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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
Chrysiogenota
Bacteria
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W141139262
AWNK01000016
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
8329
8405
+
Arg
ACG
[ENA]
¡û
>W141139264
AWNK01000018
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
14899
14974
+
Met
CAT
[ENA]
¡û
>W141139263
AWNK01000016
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
20544
20618
+
Val
GAC
[ENA]
¡û
>W141139261
AWNK01000010
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
23831
23906
+
Gly
CCC
[ENA]
¡û
>W141139253
AWNK01000007
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
25966
26041
+
Gly
GCC
[ENA]
¡û
>W141139254
AWNK01000007
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
26053
26126
+
Cys
GCA
[ENA]
¡û
>W141139255
AWNK01000007
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
26159
26246
+
Leu
TAA
[ENA]
¡û
>W141139258
AWNK01000008
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
38121
38196
+
Asn
GTT
[ENA]
¡û
>W141139239
AWNK01000002
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
42432
42357
-
Lys
TTT
[ENA]
¡û
>W141139238
AWNK01000002
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
42533
42457
-
Asp
GTC
[ENA]
¡û
>W141139237
AWNK01000002
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
42621
42546
-
Val
TAC
[ENA]
¡û
>W141139236
AWNK01000002
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
42703
42627
-
Glu
TTC
[ENA]
¡û
>W141139260
AWNK01000009
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
61177
61084
-
Ser
GCT
[ENA]
¡û
>W141139259
AWNK01000009
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
69678
69603
-
Arg
CCG
[ENA]
¡û
>W141139235
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
90052
89976
-
Pro
GGG
[ENA]
¡û
>W141139245
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
108653
108727
+
Gln
TTG
[ENA]
¡û
>W141139252
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
115507
115432
-
Trp
CCA
[ENA]
¡û
>W141139246
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
131053
131130
+
Pro
TGG
[ENA]
¡û
>W141139247
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
131147
131223
+
Arg
TCT
[ENA]
¡û
>W141139248
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
131259
131334
+
His
GTG
[ENA]
¡û
>W141139244
AWNK01000005
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
152862
152787
-
Gly
GCC
[ENA]
¡û
>W141139243
AWNK01000005
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
152949
152866
-
Leu
TAG
[ENA]
¡û
>W141139251
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
175422
175347
-
Phe
GAA
[ENA]
¡û
>W141139257
AWNK01000007
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
177380
177295
-
Leu
CAG
[ENA]
¡û
>W141139234
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
190083
189998
-
Leu
GAG
[ENA]
¡û
>W141139241
AWNK01000005
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
194654
194743
+
Ser
GGA
[ENA]
¡û
>W141139242
AWNK01000005
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
194887
194801
-
Leu
CAA
[ENA]
¡û
>W141139230
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
198594
198670
+
Met
CAT
[ENA]
¡û
>W141139249
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
211358
211434
+
Met
CAT
[ENA]
¡û
>W141139250
AWNK01000006
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
211446
211522
+
Met
CAT
[ENA]
¡û
>W141139233
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
302641
302565
-
Gly
TCC
[ENA]
¡û
>W141139232
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
302735
302651
-
Tyr
GTA
[ENA]
¡û
>W141139231
AWNK01000001
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
302837
302763
-
Thr
TGT
[ENA]
¡û
>W141139240
AWNK01000003
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
342879
342954
+
Ala
GGC
[ENA]
¡û
>W141139256
AWNK01000007
Chrysiogenota
Chrysiogenes arsenatis DSM 11915 [AWNK]
359226
359311
+
Ser
TGA
[ENA]
¡û
>W11117435
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
378
304
-
His
GTG
[ENA]
¡û
>W10114099
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
378
304
-
His
GTG
[ENA]
¡û
>W11117434
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
544
468
-
Arg
TCT
[ENA]
¡û
>W10114098
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
544
468
-
Arg
TCT
[ENA]
¡û
>W10114097
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
630
553
-
Pro
TGG
[ENA]
¡û
>W11117433
ADGU01000022
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
630
553
-
Pro
TGG
[ENA]
¡û
>W11300486
ADGU01000051
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
1209
1283
+
Val
GAC
[ENA]
¡û
>W10114087
ADGU01000013
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
1556
1470
-
Leu
CAA
[ENA]
¡û
>W11117423
ADGU01000013
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
1556
1470
-
Leu
CAA
[ENA]
¡û
>W11117441
ADGU01000051
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
1717
1792
+
Phe
GAA
[ENA]
¡û
>W10114105
ADGU01000051
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
1717
1792
+
Phe
GAA
[ENA]
¡û
>W10114088
ADGU01000014
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2108
2032
-
Pro
CGG
[ENA]
¡û
>W11117424
ADGU01000014
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2108
2032
-
Pro
CGG
[ENA]
¡û
>W10114094
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2454
2367
-
Leu
TAA
[ENA]
¡û
>W11117430
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2454
2367
-
Leu
TAA
[ENA]
¡û
>W10114093
