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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
Dictyoglomota
Bacteria
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C09104320
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
349971
349885
-
Leu
CAG
[Ensembl]
¡û
>C09104275
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
631072
631147
+
Gln
TTG
[Ensembl]
¡û
>C09104319
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
685170
685096
-
Ala
CGC
[Ensembl]
¡û
>C09104318
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
726701
726626
-
Met
CAT
[Ensembl]
¡û
>C09104276
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
726813
726900
+
Leu
TAA
[Ensembl]
¡û
>C09104277
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
752888
752963
+
Phe
GAA
[Ensembl]
¡û
>C09104278
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
753054
753130
+
Arg
CCT
[Ensembl]
¡û
>C09104317
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
758205
758129
-
Arg
CCG
[Ensembl]
¡û
>C09104316
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
816827
816752
-
Glu
CTC
[Ensembl]
¡û
>C09104315
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
816912
816838
-
Gln
CTG
[Ensembl]
¡û
>C09104279
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
875693
875767
+
Val
GAC
[Ensembl]
¡û
>C09104280
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
917150
917224
+
Gly
CCC
[Ensembl]
¡û
>C09104281
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
917244
917319
+
Cys
GCA
[Ensembl]
¡û
>C09104282
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
917339
917413
+
Ala
GGC
[Ensembl]
¡û
>C09104283
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
920727
920803
+
Arg
ACG
[Ensembl]
¡û
>C09104284
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940094
940171
+
Pro
TGG
[Ensembl]
¡û
>C09104285
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940187
940261
+
Gly
TCC
[Ensembl]
¡û
>C09104286
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940280
940356
+
Arg
TCG
[Ensembl]
¡û
>C09104287
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940381
940457
+
His
GTG
[Ensembl]
¡û
>C09104288
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940471
940547
+
Arg
TCT
[Ensembl]
¡û
>C09104289
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940553
940628
+
Lys
CTT
[Ensembl]
¡û
>C09104290
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940634
940717
+
Leu
TAG
[Ensembl]
¡û
>C09104291
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
940741
940815
+
Gly
GCC
[Ensembl]
¡û
>C09104292
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1015863
1015950
+
Leu
GAG
[Ensembl]
¡û
>C09104314
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1077165
1077090
-
Ala
TGC
[Ensembl]
¡û
>C09104313
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1077264
1077188
-
Ile
GAT
[Ensembl]
¡û
>C09104312
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1081977
1081886
-
Ser
GGA
[Ensembl]
¡û
>C09104311
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1114832
1114757
-
Val
CAC
[Ensembl]
¡û
>C09104310
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1114939
1114865
-
Met
CAT
[Ensembl]
¡û
>C09104293
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1137933
1138008
+
Lys
TTT
[Ensembl]
¡û
>C09104294
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1138017
1138094
+
Glu
TTC
[Ensembl]
¡û
>C09104295
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1138100
1138175
+
Val
TAC
[Ensembl]
¡û
>C09104296
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1138203
1138281
+
Asp
GTC
[Ensembl]
¡û
>C09104297
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1138628
1138702
+
Thr
CGT
[Ensembl]
¡û
>C09104309
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1208798
1208722
-
Trp
CCA
[Ensembl]
¡û
>C09104308
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1210352
1210277
-
Thr
GGT
[Ensembl]
¡û
>C09104307
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1210434
1210358
-
Met
CAT
[Ensembl]
¡û
>C09104306
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1210527
1210442
-
Tyr
GTA
[Ensembl]
¡û
>C09104305
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1210613
1210539
-
Thr
TGT
[Ensembl]
¡û
>C09104298
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1222001
1222090
+
Leu
CAA
[Ensembl]
¡û
>C09104304
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1231006
1230930
-
Pro
CGG
[Ensembl]
¡û
>C09104303
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1231090
1231016
-
Pro
GGG
[Ensembl]
¡û
>C09104302
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1429987
1429893
-
Ser
GCT
[Ensembl]
¡û
>C09104301
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1470330
1470241
-
Ser
TGA
[Ensembl]
¡û
>C09104299
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1528387
1528473
+
Ser
CGA
[Ensembl]
¡û
>C09104300
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1649377
