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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Methanobacteriota
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PL201001223
CP054708
Methanobacteriota
Halarchaeum sp. CBA1220 plasmid:pCBA1220-01 [CP054708]
528010
527937
-
Ala
TGC
[ENA]
¡û
>PL201001224
CP054709
Methanobacteriota
Halarchaeum sp. CBA1220 plasmid:pCBA1220-02 [CP054709]
190155
190231
+
fMet
CAT
[ENA]
¡û
>PL201001225
CP054710
Methanobacteriota
Halarchaeum sp. CBA1220 plasmid:pCBA1220-03 [CP054710]
97831
97907
+
fMet
CAT
[ENA]
¡û
>PL201001294
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
46331
46417
+
Leu
CAG
[ENA]
¡û
>PL201001295
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
46875
46960
+
Ser
TGA
[ENA]
¡û
>PL201001296
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
47106
47197
+
Leu
TAA
[ENA]
¡û
>PL201001297
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53010
53084
+
Asn
GTT
[ENA]
¡û
>PL201001298
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53165
53239
+
Trp
CCA
[ENA]
¡û
>PL201001299
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53326
53398
+
Val
GAC
[ENA]
¡û
>PL201001300
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53485
53559
+
Val
TAC
[ENA]
¡û
>PL203000156
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53677
53751
+
Ala
TGC
[ENA]
¡û
>PL201001301
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
53840
53915
+
Lys
CTT
[ENA]
¡û
>PL206000210
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
54066
54143
+
Lys
TTT
[ENA]
¡û
>PL201001302
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
54272
54345
+
Thr
CGT
[ENA]
¡û
>PL201001303
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
54937
55009
+
Asp
GTC
[ENA]
¡û
>PL201001304
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
55162
55240
+
Met
CAT
[ENA]
¡û
>PL201001305
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
55319
55397
+
Glu
TTC
[ENA]
¡û
>PL201001306
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
55471
55545
+
Gly
GCC
[ENA]
¡û
>PL201001307
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
56002
56073
+
Gly
TCC
[ENA]
¡û
>PL201001308
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
56200
56273
+
Gln
TTG
[ENA]
¡û
>PL201001309
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
56884
56960
+
Glu
CTC
[ENA]
¡û
>PL201001310
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
57141
57216
+
Gln
CTG
[ENA]
¡û
>PL201001311
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
57314
57387
+
His
GTG
[ENA]
¡û
>PL201001312
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
57518
57591
+
Ala
GGC
[ENA]
¡û
>PL201001313
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
57695
57772
+
Pro
TGG
[ENA]
¡û
>PL201001314
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
58599
58671
+
Arg
TCT
[ENA]
¡û
>PL203000157
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
58674
58751
+
Arg
TCG
[ENA]
¡û
>PL201001315
CP058532
Methanobacteriota
Halobonum sp. Gai3-2 plasmid:unnamed3 [CP058532]
58959
59031
+
Ile
GAT
[ENA]
¡û
>PL201000678
CP045490
Methanobacteriota
Natronorubrum aibiense 7-3 plasmid:unnamed2 [CP045490]
30592
30517
-
fMet
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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