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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Fusobacteria
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PL171000974
CP013332
Fusobacteria
Fusobacterium hwasookii ChDC F174 plasmid:unnamed1
15269
15183
-
Leu
CAA
[ENA]
¡û
>PL171000412
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
74221
74296
+
Asn
GTT
[ENA]
¡û
>PL171000413
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
81935
82010
+
Lys
TTT
[ENA]
¡û
>PL171000414
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
82018
82101
+
Leu
TAG
[ENA]
¡û
>PL171000415
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
99588
99663
+
Thr
GGT
[ENA]
¡û
>PL171000416
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245233
245308
+
Gly
TCC
[ENA]
¡û
>PL171000417
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245314
245389
+
His
GTG
[ENA]
¡û
>PL171000418
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245398
245472
+
Glu
TTC
[ENA]
¡û
>PL171000419
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245478
245562
+
Tyr
GTA
[ENA]
¡û
>PL171000420
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245584
245660
+
Asp
GTC
[ENA]
¡û
>PL171000421
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245683
245758
+
Thr
TGT
[ENA]
¡û
>PL171000422
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245766
245841
+
Gly
TCC
[ENA]
¡û
>PL171000423
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245846
245920
+
Glu
TTC
[ENA]
¡û
>PL171000424
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245929
246004
+
Val
TAC
[ENA]
¡û
>PL171000425
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
246025
246101
+
Asp
GTC
[ENA]
¡û
>PL171000426
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
246125
246200
+
Thr
TGT
[ENA]
¡û
>PL171000427
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
246208
246291
+
Leu
TAG
[ENA]
¡û
>PL171000445
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
271862
271777
-
Leu
GAG
[ENA]
¡û
>PL171000444
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
271956
271870
-
Leu
GAG
[ENA]
¡û
>PL171000443
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
712480
712387
-
SeC(p)
TCA
[ENA]
¡û
>PL171000442
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
883367
883291
-
Arg
CCT
[ENA]
¡û
>PL171000428
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
885629
885704
+
Ala
TGC
[ENA]
¡û
>PL171000429
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
885712
885788
+
Met
CAT
[ENA]
¡û
>PL171000441
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919510
919434
-
Met
CAT
[ENA]
¡û
>PL171000440
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919596
919521
-
Ala
GGC
[ENA]
¡û
>PL171000439
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919697
919613
-
Tyr
GTA
[ENA]
¡û
>PL171000438
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919777
919703
-
Glu
TTC
[ENA]
¡û
>PL171000437
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919858
919783
-
Val
TAC
[ENA]
¡û
>PL171000436
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919940
919866
-
Glu
TTC
[ENA]
¡û
>PL171000435
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
920020
919945
-
Gly
TCC
[ENA]
¡û
>PL171000434
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
920103
920028
-
Thr
TGT
[ENA]
¡û
>PL171000433
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
920184
920109
-
Lys
TTT
[ENA]
¡û
>PL171000432
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
942839
942765
-
Gln
TTG
[ENA]
¡û
>PL171000431
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
942933
942858
-
Lys
TTT
[ENA]
¡û
>PL171000430
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
943013
942937
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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