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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
Lentisphaerota
Bacteria
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C181147939
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
105324
105248
-
Arg
ACG
-
¡û
>C181147938
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
344438
344363
-
Arg
CCT
-
¡û
>C181147882
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
429299
429374
+
Arg
TCT
-
¡û
>C181147937
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
475972
475898
-
Met
CAT
-
¡û
>C181147936
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
547298
547224
-
Asn
GTT
-
¡û
>C181147935
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
713241
713167
-
Met
CAT
-
¡û
>C181147934
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
713326
713250
-
His
GTG
-
¡û
>C181147933
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
735843
735770
-
Gln
TTG
-
¡û
>C181147883
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
744659
744737
+
Pro
GGG
-
¡û
>C181147884
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1004765
1004854
+
Ser
CGA
-
¡û
>C181147932
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1286278
1286191
-
Ser
GGA
-
¡û
>C181147931
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1334789
1334713
-
Arg
ACG
-
¡û
>C183002735
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1407188
1407112
-
Val
GAC
-
¡û
>C183002734
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1407300
1407224
-
Val
GAC
-
¡û
>C181147930
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1660420
1660331
-
Ser
GCT
-
¡û
>C181147929
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1715847
1715772
-
Lys
CTT
-
¡û
>C181147885
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1730163
1730250
+
Ser
TGA
-
¡û
>C181147886
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
1976092
1976167
+
Thr
CGT
-
¡û
>C181147928
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2030576
2030501
-
Lys
TTT
-
¡û
>C181147927
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2117087
2117014
-
Gln
CTG
-
¡û
>C181147887
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2119414
2119491
+
Pro
CGG
-
¡û
>C181147926
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2213706
2213629
-
Pro
CGG
-
¡û
>C181147925
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2321436
2321360
-
Asp
GTC
-
¡û
>C181147924
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2321565
2321489
-
Asp
GTC
-
¡û
>C181147923
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2342164
2342088
-
Ile
GAT
-
¡û
>C181147922
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2342365
2342290
-
Ala
TGC
-
¡û
>C181147921
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2355393
2355318
-
Gly
GCC
-
¡û
>C181147920
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2355493
2355418
-
Gly
GCC
-
¡û
>C181147888
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2451531
2451607
+
Ala
CGC
-
¡û
>C181147919
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2651611
2651535
-
Ala
GGC
-
¡û
>C181147918
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2689195
2689119
-
Ile
GAT
-
¡û
>C181147917
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2689395
2689320
-
Ala
TGC
-
¡û
>C181147916
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2889287
2889211
-
Thr
TGT
-
¡û
>C181147915
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2910021
2909945
-
Met
CAT
-
¡û
>C181147914
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2910110
2910034
-
Met
CAT
-
¡û
>C181147889
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
2910280
2910355
+
Glu
TTC
-
¡û
>C181147890
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3195674
3195747
+
Cys
GCA
-
¡û
>C181147891
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3232176
3232259
+
Leu
CAA
-
¡û
>C181147892
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3235328
3235404
+
Arg
CCG
-
¡û
>C181147893
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3316112
3316196
+
Leu
GAG
-
¡û
>C181147894
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3316303
3316378
+
Thr
GGT
-
¡û
>C181147895
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3317891
3317967
+
Trp
CCA
-
¡û
>C181147896
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3339377
3339453
+
Val
TAC
-
¡û
>C181147913
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3420896
3420821
-
Phe
GAA
-
¡û
>C181147897
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3523408
3523484
+
Val
CAC
-
¡û
>C181147912
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3629237
3629154
-
Leu
TAA
-
¡û
>C181147898
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3772982
3773057
+
Glu
CTC
-
¡û
>C181147899
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3900162
3900247
+
Leu
CAG
-
¡û
>C181147900
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3900287
3900360
+
Gly
TCC
-
¡û
>C181147901
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
3900367
3900451
+
Tyr
GTA
-
¡û
>C181147902
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4041146
4041221
+
Ala
TGC
-
¡û
>C181147903
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4041262
4041338
+
Ile
GAT
-
¡û
>C181147911
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4170466
4170383
-
Leu
TAG
-
¡û
>C181147904
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4230630
4230706
+
Pro
TGG
-
¡û
>C181147910
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4319781
4319708
-
Gly
CCC
-
¡û
>C181147909
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4367990
4367915
-
Met
CAT
-
¡û
>C181147908
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4639151
4639077
-
Asn
GTT
-
¡û
>C181147905
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
4993948
4994023
+
Lys
CTT
-
¡û
>C181147906
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
5126436
5126511
+
Ala
TGC
-
¡û
>C181147907
CP027227
Lentisphaerota
Victivallales bacterium CCUG 44730 [CP027227]
5126552
5126628
+
Ile
GAT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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