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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Haptophyceae
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>CHL1810057819
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
3359
3287
-
Phe
GAA
[ENA]
¡û
>CHL1810057818
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
7740
7667
-
His
GTG
[ENA]
¡û
>CHL1810057817
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
39565
39492
-
Asp
GTC
[ENA]
¡û
>CHL1810057795
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
40754
40835
+
Tyr
GTA
[ENA]
¡û
>CHL1810057796
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
44888
44963
+
Met
CAT
[ENA]
¡û
>CHL1810057797
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
48911
48981
+
Gly
TCC
[ENA]
¡û
>CHL1830002517
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
50445
50371
-
Glu
TTC
[ENA]
¡û
>CHL1810057816
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
55119
55045
-
Arg
TCT
[ENA]
¡û
>CHL1810057815
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
55257
55186
-
Val
TAC
[ENA]
¡û
>CHL1810057798
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
57218
57302
+
Met
CAT
[ENA]
¡û
>CHL1810057814
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
57417
57345
-
Arg
CCG
[ENA]
¡û
>CHL1810057813
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
62190
62105
-
Ser
TGA
[ENA]
¡û
>CHL1810057812
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
62345
62272
-
Arg
ACG
[ENA]
¡û
>CHL1810057811
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
62488
62415
-
Gln
TTG
[ENA]
¡û
>CHL1810057810
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
67150
67076
-
Ala
TGC
[ENA]
¡û
>CHL1810057809
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
73730
73656
-
Thr
TGT
[ENA]
¡û
>CHL1810057799
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
78513
78584
+
Lys
TTT
[ENA]
¡û
>CHL1810057800
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
83472
83544
+
Cys
GCA
[ENA]
¡û
>CHL1810057801
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
83558
83642
+
Leu
TAA
[ENA]
¡û
>CHL1810057808
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
84349
84267
-
Leu
TAG
[ENA]
¡û
>CHL1810057802
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
87147
87220
+
Gly
GCC
[ENA]
¡û
>CHL1810057803
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
87367
87440
+
Asn
GTT
[ENA]
¡û
>CHL1810057804
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
92779
92853
+
Trp
CCA
[ENA]
¡û
>CHL1810057805
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
92911
93000
+
Ser
GCT
[ENA]
¡û
>CHL1810057807
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
94683
94610
-
Pro
TGG
[ENA]
¡û
>CHL1810057806
MG520331
Haptophyceae
Chrysochromulina parva (MG520331)
101333
101408
+
Ile
GAT
[ENA]
¡û
>CHL090101596
AY741371
Haptophyceae
Emiliania huxleyi
1614
1690
+
Ile
GAT
[ENA]
¡û
>CHL090101597
AY741371
Haptophyceae
Emiliania huxleyi
1693
1766
+
Ala
TGC
[ENA]
¡û
>CHL090101622
AY741371
Haptophyceae
Emiliania huxleyi
11070
11000
-
Gly
TCC
[ENA]
¡û
>CHL090101621
AY741371
Haptophyceae
Emiliania huxleyi
19173
19100
-
Ala
TGC
[ENA]
¡û
>CHL090101620
AY741371
Haptophyceae
Emiliania huxleyi
19252
19176
-
Ile
GAT
[ENA]
¡û
>CHL090101619
AY741371
Haptophyceae
Emiliania huxleyi
26018
25944
-
Thr
TGT
[ENA]
¡û
>CHL090200076
AY741371
Haptophyceae
Emiliania huxleyi
30457
30382
-
Met
CAT
[ENA]
¡û
>CHL090101618
AY741371
Haptophyceae
Emiliania huxleyi
38731
38658
-
Asn
GTT
[ENA]
¡û
>CHL090101617
AY741371
Haptophyceae
Emiliania huxleyi
38902
38830
-
Gly
GCC
[ENA]
¡û
>CHL090101598
AY741371
Haptophyceae
Emiliania huxleyi
41464
41547
+
Leu
TAG
[ENA]
¡û
>CHL090101616
AY741371
Haptophyceae
Emiliania huxleyi
42133
42052
-
Leu
TAA
[ENA]
¡û
>CHL090101615
AY741371
Haptophyceae
Emiliania huxleyi
42207
42135
-
Cys
GCA
[ENA]
¡û
>CHL090101614
AY741371
Haptophyceae
Emiliania huxleyi
42386
42312
-
Phe
GAA
[ENA]
¡û
>CHL090101599
AY741371
Haptophyceae
Emiliania huxleyi
45795
45868
+
Pro
TGG
[ENA]
¡û
>CHL090101613
AY741371
Haptophyceae
Emiliania huxleyi
47383
47295
-
Ser
GCT
[ENA]
¡û
>CHL090101612
AY741371
Haptophyceae
Emiliania huxleyi
47488
47414
-
Trp
CCA
[ENA]
¡û
>CHL090101611
AY741371
Haptophyceae
Emiliania huxleyi
48899
48826
-
His
GTG
[ENA]
¡û
>CHL090101600
AY741371
Haptophyceae
Emiliania huxleyi
64954
65026
+
Gln
TTG
[ENA]
¡û
>CHL090101601
AY741371
Haptophyceae
Emiliania huxleyi
65088
65161
+
Arg
ACG
[ENA]
¡û
>CHL090101610
AY741371
Haptophyceae
Emiliania huxleyi
65565
65478
-
Ser
TGA
[ENA]
¡û
>CHL090101602
AY741371
Haptophyceae
Emiliania huxleyi
70167
70241
+
Arg
CCG
[ENA]
¡û
>CHL090101609
AY741371
Haptophyceae
Emiliania huxleyi
70362
70276
-
Met
CAT
[ENA]
¡û
>CHL090101603
AY741371
Haptophyceae
Emiliania huxleyi
72314
72386
+
Val
TAC
[ENA]
¡û
>CHL090101604
AY741371
Haptophyceae
Emiliania huxleyi
72442
72514
+
Arg
TCT
[ENA]
¡û
>CHL090200075
AY741371
Haptophyceae
Emiliania huxleyi
76855
76927
+
Glu
TTC
[ENA]
¡û
>CHL090101608
AY741371
Haptophyceae
Emiliania huxleyi
84123
84050
-
Lys
TTT
[ENA]
¡û
>CHL090101605
AY741371
Haptophyceae
Emiliania huxleyi
84850
84925
+
Met
CAT
[ENA]
¡û
>CHL090101607
AY741371
Haptophyceae
Emiliania huxleyi
88736
88654
-
Tyr
GTA
[ENA]
¡û
>CHL090101606
AY741371
Haptophyceae
