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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Herpesvirales
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>VRL181000540
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
4508
4586
+
Arg
CCT
[ENA]
¡û
>VRL181000541
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
8659
8731
+
Asp
GTC
[ENA]
¡û
>VRL181000542
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
11736
11806
+
Asp
GTC
[ENA]
¡û
>VRL181000544
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
139598
139527
-
Asp
GTC
[ENA]
¡û
>VRL181000543
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
146039
145961
-
Arg
CCT
[ENA]
¡û
>VRL181000448
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
4508
4586
+
Arg
CCT
[ENA]
¡û
>VRL181000449
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
8658
8730
+
Asp
GTC
[ENA]
¡û
>VRL181000450
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
11730
11800
+
Asp
GTC
[ENA]
¡û
>VRL181000452
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
139424
139353
-
Asp
GTC
[ENA]
¡û
>VRL181000451
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
145866
145788
-
Arg
CCT
[ENA]
¡û
>VRL0100045
AF105037
Herpesvirales
Murid herpesvirus 4
1182
1255
+
Met
CAT
[ENA]
¡û
>VRL0100046
AF105037
Herpesvirales
Murid herpesvirus 4
1588
1659
+
Thr
AGT
[ENA]
¡û
>VRL0100047
AF105037
Herpesvirales
Murid herpesvirus 4
5384
5460
+
Gly
GCC
[ENA]
¡û
>VRL0100064
U97553
Herpesvirales
Murid herpesvirus 4
1182
1255
+
Met
CAT
[ENA]
¡û
>VRL0100065
U97553
Herpesvirales
Murid herpesvirus 4
1588
1659
+
Thr
AGT
[ENA]
¡û
>VRL0100066
U97553
Herpesvirales
Murid herpesvirus 4
5384
5460
+
Gly
GCC
[ENA]
¡û
>VRL0100067
Y11705
Herpesvirales
Murid herpesvirus 4
1077
1150
+
Met
CAT
[ENA]
¡û
>VRL0100068
Y11705
Herpesvirales
Murid herpesvirus 4
1483
1554
+
Thr
AGT
[ENA]
¡û
>VRL0100069
Y11705
Herpesvirales
Murid herpesvirus 4
5279
5355
+
Gly
GCC
[ENA]
¡û
>VRL0100050
AF191073
Herpesvirales
Stealth virus 1
2292
2217
-
Ala
TGC
[ENA]
¡û
>VRL0100049
AF191073
Herpesvirales
Stealth virus 1
2483
2407
-
Ile
GAT
[ENA]
¡û
>VRL0100055
U27612
Herpesvirales
Stealth virus 1
6853
6777
-
Arg
CCT
[ENA]
¡û
>VRL181000001
EF495130
Herpesvirales
Wood mouse herpesvirus Brest/An711 (EF495130)
2563
2636
+
Met
CAT
[ENA]
¡û
>VRL181000002
EF495130
Herpesvirales
Wood mouse herpesvirus Brest/An711 (EF495130)
2969
3040
+
Thr
AGT
[ENA]
¡û
>VRL181000010
GQ169129
Herpesvirales
Wood mouse herpesvirus WM8 (GQ169129)
1088
1161
+
Met
CAT
[ENA]
¡û
>VRL181000011
GQ169129
Herpesvirales
Wood mouse herpesvirus WM8 (GQ169129)
1494
1565
+
Thr
AGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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