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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Hydrogenophilia
Bacteria
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C191003406
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
119294
119369
+
Arg
CCG
-
¡û
>C191003407
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
218900
218976
+
Ile
GAT
-
¡û
>C191003408
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
218984
219059
+
Ala
TGC
-
¡û
>C191003409
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
352132
352218
+
Leu
CAA
-
¡û
>C191003410
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
412168
412252
+
Tyr
GTA
-
¡û
>C191003411
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
412283
412356
+
Gly
TCC
-
¡û
>C191003412
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
412372
412446
+
Thr
GGT
-
¡û
>C191003413
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
413723
413798
+
Trp
CCA
-
¡û
>C191003414
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
447204
447280
+
Pro
CGG
-
¡û
>C191003415
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
467508
467583
+
Thr
CGT
-
¡û
>C191003416
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
467604
467696
+
Ser
CGA
-
¡û
>C191003417
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
523064
523140
+
Val
GAC
-
¡û
>C191003418
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
538410
538486
+
Pro
GGG
-
¡û
>C191003454
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
648231
648156
-
Lys
TTT
-
¡û
>C191003453
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
696440
696356
-
Leu
CAG
-
¡û
>C191003452
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
715670
715594
-
Met
CAT
-
¡û
>C191003419
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
743595
743685
+
Ser
GGA
-
¡û
>C191003420
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
743749
743824
+
Ala
GGC
-
¡û
>C191003421
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
743842
743917
+
Glu
TTC
-
¡û
>C191003422
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
743930
744006
+
Asp
GTC
-
¡û
>C191003423
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
744019
744094
+
Glu
TTC
-
¡û
>C191003424
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
744107
744183
+
Asp
GTC
-
¡û
>C191003451
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
771210
771122
-
Leu
TAA
-
¡û
>C191003425
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
908698
908774
+
Pro
TGG
-
¡û
>C191003426
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
908816
908892
+
Arg
TCT
-
¡û
>C191003427
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
908915
908990
+
His
GTG
-
¡û
>C191003428
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
983582
983654
+
Arg
CCT
-
¡û
>C191003429
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1093724
1093800
+
Ile
GAT
-
¡û
>C191003430
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1093808
1093883
+
Ala
TGC
-
¡û
>C191003450
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1190158
1190083
-
Val
TAC
-
¡û
>C191003431
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1216801
1216875
+
Val
CAC
-
¡û
>C191003432
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1216889
1216964
+
Ala
CGC
-
¡û
>C191003449
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1257190
1257106
-
Leu
GAG
-
¡û
>C191003448
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1446070
1445977
-
Ser
GCT
-
¡û
>C191003447
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1457906
1457830
-
Arg
ACG
-
¡û
>C191003446
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1516364
1516280
-
Leu
TAG
-
¡û
>C191003433
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1666529
1666604
+
Met
CAT
-
¡û
>C191003445
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1694459
1694384
-
Ala
TGC
-
¡û
>C191003444
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1694543
1694467
-
Ile
GAT
-
¡û
>C191003434
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1719908
1719983
+
Thr
TGT
-
¡û
>C191003435
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1784401
1784477
+
Met
CAT
-
¡û
>C191003443
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1807009
1806920
-
Ser
TGA
-
¡û
>C191003436
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1863735
1863811
+
Gln
TTG
-
¡û
>C191003437
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1956213
1956288
+
Phe
GAA
-
¡û
>C191003442
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1958817
1958742
-
Gly
GCC
-
¡û
>C191003441
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1958912
1958839
-
Cys
GCA
-
¡û
>C191003440
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
1958990
1958915
-
Gly
GCC
-
¡û
>C191003438
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
2137773
2137848
+
Asn
GTT
-
¡û
>C191003439
AP018558
Hydrogenophilia
Hydrogenophilus thermoluteolus TH-1 [AP018558]
2140821
2140748
-
Gly
CCC
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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