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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Cyanobacteriota
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PL171000025
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50074
49998
-
Pseudo
GTG
[Ensembl]
¡û
>PL171000024
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50154
50080
-
Ala
TGC
[Ensembl]
¡û
>PL171000023
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50232
50160
-
Arg
TCT
[Ensembl]
¡û
>PL171000022
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50314
50239
-
Val
TAC
[Ensembl]
¡û
>PL171000021
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50390
50319
-
Gly
TCC
[Ensembl]
¡û
>PL171000020
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50470
50399
-
Thr
TGT
[Ensembl]
¡û
>PL171000019
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50627
50553
-
Leu
TAA
[Ensembl]
¡û
>PL171000018
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50709
50634
-
Lys
TTT
[Ensembl]
¡û
>PL171000017
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
50923
50849
-
Leu
TAG
[Ensembl]
¡û
>PL171000016
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51003
50927
-
Pro
TGG
[Ensembl]
¡û
>PL171000015
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51089
51012
-
Leu
CAA
[Ensembl]
¡û
>PL171000014
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51193
51117
-
Gln
TTG
[Ensembl]
¡û
>PL171000013
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51274
51198
-
Gln
CTG
[Ensembl]
¡û
>PL171000012
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51354
51280
-
Asn
GTT
[Ensembl]
¡û
>PL171000011
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51437
51363
-
Phe
GAA
[Ensembl]
¡û
>PL171000010
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51516
51440
-
Arg
ACG
[Ensembl]
¡û
>PL171000009
AP003604
Cyanobacteria
Nostoc sp. PCC 7120 plasmid:pCC7120delta
51700
51614
-
Tyr
GTA
[Ensembl]
¡û
>PL201000879
CP051207
Cyanobacteriota
Dolichospermum flos-aquae CCAP 1403/13F CCAP 1403/13f plasmid:pAfl69 [CP051207]
1000
926
-
Leu
CAA
[ENA]
¡û
>PL201000714
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
35597
35674
+
Asp
GTC
[ENA]
¡û
>PL201000715
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
35756
35831
+
Arg
CCG
[ENA]
¡û
>PL201000716
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
35837
35910
+
Cys
GCA
[ENA]
¡û
>PL201000717
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
35916
35990
+
Ile2
CAT
[ENA]
¡û
>PL201000718
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
35993
36065
+
Trp
CCA
[ENA]
¡û
>PL201000719
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36070
36145
+
Glu
TTC
[ENA]
¡û
>PL201000720
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36327
36402
+
Arg
ACG
[ENA]
¡û
>PL201000721
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36407
36481
+
Phe
GAA
[ENA]
¡û
>PL201000722
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36490
36564
+
Asn
GTT
[ENA]
¡û
>PL201000723
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36652
36726
+
Gln
TTG
[ENA]
¡û
>PL201000724
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36731
36806
+
Pro
TGG
[ENA]
¡û
>PL201000725
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36811
36885
+
Lys
TTT
[ENA]
¡û
>PL201000726
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
36969
37043
+
Leu
TAA
[ENA]
¡û
>PL201000727
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37053
37126
+
Thr
TGT
[ENA]
¡û
>PL201000728
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37132
37202
+
Gly
TCC
[ENA]
¡û
>PL201000729
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37208
37283
+
Val
TAC
[ENA]
¡û
>PL201000730
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37290
37363
+
Arg
TCT
[ENA]
¡û
>PL201000731
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37368
37442
+
Ala
TGC
[ENA]
¡û
>PL201000732
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37448
37523
+
His
GTG
[ENA]
¡û
>PL201000733
CP046707
Cyanobacteriota
Nostoc sp. ATCC 53789 plasmid:pNsp_d [CP046707]
37530
37614
+
Ser
TGA
[ENA]
¡û
>PL201000423
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87553
87469
-
Ser
TGA
[ENA]
¡û
>PL201000422
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87635
87560
-
His
GTG
[ENA]
¡û
>PL201000421
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87715
87641
-
Ala
TGC
[ENA]
¡û
>PL201000420
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87793
87720
-
Arg
TCT
[ENA]
¡û
>PL201000419
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87875
87800
-
Val
TAC
[ENA]
¡û
>PL201000418
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
87951
87880
-
Gly
TCC
[ENA]
¡û
>PL201000417
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88030
87957
-
Thr
TGT
[ENA]
¡û
>PL201000416
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88187
88111
-
Leu
TAA
[ENA]
¡û
>PL201000415
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88267
88193
-
Lys
CTT
[ENA]
¡û
>PL201000414
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88348
88274
-
Lys
TTT
[ENA]
¡û
>PL201000413
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88429
88355
-
Leu
TAG
[ENA]
¡û
>PL201000412
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88509
88433
-
Pro
TGG
[ENA]
¡û
>PL201000411
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88588
88511
-
Leu
CAA
[ENA]
¡û
>PL201000410
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88671
88597
-
Gln
TTG
[ENA]
¡û
>PL201000409
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88751
88677
-
Asn
GTT
[ENA]
¡û
>PL201000408
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88834
88760
-
Phe
GAA
[ENA]