1649451
+
Asn
GTT
[Ensembl]
¡û
>C09104366
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
460934
460848
-
Leu
CAG
[Ensembl]
¡û
>C09104321
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
803043
803118
+
Gln
TTG
[Ensembl]
¡û
>C09104365
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
857078
857004
-
Ala
CGC
[Ensembl]
¡û
>C09104364
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
897598
897523
-
Met
CAT
[Ensembl]
¡û
>C09104322
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
897709
897796
+
Leu
TAA
[Ensembl]
¡û
>C09104323
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
924320
924395
+
Phe
GAA
[Ensembl]
¡û
>C09104324
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
924489
924565
+
Arg
CCT
[Ensembl]
¡û
>C09104363
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
929638
929562
-
Arg
CCG
[Ensembl]
¡û
>C09104325
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
984342
984416
+
Gln
CTG
[Ensembl]
¡û
>C09104326
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
984426
984501
+
Glu
CTC
[Ensembl]
¡û
>C09104327
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1043075
1043149
+
Val
GAC
[Ensembl]
¡û
>C09104328
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1084193
1084267
+
Gly
CCC
[Ensembl]
¡û
>C09104329
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1084280
1084355
+
Cys
GCA
[Ensembl]
¡û
>C09104330
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1084375
1084449
+
Ala
GGC
[Ensembl]
¡û
>C09104331
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1087768
1087844
+
Arg
ACG
[Ensembl]
¡û
>C09104332
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107116
1107193
+
Pro
TGG
[Ensembl]
¡û
>C09104333
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107209
1107283
+
Gly
TCC
[Ensembl]
¡û
>C09104334
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107317
1107393
+
Arg
TCG
[Ensembl]
¡û
>C09104335
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107419
1107495
+
His
GTG
[Ensembl]
¡û
>C09104336
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107508
1107584
+
Arg
TCT
[Ensembl]
¡û
>C09104337
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107590
1107665
+
Lys
CTT
[Ensembl]
¡û
>C09104338
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107671
1107754
+
Leu
TAG
[Ensembl]
¡û
>C09104339
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1107776
1107850
+
Gly
GCC
[Ensembl]
¡û
>C09104340
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1182891
1182978
+
Leu
GAG
[Ensembl]
¡û
>C09104362
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1244053
1243978
-
Ala
TGC
[Ensembl]
¡û
>C09104361
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1244153
1244077
-
Ile
GAT
[Ensembl]
¡û
>C09104360
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1248865
1248774
-
Ser
GGA
[Ensembl]
¡û
>C09104359
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1278155
1278080
-
Val
CAC
[Ensembl]
¡û
>C09104358
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1278258
1278184
-
Met
CAT
[Ensembl]
¡û
>C09104341
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1301230
1301305
+
Lys
TTT
[Ensembl]
¡û
>C09104342
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1301313
1301390
+
Glu
TTC
[Ensembl]
¡û
>C09104343
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1301397
1301472
+
Val
TAC
[Ensembl]
¡û
>C09104344
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1318866
1318944
+
Asp
GTC
[Ensembl]
¡û
>C09104345
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1319063
1319137
+
Thr
CGT
[Ensembl]
¡û
>C09104357
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1389103
1389027
-
Trp
CCA
[Ensembl]
¡û
>C09104356
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1390658
1390583
-
Thr
GGT
[Ensembl]
¡û
>C09104355
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1390740
1390664
-
Met
CAT
[Ensembl]
¡û
>C09104354
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1390835
1390750
-
Tyr
GTA
[Ensembl]
¡û
>C09104353
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1390917
1390843
-
Thr
TGT
[Ensembl]
¡û
>C09104346
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1402264
1402353
+
Leu
CAA
[Ensembl]
¡û
>C09104352
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1411265
1411189
-
Pro
CGG
[Ensembl]
¡û
>C09104351
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1411350
1411276
-
Pro
GGG
[Ensembl]
¡û
>C09104350
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1614889
1614795
-
Ser
GCT
[Ensembl]
¡û
>C09104349
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1655183
1655094
-
Ser
TGA
[Ensembl]
¡û
>C09104347
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1711446
1711532
+
Ser
CGA
[Ensembl]
¡û
>C09104348
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1838483
1838557
+
Asn
GTT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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