Emiliania huxleyi
104125
104052
-
Asp
GTC
[ENA]
¡û
>CHL1810008562
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
3109
3180
+
Lys
TTT
[ENA]
¡û
>CHL1810008563
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
19230
19301
+
Val
TAC
[ENA]
¡û
>CHL1810008586
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
19498
19416
-
Leu
TAG
[ENA]
¡û
>CHL1810008585
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
22331
22258
-
Met
CAT
[ENA]
¡û
>CHL1810008584
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
28720
28645
-
Asp
GTC
[ENA]
¡û
>CHL1810008583
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
30615
30531
-
Met
CAT
[ENA]
¡û
>CHL1810008582
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
38184
38111
-
His
GTG
[ENA]
¡û
>CHL1810008581
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
38323
38249
-
Pro
TGG
[ENA]
¡û
>CHL1810008580
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
38801
38718
-
Ser
TGA
[ENA]
¡û
>CHL1810008579
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
46018
45946
-
Trp
CCA
[ENA]
¡û
>CHL1810008564
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
61892
61963
+
Cys
GCA
[ENA]
¡û
>CHL1810008578
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
64920
64846
-
Thr
TGT
[ENA]
¡û
>CHL1810008577
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
65013
64942
-
Gly
TCC
[ENA]
¡û
>CHL1810008576
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
72651
72579
-
Asn
GTT
[ENA]
¡û
>CHL1810008565
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
77181
77262
+
Leu
CAA
[ENA]
¡û
>CHL1810008566
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
78856
78942
+
Ser
GCT
[ENA]
¡û
>CHL1810008575
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
80472
80400
-
Arg
TCT
[ENA]
¡û
>CHL1810008567
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
81964
82036
+
Gln
TTG
[ENA]
¡û
>CHL1810008574
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
82185
82112
-
Gly
GCC
[ENA]
¡û
>CHL1810008573
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
87170
87098
-
Phe
GAA
[ENA]
¡û
>CHL1810008568
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
89360
89444
+
Leu
TAA
[ENA]
¡û
>CHL1810008569
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
92357
92432
+
Arg
ACG
[ENA]
¡û
>CHL1810008570
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
92436
92518
+
Tyr
GTA
[ENA]
¡û
>CHL1810008571
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
95131
95208
+
Ile
GAT
[ENA]
¡û
>CHL1810008572
KC573041
Haptophyceae
Pavlova lutheri ATCC 50092 (KC573041)
95209
95281
+
Ala
TGC
[ENA]
¡û
>CHL1810009327
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
6266
6194
-
Thr
TGT
[ENA]
¡û
>CHL1810009303
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
11237
11308
+
Lys
TTT
[ENA]
¡û
>CHL1810009304
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
19308
19383
+
Met
CAT
[ENA]
¡û
>CHL1810009326
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
23342
23259
-
Tyr
GTA
[ENA]
¡û
>CHL1810009325
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
39570
39497
-
Asp
GTC
[ENA]
¡û
>CHL1810009305
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
41304
41377
+
Ile
GAT
[ENA]
¡û
>CHL1810009306
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
41381
41454
+
Ala
TGC
[ENA]
¡û
>CHL1810009307
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
50844
50917
+
Pro
TGG
[ENA]
¡û
>CHL1810009324
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
52464
52376
-
Ser
GCT
[ENA]
¡û
>CHL1810009323
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
52599
52527
-
Trp
CCA
[ENA]
¡û
>CHL1810009322
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
58852
58778
-
Asn
GTT
[ENA]
¡û
>CHL1810009308
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
59008
59081
+
Gly
GCC
[ENA]
¡û
>CHL1810009309
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
62312
62395
+
Leu
TAG
[ENA]
¡û
>CHL1810009321
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
63092
63007
-
Leu
TAA
[ENA]
¡û
>CHL1810009320
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
63173
63101
-
Cys
GCA
[ENA]
¡û
>CHL1810009310
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
63289
63359
+
Gly
TCC
[ENA]
¡û
>CHL1830000492
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
66298
66225
-
Glu
TTC
[ENA]
¡û
>CHL1810009319
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
70001
69927
-
Arg
TCT
[ENA]
¡û
>CHL1810009318
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
70103
70032
-
Val
TAC
[ENA]
¡û
>CHL1810009311
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
72246
72330
+
Met
CAT
[ENA]
¡û
>CHL1810009317
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
72446
72374
-
Arg
CCG
[ENA]
¡û
>CHL1810009312
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
77293
77366
+
Arg
ACG
[ENA]
¡û
>CHL1810009313
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
77471
77558
+
Ser
TGA
[ENA]
¡û
>CHL1810009316
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
78119
78048
-
Gln
TTG
[ENA]
¡û
>CHL1810009314
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
94020
94093
+
His
GTG
[ENA]
¡û
>CHL1810009315
KC900889
Haptophyceae
Phaeocystis globosa (KC900889)
98495
98569
+
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK