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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Deinococcus-Thermus
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PL191000746
CP029777
Deinococcus-Thermus
Deinococcus actinosclerus SJTR plasmid:unnamed3 (CP029777)
73977
74052
+
Gly
GCC
[ENA]
¡û
>PL191000250
CP021084
Deinococcus-Thermus
Deinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
304217
304293
+
Cys
GCA
[ENA]
¡û
>PL191000251
CP021084
Deinococcus-Thermus
Deinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
304298
304374
+
Glu
TTC
[ENA]
¡û
>PL191000252
CP021084
Deinococcus-Thermus
Deinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
304379
304453
+
Asp
GTC
[ENA]
¡û
>PL191000253
CP021084
Deinococcus-Thermus
Deinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
304491
304564
+
His
GTG
[ENA]
¡û
>PL191000254
CP021084
Deinococcus-Thermus
Deinococcus ficus CC-FR2-10 plasmid:pDFI3 (CP021084)
304569
304645
+
Pro
TGG
[ENA]
¡û
>PL171000369
CP002192
Deinococcus-Thermus
Deinococcus gobiensis I-0 plasmid:P1
129819
129743
-
Met
CAT
[ENA]
¡û
>PL191000843
CP031159
Deinococcus-Thermus
Deinococcus wulumuqiensis NEB 479 plasmid:pDrdA (CP031159)
152328
152252
-
Met
CAT
[ENA]
¡û
>PL171000824
CP010825
Deinococcus-Thermus
Thermus aquaticus Y51MC23 plasmid:pTA69
52749
52674
-
Trp
CCA
[ENA]
¡û
>PL171000823
CP010825
Deinococcus-Thermus
Thermus aquaticus Y51MC23 plasmid:pTA69
57523
57448
-
Trp
CCA
[ENA]
¡û
>PL171000507
CP003251
Deinococcus-Thermus
Thermus oshimai JL-2 plasmid:pTHEOS02
6069
6144
+
Trp
CCA
[ENA]
¡û
>PL171000508
CP003254
Deinococcus-Thermus
Thermus thermophilus JL-18 plasmid:pTTJL1802
5213
5288
+
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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