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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Coprothermobacterota
Bacteria
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C09103451
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
209291
209196
-
SeC
TCA
[Ensembl]
¡û
>C09103405
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
412354
412430
+
Arg
ACG
[Ensembl]
¡û
>C09103406
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
421604
421696
+
Ser
GGA
[Ensembl]
¡û
>C09103450
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
428093
428006
-
Leu
CAG
[Ensembl]
¡û
>C09103407
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
461495
461569
+
Gln
TTG
[Ensembl]
¡û
>C09103449
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
496870
496783
-
Ser
TGA
[Ensembl]
¡û
>C09103408
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
590434
590525
+
Ser
GCT
[Ensembl]
¡û
>C09103409
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
590749
590823
+
Val
CAC
[Ensembl]
¡û
>C09103410
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
590831
590905
+
Gly
GCC
[Ensembl]
¡û
>C09103411
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
590940
591014
+
Thr
CGT
[Ensembl]
¡û
>C09103412
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
594378
594452
+
Pro
GGG
[Ensembl]
¡û
>C09103413
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
598774
598850
+
Pro
CGG
[Ensembl]
¡û
>C09103414
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
682081
682166
+
Leu
TAA
[Ensembl]
¡û
>C09103415
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
731972
732049
+
Pro
TGG
[Ensembl]
¡û
>C09103416
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
732054
732130
+
Arg
TCT
[Ensembl]
¡û
>C09103417
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
732136
732212
+
His
GTG
[Ensembl]
¡û
>C09103418
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
732221
732297
+
Arg
CCT
[Ensembl]
¡û
>C09103419
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
732304
732380
+
Arg
TCG
[Ensembl]
¡û
>C09103420
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
734096
734171
+
Lys
TTT
[Ensembl]
¡û
>C09103421
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
734174
734249
+
Lys
CTT
[Ensembl]
¡û
>C09103422
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
734258
734343
+
Leu
TAG
[Ensembl]
¡û
>C09103423
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
749650
749724
+
Val
GAC
[Ensembl]
¡û
>C09103448
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805220
805147
-
Cys
GCA
[Ensembl]
¡û
>C09103447
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805301
805227
-
Gly
CCC
[Ensembl]
¡û
>C09103446
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805492
805417
-
Phe
GAA
[Ensembl]
¡û
>C09103445
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805576
805500
-
Asp
GTC
[Ensembl]
¡û
>C09103444
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805655
805581
-
Val
TAC
[Ensembl]
¡û
>C09103443
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805747
805660
-
Leu
GAG
[Ensembl]
¡û
>C09103424
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
805865
805939
+
Ala
CGC
[Ensembl]
¡û
>C09103442
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
831103
831029
-
Met
CAT
[Ensembl]
¡û
>C09103441
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
831193
831117
-
Met
CAT
[Ensembl]
¡û
>C09103440
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
856344
856269
-
Trp
CCA
[Ensembl]
¡û
>C09103439
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
857846
857771
-
Thr
GGT
[Ensembl]
¡û
>C09103438
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
857927
857852
-
Gly
TCC
[Ensembl]
¡û
>C09103437
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
858018
857933
-
Tyr
GTA
[Ensembl]
¡û
>C09103436
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
858486
858411
-
Thr
TGT
[Ensembl]
¡û
>C09103435
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
870370
870296
-
Ala
GGC
[Ensembl]
¡û
>C09103434
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
907047
906972
-
Glu
TTC
[Ensembl]
¡û
>C09103433
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
907129
907054
-
Met
CAT
[Ensembl]
¡û
>C09103432
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
907212
907138
-
Glu
CTC
[Ensembl]
¡û
>C09103431
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
907305
907231
-
Gln
CTG
[Ensembl]
¡û
>C09103425
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
934174
934262
+
Leu
CAA
[Ensembl]
¡û
>C09103430
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
939802
939728
-
Ala
TGC
[Ensembl]
¡û
>C09103429
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
939989
939913
-
Ile
GAT
[Ensembl]
¡û
>C09103428
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
981474
981399
-
Asn
GTT
[Ensembl]
¡û
>C09103427
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
989030
988955
-
Arg
CCG
[Ensembl]
¡û
>C09103426
CP001145
Coprothermobacterota
Coprothermobacter proteolyticus DSM 5265 [CP001145]
1159654
1159565
-
Ser
CGA
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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