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2569
2496
-
Cys
GCA
[ENA]
¡û
>W11117429
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2569
2496
-
Cys
GCA
[ENA]
¡û
>W11117428
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2655
2580
-
Gly
GCC
[ENA]
¡û
>W10114092
ADGU01000016
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2655
2580
-
Gly
GCC
[ENA]
¡û
>W11117438
ADGU01000046
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2781
2866
+
Leu
CAG
[ENA]
¡û
>W10114102
ADGU01000046
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
2781
2866
+
Leu
CAG
[ENA]
¡û
>W11117422
ADGU01000013
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
3515
3589
+
Gln
TTG
[ENA]
¡û
>W10114086
ADGU01000013
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
3515
3589
+
Gln
TTG
[ENA]
¡û
>W11117439
ADGU01000047
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
4795
4871
+
Met
CAT
[ENA]
¡û
>W10114103
ADGU01000047
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
4795
4871
+
Met
CAT
[ENA]
¡û
>W10114104
ADGU01000047
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
4880
4956
+
Met
CAT
[ENA]
¡û
>W11117440
ADGU01000047
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
4880
4956
+
Met
CAT
[ENA]
¡û
>W10114106
ADGU01000061
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
5328
5253
-
Asn
GTT
[ENA]
¡û
>W11117442
ADGU01000061
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
5328
5253
-
Asn
GTT
[ENA]
¡û
>W10114107
ADGU01000066
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
5962
6038
+
Arg
ACG
[ENA]
¡û
>W11117443
ADGU01000066
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
5962
6038
+
Arg
ACG
[ENA]
¡û
>W10114101
ADGU01000041
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
8863
8780
-
Leu
TAG
[ENA]
¡û
>W11117437
ADGU01000041
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
8863
8780
-
Leu
TAG
[ENA]
¡û
>W11117436
ADGU01000029
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
11144
11068
-
Pro
GGG
[ENA]
¡û
>W10114100
ADGU01000029
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
11144
11068
-
Pro
GGG
[ENA]
¡û
>W11117421
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
16920
16845
-
Lys
TTT
[ENA]
¡û
>W10114085
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
16920
16845
-
Lys
TTT
[ENA]
¡û
>W10114084
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17034
16958
-
Asp
GTC
[ENA]
¡û
>W11117420
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17034
16958
-
Asp
GTC
[ENA]
¡û
>W10114083
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17121
17046
-
Val
TAC
[ENA]
¡û
>W11117419
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17121
17046
-
Val
TAC
[ENA]
¡û
>W11117418
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17201
17124
-
Glu
TTC
[ENA]
¡û
>W10114082
ADGU01000009
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
17201
17124
-
Glu
TTC
[ENA]
¡û
>W11117431
ADGU01000017
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
21404
21328
-
Thr
GGT
[ENA]
¡û
>W10114095
ADGU01000017
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
21404
21328
-
Thr
GGT
[ENA]
¡û
>W10114079
ADGU01000006
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
22763
22674
-
Ser
GGA
[ENA]
¡û
>W11117415
ADGU01000006
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
22763
22674
-
Ser
GGA
[ENA]
¡û
>W11117432
ADGU01000021
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
27227
27302
+
Trp
CCA
[ENA]
¡û
>W10114096
ADGU01000021
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
27227
27302
+
Trp
CCA
[ENA]
¡û
>W11117427
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41608
41532
-
Gly
TCC
[ENA]
¡û
>W10114091
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41608
41532
-
Gly
TCC
[ENA]
¡û
>W10114090
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41701
41617
-
Tyr
GTA
[ENA]
¡û
>W11117426
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41701
41617
-
Tyr
GTA
[ENA]
¡û
>W10114089
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41792
41717
-
Thr
TGT
[ENA]
¡û
>W11117425
ADGU01000015
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
41792
41717
-
Thr
TGT
[ENA]
¡û
>W11117417
ADGU01000008
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
66988
66902
-
Leu
GAG
[ENA]
¡û
>W10114081
ADGU01000008
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
66988
66902
-
Leu
GAG
[ENA]
¡û
>W10114080
ADGU01000008
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
77185
77108
-
Arg
CCT
[ENA]
¡û
>W11117416
ADGU01000008
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
77185
77108
-
Arg
CCT
[ENA]
¡û
>W10114077
ADGU01000004
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
78962
79037
+
Arg
TCG
[ENA]
¡û
>W11117413
ADGU01000004
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
78962
79037
+
Arg
TCG
[ENA]
¡û
>W11117412
ADGU01000002
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
83823
83730
-
Ser
GCT
[ENA]
¡û
>W10114076
ADGU01000002
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
83823
83730
-
Ser
GCT
[ENA]
¡û
>W10114078
ADGU01000004
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
96831
96906
+
Ala
GGC
[ENA]
¡û
>W11117414
ADGU01000004
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
96831
96906
+
Ala
GGC
[ENA]
¡û
>W10114075
ADGU01000001
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
152773
152688
-
Ser
TGA
[ENA]
¡û
>W11117411
ADGU01000001
Chrysiogenota
Desulfurispirillum indicum S5 [ADGU]
152773
152688
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK