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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>SRA1001668
SRR001078.11982
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
49
125
+
Gly
GCC
[SRA]
>SRA1001669
SRR001078.23870
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
43
118
+
Lys
TTT
[SRA]
>SRA1001670
SRR001078.37289
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
115
39
-
His
GTG
[SRA]
>SRA1001666
SRR001078.402
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
1
75
+
Ala
GGC
[SRA]
>SRA1001667
SRR001078.834
Coral Stressors, viral fraction from whole Porites compressa tissue extracts; an aquarium control experiment (SRP000166)
29
105
+
Asp
GTC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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