Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

Metagenomic diagnosis of bacterial infections (SRP000222)

HIT: 93 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>SRA1002689	SRR001667.11548	Metagenomic diagnosis of bacterial infections (SRP000222)		20	94	+	Ile	GAT	[SRA]
	>SRA1002690	SRR001667.11622	Metagenomic diagnosis of bacterial infections (SRP000222)		79	3	-	Met	CAT	[SRA]
	>SRA1002691	SRR001667.15888	Metagenomic diagnosis of bacterial infections (SRP000222)		89	13	-	Asp	GTC	[SRA]
	>SRA1002692	SRR001667.16065	Metagenomic diagnosis of bacterial infections (SRP000222)		22	111	+	Ser	GCT	[SRA]
	>SRA1002693	SRR001667.23464	Metagenomic diagnosis of bacterial infections (SRP000222)		10	85	+	Pro	CGG	[SRA]
	>SRA1002694	SRR001667.26250	Metagenomic diagnosis of bacterial infections (SRP000222)		86	8	-	Pro	GGG	[SRA]
	>SRA1002695	SRR001667.29231	Metagenomic diagnosis of bacterial infections (SRP000222)		4	79	+	Lys	CTT	[SRA]
	>SRA1002696	SRR001667.37466	Metagenomic diagnosis of bacterial infections (SRP000222)		77	1	-	Asn	GTT	[SRA]
	>SRA1002697	SRR001667.38232	Metagenomic diagnosis of bacterial infections (SRP000222)		37	110	+	Gln	CTG	[SRA]
	>SRA1002698	SRR001667.41786	Metagenomic diagnosis of bacterial infections (SRP000222)		74	-1	-	Lys	CTT	[SRA]
	>SRA1002699	SRR001667.43311	Metagenomic diagnosis of bacterial infections (SRP000222)		100	26	-	Asp	GTC	[SRA]
	>SRA1002700	SRR001667.43572	Metagenomic diagnosis of bacterial infections (SRP000222)		10	84	+	Thr	TGT	[SRA]
	>SRA1002685	SRR001667.4549	Metagenomic diagnosis of bacterial infections (SRP000222)		22	96	+	Ile	GAT	[SRA]
	>SRA1002701	SRR001667.45920	Metagenomic diagnosis of bacterial infections (SRP000222)		73	-1	-	Asp	GTC	[SRA]
	>SRA1002702	SRR001667.46832	Metagenomic diagnosis of bacterial infections (SRP000222)		16	93	+	Ala	TGC	[SRA]
	>SRA1002686	SRR001667.6793	Metagenomic diagnosis of bacterial infections (SRP000222)		104	31	-	Phe	GAA	[SRA]
	>SRA1002687	SRR001667.7082	Metagenomic diagnosis of bacterial infections (SRP000222)		74	2	-	Glu	CTC	[SRA]
	>SRA1002688	SRR001667.7097	Metagenomic diagnosis of bacterial infections (SRP000222)		22	94	+	Thr	GGT	[SRA]
	>SRA1002708	SRR001668.10841	Metagenomic diagnosis of bacterial infections (SRP000222)		90	16	-	Ile	GAT	[SRA]
	>SRA1002709	SRR001668.12670	Metagenomic diagnosis of bacterial infections (SRP000222)		97	22	-	Val	TAC	[SRA]
	>SRA1002710	SRR001668.12692	Metagenomic diagnosis of bacterial infections (SRP000222)		89	16	-	Cys	GCA	[SRA]
	>SRA1002711	SRR001668.13363	Metagenomic diagnosis of bacterial infections (SRP000222)		95	19	-	Met	CAT	[SRA]
	>SRA1002703	SRR001668.1381	Metagenomic diagnosis of bacterial infections (SRP000222)		2	77	+	Met	CAT	[SRA]
	>SRA1002712	SRR001668.15793	Metagenomic diagnosis of bacterial infections (SRP000222)		16	92	+	Thr	TGT	[SRA]
	>SRA1002713	SRR001668.16108	Metagenomic diagnosis of bacterial infections (SRP000222)		74	2	-	Glu	CTC	[SRA]
	>SRA1002714	SRR001668.18181	Metagenomic diagnosis of bacterial infections (SRP000222)		18	92	+	Glu	TTC	[SRA]
	>SRA1002715	SRR001668.18270	Metagenomic diagnosis of bacterial infections (SRP000222)		94	20	-	Met	CAT	[SRA]
	>SRA1002716	SRR001668.21215	Metagenomic diagnosis of bacterial infections (SRP000222)		83	9	-	Pro	GGG	[SRA]
	>SRA1002717	SRR001668.21454	Metagenomic diagnosis of bacterial infections (SRP000222)		31	119	+	Ser	GGA	[SRA]
	>SRA1002718	SRR001668.25134	Metagenomic diagnosis of bacterial infections (SRP000222)		74	2	-	Glu	CTC	[SRA]
