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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>SRA1001675
SRR001080.16913
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
82
8
-
Ala
TGC
[SRA]
>SRA1001676
SRR001080.19861
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
109
27
-
Leu
GAG
[SRA]
>SRA1001677
SRR001080.21128
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
75
1
-
Ala
TGC
[SRA]
>SRA1001678
SRR001080.22383
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
10
86
+
Ile
GAT
[SRA]
>SRA1001679
SRR001080.23330
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
25
107
+
Leu
TAA
[SRA]
>SRA1001680
SRR001080.31693
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
82
6
-
Arg
TCT
[SRA]
>SRA1001681
SRR001080.35625
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
88
17
-
Asn
GTT
[SRA]
>SRA1001674
SRR001080.4567
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
101
27
-
Ile
GAT
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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