¡û
>PL201000407
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88914
88839
-
Arg
ACG
[ENA]
¡û
>PL201000406
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89279
89208
-
Sup
CTA
[ENA]
¡û
>PL201000405
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89376
89304
-
Trp
CCA
[ENA]
¡û
>PL201000404
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89453
89379
-
Ile2
CAT
[ENA]
¡û
>PL201000403
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89532
89459
-
Cys
GCA
[ENA]
¡û
>PL201000402
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89613
89538
-
Arg
CCG
[ENA]
¡û
>PL201000401
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
89772
89695
-
Asp
GTC
[ENA]
¡û
>PL201000443
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
3663
3579
-
Ser
TGA
[ENA]
¡û
>PL201000442
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
3745
3670
-
His
GTG
[ENA]
¡û
>PL201000441
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
3825
3751
-
Ala
TGC
[ENA]
¡û
>PL201000440
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
3903
3830
-
Arg
TCT
[ENA]
¡û
>PL201000439
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
3985
3910
-
Val
TAC
[ENA]
¡û
>PL201000438
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4061
3991
-
Gly
TCC
[ENA]
¡û
>PL201000437
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4139
4067
-
Thr
TGT
[ENA]
¡û
>PL201000436
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4223
4149
-
Leu
TAA
[ENA]
¡û
>PL201000435
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4300
4226
-
Lys
TTT
[ENA]
¡û
>PL201000434
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4380
4305
-
Pro
TGG
[ENA]
¡û
>PL201000433
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4459
4385
-
Gln
TTG
[ENA]
¡û
>PL201000432
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4621
4547
-
Asn
GTT
[ENA]
¡û
>PL201000431
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4704
4630
-
Phe
GAA
[ENA]
¡û
>PL201000430
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
4784
4709
-
Arg
ACG
[ENA]
¡û
>PL201000429
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5145
5074
-
Lys
CTT
[ENA]
¡û
>PL201000428
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5242
5170
-
Trp
CCA
[ENA]
¡û
>PL201000427
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5319
5245
-
Ile2
CAT
[ENA]
¡û
>PL201000426
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5398
5325
-
Cys
GCA
[ENA]
¡û
>PL201000425
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5479
5404
-
Arg
CCG
[ENA]
¡û
>PL201000424
CP040290
Cyanobacteriota
Nostoc sp. C057 plasmid:p057_I [CP040290]
5638
5561
-
Asp
GTC
[ENA]
¡û
>PL201000459
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
41697
41613
-
Ser
TGA
[ENA]
¡û
>PL201000458
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
41779
41703
-
His
GTG
[ENA]
¡û
>PL201000457
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
41859
41786
-
Ala
TGC
[ENA]
¡û
>PL201000456
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
41936
41864
-
Arg
TCT
[ENA]
¡û
>PL203000055
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42095
42023
-
Gly
GCC
[ENA]
¡û
>PL201000455
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42290
42217
-
Thr
TGT
[ENA]
¡û
>PL201000454
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42462
42387
-
Leu
TAA
[ENA]
¡û
>PL201000453
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42542
42468
-
Lys
CTT
[ENA]
¡û
>PL201000452
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42623
42548
-
Lys
TTT
[ENA]
¡û
>PL201000451
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42703
42628
-
Pro
TGG
[ENA]
¡û
>PL201000450
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42865
42788
-
Leu
CAA
[ENA]
¡û
>PL201000449
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
42945
42869
-
Gln
TTG
[ENA]
¡û
>PL201000448
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43125
43051
-
Asn
GTT
[ENA]
¡û
>PL203000053
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43208
43134
-
Phe
GAA
[ENA]
¡û
>PL201000447
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43288
43214
-
Arg
ACG
[ENA]
¡û
>PL201000446
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43657
43584
-
Trp
CCA
[ENA]
¡û
>PL201000445
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43837
43763
-
Cys
GCA
[ENA]
¡û
>PL201000444
CP040298
Cyanobacteriota
Nostoc sp. TCL26-01 plasmid:pTCL26-01_A [CP040298]
43999
43922
-
Asp
GTC
[ENA]
¡û
>PL201000861
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
21891
21817
-
Ala
TGC
[ENA]
¡û
>PL201000860
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
21970
21895
-
Arg
TCT
[ENA]
¡û
>PL201000859
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22050
21977
-
Val
TAC
[ENA]
¡û
>PL201000858
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22126
22056
-
Gly
TCC
[ENA]
¡û
>PL201000857
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22285
22211
-
Gln
TTG
[ENA]
¡û
>PL201000856
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22364
22290
-
Asn
GTT
[ENA]
¡û
>PL203000100
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22532
22456
-
Arg
ACG
[ENA]
¡û
>PL201000855
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22894
22823
-
Lys
CTT
[ENA]
¡û
>PL201000854
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
22992
22919
-
Trp
CCA
[ENA]
¡û
>PL201000853
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
23069
22995
-
Ile2
CAT
[ENA]
¡û
>PL201000852
CP050441
Cyanobacteriota
Tolypothrix sp. PCC 7910 plasmid:unnamed1 [CP050441]
23232
23156
-
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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