	>SRA1002719	SRR001668.25721	Metagenomic diagnosis of bacterial infections (SRP000222)		113	36	-	Arg	TCT	[SRA]
	>SRA1002720	SRR001668.29971	Metagenomic diagnosis of bacterial infections (SRP000222)		4	77	+	Phe	GAA	[SRA]
	>SRA1002721	SRR001668.36012	Metagenomic diagnosis of bacterial infections (SRP000222)		90	15	-	Phe	GAA	[SRA]
	>SRA1002722	SRR001668.38949	Metagenomic diagnosis of bacterial infections (SRP000222)		94	20	-	Met	CAT	[SRA]
	>SRA1002723	SRR001668.42562	Metagenomic diagnosis of bacterial infections (SRP000222)		18	95	+	Pro	CGG	[SRA]
	>SRA1002724	SRR001668.50268	Metagenomic diagnosis of bacterial infections (SRP000222)		84	12	-	Arg	CCT	[SRA]
	>SRA1002704	SRR001668.5637	Metagenomic diagnosis of bacterial infections (SRP000222)		71	-1	-	Glu	CTC	[SRA]
	>SRA1002705	SRR001668.7395	Metagenomic diagnosis of bacterial infections (SRP000222)		16	92	+	Thr	TGT	[SRA]
	>SRA1002706	SRR001668.8623	Metagenomic diagnosis of bacterial infections (SRP000222)		20	94	+	Ile	GAT	[SRA]
	>SRA1002707	SRR001668.9048	Metagenomic diagnosis of bacterial infections (SRP000222)		13	86	+	Phe	GAA	[SRA]
	>SRA1002729	SRR001669.10205	Metagenomic diagnosis of bacterial infections (SRP000222)		110	23	-	Ser	TGA	[SRA]
	>SRA1002726	SRR001669.1227	Metagenomic diagnosis of bacterial infections (SRP000222)		90	2	-	Ser	GGA	[SRA]
	>SRA1002730	SRR001669.12634	Metagenomic diagnosis of bacterial infections (SRP000222)		102	29	-	Ala	TGC	[SRA]
	>SRA1002731	SRR001669.12811	Metagenomic diagnosis of bacterial infections (SRP000222)		74	1	-	Gly	GCC	[SRA]
	>SRA1002732	SRR001669.14034	Metagenomic diagnosis of bacterial infections (SRP000222)		88	16	-	Cys	GCA	[SRA]
	>SRA1002733	SRR001669.17661	Metagenomic diagnosis of bacterial infections (SRP000222)		28	103	+	Pro	TGG	[SRA]
	>SRA1002734	SRR001669.18052	Metagenomic diagnosis of bacterial infections (SRP000222)		28	101	+	Phe	GAA	[SRA]
	>SRA1002735	SRR001669.21053	Metagenomic diagnosis of bacterial infections (SRP000222)		6	82	+	Asp	GTC	[SRA]
	>SRA1002736	SRR001669.21999	Metagenomic diagnosis of bacterial infections (SRP000222)		80	5	-	His	GTG	[SRA]
	>SRA1002737	SRR001669.24238	Metagenomic diagnosis of bacterial infections (SRP000222)		5	90	+	Leu	CAA	[SRA]
	>SRA1002738	SRR001669.24860	Metagenomic diagnosis of bacterial infections (SRP000222)		92	17	-	Pro	TGG	[SRA]
	>SRA1002739	SRR001669.24946	Metagenomic diagnosis of bacterial infections (SRP000222)		34	109	+	Glu	TTC	[SRA]
	>SRA1002740	SRR001669.25226	Metagenomic diagnosis of bacterial infections (SRP000222)		13	95	+	Arg	GCG	[SRA]
	>SRA1002741	SRR001669.26604	Metagenomic diagnosis of bacterial infections (SRP000222)		74	1	-	Asp	GTC	[SRA]
	>SRA1002742	SRR001669.35896	Metagenomic diagnosis of bacterial infections (SRP000222)		95	21	-	Pro	CGG	[SRA]
	>SRA1002743	SRR001669.37967	Metagenomic diagnosis of bacterial infections (SRP000222)		15	89	+	Ala	TGC	[SRA]
	>SRA1002744	SRR001669.38693	Metagenomic diagnosis of bacterial infections (SRP000222)		99	25	-	Asp	GTC	[SRA]
	>SRA1002725	SRR001669.395	Metagenomic diagnosis of bacterial infections (SRP000222)		6	82	+	Ile	GAT	[SRA]
	>SRA1002745	SRR001669.39745	Metagenomic diagnosis of bacterial infections (SRP000222)		11	85	+	Thr	TGT	[SRA]
	>SRA1002727	SRR001669.5378	Metagenomic diagnosis of bacterial infections (SRP000222)		6	82	+	Asp	GTC	[SRA]
	>SRA1002728	SRR001669.7344	Metagenomic diagnosis of bacterial infections (SRP000222)		96	22	-	Cys	GCA	[SRA]
	>SRA1002750	SRR001670.12170	Metagenomic diagnosis of bacterial infections (SRP000222)		99	28	-	Cys	GCA	[SRA]
	>SRA1002751	SRR001670.16455	Metagenomic diagnosis of bacterial infections (SRP000222)		103	27	-	Ala	TGC	[SRA]
	>SRA1002752	SRR001670.18411	Metagenomic diagnosis of bacterial infections (SRP000222)		5	79	+	Met	CAT	[SRA]
	>SRA1002753	SRR001670.18492	Metagenomic diagnosis of bacterial infections (SRP000222)		102	15	-	Ser	TGA	[SRA]
	>SRA1002754	SRR001670.20543	Metagenomic diagnosis of bacterial infections (SRP000222)		74	-1	-	Trp	CCA	[SRA]
	>SRA1002755	SRR001670.21261	Metagenomic diagnosis of bacterial infections (SRP000222)		12	85	+	Ala	TGC	[SRA]
	>SRA1002756	SRR001670.22819	Metagenomic diagnosis of bacterial infections (SRP000222)		103	30	-	Gly	GCC	[SRA]
	>SRA1002757	SRR001670.26049	Metagenomic diagnosis of bacterial infections (SRP000222)		21	97	+	Thr	TGT	[SRA]
	>SRA1002758	SRR001670.27392	Metagenomic diagnosis of bacterial infections (SRP000222)		98	26	-	Glu	CTC	[SRA]
	>SRA1002759	SRR001670.29422	Metagenomic diagnosis of bacterial infections (SRP000222)		16	91	+	Gly	GCC	[SRA]
	>SRA1002760	SRR001670.30252	Metagenomic diagnosis of bacterial infections (SRP000222)		3	79	+	Val	TAC	[SRA]
	>SRA1002746	SRR001670.3047	Metagenomic diagnosis of bacterial infections (SRP000222)		82	8	-	Thr	GGT	[SRA]
	>SRA1002761	SRR001670.31371	Metagenomic diagnosis of bacterial infections (SRP000222)		96	22	-	Cys	GCA	[SRA]
	>SRA1002762	SRR001670.32248	Metagenomic diagnosis of bacterial infections (SRP000222)		103	19	-	Leu	GAG	[SRA]
	>SRA1002763	SRR001670.35976	Metagenomic diagnosis of bacterial infections (SRP000222)		103	19	-	Leu	GAG	[SRA]
	>SRA1002747	SRR001670.3612	Metagenomic diagnosis of bacterial infections (SRP000222)		102	29	-	Ala	TGC	[SRA]
	>SRA1002764	SRR001670.37519	Metagenomic diagnosis of bacterial infections (SRP000222)		106	29	-	Pro	TGG	[SRA]
	>SRA1002765	SRR001670.37711	Metagenomic diagnosis of bacterial infections (SRP000222)		12	85	+	Gln	TTG	[SRA]
	>SRA1002766	SRR001670.38037	Metagenomic diagnosis of bacterial infections (SRP000222)		103	19	-	Leu	GAG	[SRA]
	>SRA1002767	SRR001670.38683	Metagenomic diagnosis of bacterial infections (SRP000222)		96	22	-	Cys	GCA	[SRA]
	>SRA1002768	SRR001670.40603	Metagenomic diagnosis of bacterial infections (SRP000222)		75	1	-	Ala	TGC	[SRA]
	>SRA1002769	SRR001670.42159	Metagenomic diagnosis of bacterial infections (SRP000222)		28	103	+	Pro	TGG	[SRA]
	>SRA1002770	SRR001670.44512	Metagenomic diagnosis of bacterial infections (SRP000222)		16	91	+	Gly	GCC	[SRA]
	>SRA1002771	SRR001670.45121	Metagenomic diagnosis of bacterial infections (SRP000222)		102	29	-	Ala	TGC	[SRA]
	>SRA1002772	SRR001670.45417	Metagenomic diagnosis of bacterial infections (SRP000222)		6	82	+	Ile	GAT	[SRA]
	>SRA1002773	SRR001670.46595	Metagenomic diagnosis of bacterial infections (SRP000222)		7	82	+	His	GTG	[SRA]
	>SRA1002774	SRR001670.51437	Metagenomic diagnosis of bacterial infections (SRP000222)		81	7	-	Pro	TGG	[SRA]
	>SRA1002775	SRR001670.52481	Metagenomic diagnosis of bacterial infections (SRP000222)		89	12	-	Asn	GTT	[SRA]
	>SRA1002776	SRR001670.53105	Metagenomic diagnosis of bacterial infections (SRP000222)		103	19	-	Leu	GAG	[SRA]
	>SRA1002777	SRR001670.54570	Metagenomic diagnosis of bacterial infections (SRP000222)		93	7	-	Leu	TAG	[SRA]
	>SRA1002748	SRR001670.7547	Metagenomic diagnosis of bacterial infections (SRP000222)		81	7	-	Pro	TGG	[SRA]
	>SRA1002749	SRR001670.8496	Metagenomic diagnosis of bacterial infections (SRP000222)		103	19	-	Leu	GAG	[SRA]
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK