This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
Fibrobacterota
Bacteria
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C10106874
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
66403
66476
+
Arg
ACG
-
¡û
>C10106921
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
105746
105674
-
Lys
TTT
-
¡û
>C10106875
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
271103
271179
+
Pro
CGG
-
¡û
>C10106876
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
291033
291108
+
Ala
GGC
-
¡û
>C10300107
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
515818
515742
-
Pro
GGG
-
¡û
>C10106877
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
527228
527311
+
Leu
CAA
-
¡û
>C10106878
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
583158
583233
+
Gly
CCC
-
¡û
>C10106920
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
668430
668357
-
Arg
TCT
-
¡û
>C10300098
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
706769
706847
+
Asp
GTC
-
¡û
>C10106879
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
717825
717898
+
Ala
CGC
-
¡û
>C10106919
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
785579
785507
-
Ala
TGC
-
¡û
>C10106918
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
785659
785585
-
Ile
GAT
-
¡û
>C10106880
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
970276
970348
+
Gly
TCC
-
¡û
>C10106917
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1542498
1542409
-
Ser
GCT
-
¡û
>C10106916
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1579624
1579551
-
Trp
CCA
-
¡û
>C10300106
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1581081
1581009
-
Thr
GGT
-
¡û
>C10106915
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1581206
1581121
-
Tyr
GTA
-
¡û
>C10106914
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1581288
1581216
-
Thr
TGT
-
¡û
>C10106913
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1717706
1717627
-
Leu
TAG
-
¡û
>C10106912
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1753607
1753534
-
Met
CAT
-
¡û
>C10106881
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1789279
1789353
+
Ile
GAT
-
¡û
>C10106882
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1789359
1789431
+
Ala
TGC
-
¡û
>C10106911
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1927811
1927737
-
Val
CAC
-
¡û
>C10106910
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
1983065
1982989
-
His
GTG
-
¡û
>C10106909
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2314275
2314204
-
Arg
CCG
-
¡û
>C10106908
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2348690
2348608
-
Ser
TGA
-
¡û
>C10106907
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2350191
2350116
-
Phe
GAA
-
¡û
>C10106906
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2369312
2369228
-
Leu
TAA
-
¡û
>C10106883
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2374255
2374339
+
Leu
CAG
-
¡û
>C10106884
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2382801
2382875
+
Ile
GAT
-
¡û
>C10106885
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2382881
2382953
+
Ala
TGC
-
¡û
>C10106886
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2390293
2390377
+
Ser
CGA
-
¡û
>C10106905
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2391120
2391048
-
Glu
TTC
-
¡û
>C10106904
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2391589
2391517
-
Glu
TTC
-
¡û
>C10106887
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2397749
2397822
+
Cys
GCA
-
¡û
>C10300105
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2503538
2503464
-
Val
GAC
-
¡û
>C10106903
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2552268
2552192
-
Met
CAT
-
¡û
>C10300104
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2606684
2606609
-
Gly
GCC
-
¡û
>C10300103
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2607144
2607069
-
Gly
GCC
-
¡û
>C10300102
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2607529
2607454
-
Gly
GCC
-
¡û
>C10106902
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2655437
2655362
-
Thr
CGT
-
¡û
>C10106888
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2798016
2798089
+
Gln
CTG
-
¡û
>C10106901
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2913147
2913064
-
Leu
GAG
-
¡û
>C10106900
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2913384
2913301
-
Leu
GAG
-
¡û
>C10106889
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2945724
2945797
+
Asn
GTT
-
¡û
>C10106890
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
2945926
2945999
+
Asn
GTT
-
¡û
>C10106891
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3016336
3016409
+
Gln
TTG
-
¡û
>C10106892
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3238551
3238623
+
Arg
CCT
-
¡û
>C10106893
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3413938
3414010
+
Glu
CTC
-
¡û
>C10300100
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3442309
3442233
-
Asp
GTC
-
¡û
>C10106899
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3442409
3442332
-
Val
TAC
-
¡û
>C10300099
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3442873
3442795
-
Asp
GTC
-
¡û
>C10106894
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3482719
3482794
+
Pro
TGG
-
¡û
>C10106898
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3571715
3571628
-
Ser
GGA
-
¡û
>C10106895
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3825284
3825359
+
Lys
CTT
-
¡û
>C10106896
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3825487
3825562
+
Lys
CTT
-
¡û
>C10106897
CP001792
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP001792]
3825711
3825786
+
Lys
CTT
-
¡û
>C10106922
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
17848
17920
+
Glu
CTC
-
¡û
>C10300117
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
46219
46143
-
Asp
GTC
-
¡û
>C10106969
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
46319
46242
-
Val
TAC
-
¡û
>C10300116
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
46783
46705
-
Asp
GTC
-
¡û
>C10106923
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
86629
86704
+
Pro
TGG
-
¡û
>C10106968
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
175626
175539
-
Ser
GGA
-
¡û
>C10106924
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
429199
429274
+
Lys
CTT
-
¡û
>C10106925
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
429402
429477
+
Lys
CTT
-
¡û
>C10106926
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
429626
429701
+
Lys
CTT
-
¡û
>C10106927
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
512954
513027
+
Arg
ACG
-
¡û
>C10106967
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
552298
552226
-
Lys
TTT
-
¡û
>C10106928
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
717794
717870
+
Pro
CGG
-
¡û
>C10106929
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
737725
737800
+
Ala
GGC
-
¡û
>C10300115
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
962510
962434
-
Pro
GGG
-
¡û
>C10106930
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
973921
974004
+
Leu
CAA
-
¡û
>C10106931
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1029851
1029926
+
Gly
CCC
-
¡û
>C10106966
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1115121
1115048
-
Arg
TCT
-
¡û
>C10300108
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1153461
1153539
+
Asp
GTC
-
¡û
>C10106932
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1164547
1164620
+
Ala
CGC
-
¡û
>C10106965
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1232300
1232228
-
Ala
TGC
-
¡û
>C10106964
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1232380
1232306
-
Ile
GAT
-
¡û
>C10106933
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1416996
1417068
+
Gly
TCC
-
¡û
>C10106963
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
1989214
1989125
-
Ser
GCT
-
¡û
>C10106962
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2026339
2026266
-
Trp
CCA
-
¡û
>C10300114
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2027796
2027724
-
Thr
GGT
-
¡û
>C10106961
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2027921
2027836
-
Tyr
GTA
-
¡û
>C10106960
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2028003
2027931
-
Thr
TGT
-
¡û
>C10106959
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2164428
2164349
-
Leu
TAG
-
¡û
>C10106958
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2200330
2200257
-
Met
CAT
-
¡û
>C10106934
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2236003
2236077
+
Ile
GAT
-
¡û
>C10106935
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2236083
2236155
+
Ala
TGC
-
¡û
>C10106957
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2374535
2374461
-
Val
CAC
-
¡û
>C10106956
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2429789
2429713
-
His
GTG
-
¡û
>C10106955
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2761004
2760933
-
Arg
CCG
-
¡û
>C10106954
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2795419
2795337
-
Ser
TGA
-
¡û
>C10106953
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2796920
2796845
-
Phe
GAA
-
¡û
>C10106952
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2816041
2815957
-
Leu
TAA
-
¡û
>C10106936
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2820984
2821068
+
Leu
CAG
-
¡û
>C10106937
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2829530
2829604
+
Ile
GAT
-
¡û
>C10106938
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2829610
2829682
+
Ala
TGC
-
¡û
>C10106939
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2837023
2837107
+
Ser
CGA
-
¡û
>C10106951
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2837850
2837778
-
Glu
TTC
-
¡û
>C10106950
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2838320
2838248
-
Glu
TTC
-
¡û
>C10106940
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2844480
2844553
+
Cys
GCA
-
¡û
>C10300113
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2950458
2950384
-
Val
GAC
-
¡û
>C10106949
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
2999186
2999110
-
Met
CAT
-
¡û
>C10300112
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3053602
3053527
-
Gly
GCC
-
¡û
>C10300111
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3054062
3053987
-
Gly
GCC
-
¡û
>C10300110
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3054447
3054372
-
Gly
GCC
-
¡û
>C10106948
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3102354
3102279
-
Thr
CGT
-
¡û
>C10106941
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3244934
3245007
+
Gln
CTG
-
¡û
>C10106947
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3360067
3359984
-
Leu
GAG
-
¡û
>C10106946
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3360304
3360221
-
Leu
GAG
-
¡û
>C10106942
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3392645
3392718
+
Asn
GTT
-
¡û
>C10106943
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3392847
3392920
+
Asn
GTT
-
¡û
>C10106944
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3463256
3463329
+
Gln
TTG
-
¡û
>C10106945
CP002158
Fibrobacterota
Fibrobacter succinogenes subsp. succinogenes S85 [CP002158]
3685467
3685539
+
Arg
CCT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK