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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
Chrysiogenota
Bacteria
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C11107069
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
98254
98161
-
Ser
GCT
[Ensembl]
¡û
>C11107034
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
148801
148886
+
Leu
CAG
[Ensembl]
¡û
>C11107068
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
369296
369207
-
Ser
GGA
[Ensembl]
¡û
>C11107067
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
482304
482228
-
Gly
TCC
[Ensembl]
¡û
>C11107066
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
482397
482313
-
Tyr
GTA
[Ensembl]
¡û
>C11107065
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
482488
482413
-
Thr
TGT
[Ensembl]
¡û
>C11107064
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
515251
515168
-
Leu
TAG
[Ensembl]
¡û
>C11107035
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
673997
674072
+
Arg
TCG
[Ensembl]
¡û
>C11107036
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
691866
691941
+
Ala
GGC
[Ensembl]
¡û
>C11107063
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
733759
733672
-
Leu
TAA
[Ensembl]
¡û
>C11107062
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
733874
733801
-
Cys
GCA
[Ensembl]
¡û
>C11107061
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
733960
733885
-
Gly
GCC
[Ensembl]
¡û
>C11300189
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
802097
802171
+
Val
GAC
[Ensembl]
¡û
>C11107037
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
802605
802680
+
Phe
GAA
[Ensembl]
¡û
>C11107038
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1047102
1047178
+
Met
CAT
[Ensembl]
¡û
>C11107039
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1047187
1047263
+
Met
CAT
[Ensembl]
¡û
>C11107060
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1071027
1070951
-
Pro
GGG
[Ensembl]
¡û
>C11107040
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1150325
1150400
+
Trp
CCA
[Ensembl]
¡û
>C11107041
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1187151
1187227
+
Ile
GAT
[Ensembl]
¡û
>C11107042
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1187234
1187309
+
Ala
TGC
[Ensembl]
¡û
>C11107059
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1213538
1213462
-
Pro
CGG
[Ensembl]
¡û
>C11107058
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1276143
1276057
-
Leu
CAA
[Ensembl]
¡û
>C11107043
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1278102
1278176
+
Gln
TTG
[Ensembl]
¡û
>C11107057
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1449900
1449814
-
Leu
GAG
[Ensembl]
¡û
>C11107056
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1460097
1460020
-
Arg
CCT
[Ensembl]
¡û
>C11107055
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1628700
1628615
-
Ser
TGA
[Ensembl]
¡û
>C11107054
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1876376
1876301
-
Lys
TTT
[Ensembl]
¡û
>C11107053
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1876490
1876414
-
Asp
GTC
[Ensembl]
¡û
>C11107052
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1876577
1876502
-
Val
TAC
[Ensembl]
¡û
>C11107051
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1876657
1876580
-
Glu
TTC
[Ensembl]
¡û
>C11107050
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1976936
1976862
-
His
GTG
[Ensembl]
¡û
>C11107049
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1977102
1977026
-
Arg
TCT
[Ensembl]
¡û
>C11107048
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
1977188
1977111
-
Pro
TGG
[Ensembl]
¡û
>C11107047
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
2141901
2141825
-
Thr
GGT
[Ensembl]
¡û
>C11107046
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
2323844
2323769
-
Asn
GTT
[Ensembl]
¡û
>C11107045
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
2332447
2332371
-
Met
CAT
[Ensembl]
¡û
>C11107044
CP002432
Chrysiogenota
Desulfurispirillum indicum S5 [CP002432]
2785410
2785486
+
Arg
ACG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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