ensembl]
¡û
>C121000417
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698187
698263
+
Arg
TCG
[Ensembl]
¡û
>C121000418
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698277
698352
+
Lys
CTT
[Ensembl]
¡û
>C121000419
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
698376
698460
+
Leu
TAG
[Ensembl]
¡û
>C121000420
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
738999
739075
+
Arg
ACG
[Ensembl]
¡û
>C121000421
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
798355
798445
+
Ser
GGA
[Ensembl]
¡û
>C121000440
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
866899
866825
-
Ala
TGC
[Ensembl]
¡û
>C121000439
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
866981
866905
-
Ile
GAT
[Ensembl]
¡û
>C121000438
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
926043
925968
-
Asn
GTT
[Ensembl]
¡û
>C121000437
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
958354
958265
-
Ser
CGA
[Ensembl]
¡û
>C121000422
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1052530
1052616
+
Ser
TGA
[Ensembl]
¡û
>C121000436
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1071015
1070940
-
Trp
CCA
[Ensembl]
¡û
>C121000435
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072520
1072445
-
Thr
GGT
[Ensembl]
¡û
>C121000434
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072623
1072547
-
Met
CAT
[Ensembl]
¡û
>C121000433
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072701
1072627
-
Gly
TCC
[Ensembl]
¡û
>C121000432
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072791
1072705
-
Tyr
GTA
[Ensembl]
¡û
>C121000431
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1072869
1072794
-
Thr
TGT
[Ensembl]
¡û
>C121000430
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1126072
1125995
-
Pro
CGG
[Ensembl]
¡û
>C121000429
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1126153
1126076
-
Pro
GGG
[Ensembl]
¡û
>C121000428
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1127362
1127288
-
Met
CAT
[Ensembl]
¡û
>C121000427
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1227605
1227531
-
Val
GAC
[Ensembl]
¡û
>C121000423
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1250764
1250853
+
Leu
CAA
[Ensembl]
¡û
>C121000424
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1284764
1284857
+
Ser
GCT
[Ensembl]
¡û
>C121000426
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1306194
1306120
-
Arg
CCG
[Ensembl]
¡û
>C121000425
AP012051
Caldisericota
Caldisericum exile AZM16c01 [AP012051]
1423147
1423073
-
Ala
CGC
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK