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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
Olavius algarvensis microbiome from Mediterranean sea
HIT:
156 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV079061
AASZ01000030
Olavius algarvensis microbiome from Mediterranean sea
18224
18148
-
Arg
CCG
[ENA]
>WENV079062
AASZ01000033
Olavius algarvensis microbiome from Mediterranean sea
68973
69048
+
Lys
TTT
[ENA]
>WENV079063
AASZ01000037
Olavius algarvensis microbiome from Mediterranean sea
934
1020
+
Tyr
GTA
[ENA]
>WENV079064
AASZ01000037
Olavius algarvensis microbiome from Mediterranean sea
1226
1300
+
Gly
TCC
[ENA]
>WENV079065
AASZ01000037
Olavius algarvensis microbiome from Mediterranean sea
1327
1402
+
Thr
GGT
[ENA]
>WENV079066
AASZ01000037
Olavius algarvensis microbiome from Mediterranean sea
3036
3113
+
Trp
CCA
[ENA]
>WENV079067
AASZ01000046
Olavius algarvensis microbiome from Mediterranean sea
14457
14535
+
Pro
TGG
[ENA]
>WENV079068
AASZ01000046
Olavius algarvensis microbiome from Mediterranean sea
15131
15208
+
His
GTG
[ENA]
>WENV079069
AASZ01000046
Olavius algarvensis microbiome from Mediterranean sea
15306
15391
+
Leu
TAG
[ENA]
>WENV079070
AASZ01000046
Olavius algarvensis microbiome from Mediterranean sea
22113
22190
+
Val
TAC
[ENA]
>WENV079071
AASZ01000046
Olavius algarvensis microbiome from Mediterranean sea
22198
22274
+
Asp
GTC
[ENA]
>WENV079072
AASZ01000051
Olavius algarvensis microbiome from Mediterranean sea
2661
2747
+
Leu
GAG
[ENA]
>WENV079073
AASZ01000051
Olavius algarvensis microbiome from Mediterranean sea
17399
17475
+
Met
CAT
[ENA]
>WENV079074
AASZ01000054
Olavius algarvensis microbiome from Mediterranean sea
21632
21554
-
Arg
CCT
[ENA]
>WENV079075
AASZ01000058
Olavius algarvensis microbiome from Mediterranean sea
1762
1674
-
Leu
CAG
[ENA]
>WENV079076
AASZ01000058
Olavius algarvensis microbiome from Mediterranean sea
13427
13505
+
Arg
ACG
[ENA]
>WENV079077
AASZ01000071
Olavius algarvensis microbiome from Mediterranean sea
1081
1156
+
Gly
GCC
[ENA]
>WENV079078
AASZ01000071
Olavius algarvensis microbiome from Mediterranean sea
1251
1324
+
Cys
GCA
[ENA]
>WENV079079
AASZ01000103
Olavius algarvensis microbiome from Mediterranean sea
11720
11795
+
Ala
GGC
[ENA]
>WENV079080
AASZ01000103
Olavius algarvensis microbiome from Mediterranean sea
11817
11895
+
Glu
TTC
[ENA]
>WENV079081
AASZ01000105
Olavius algarvensis microbiome from Mediterranean sea
2829
2753
-
Pro
GGG
[ENA]
>WENV079082
AASZ01000105
Olavius algarvensis microbiome from Mediterranean sea
10230
10152
-
Val
GAC
[ENA]
>WENV079083
AASZ01000134
Olavius algarvensis microbiome from Mediterranean sea
11886
11808
-
Met
CAT
[ENA]
>WENV079084
AASZ01000134
Olavius algarvensis microbiome from Mediterranean sea
17675
17599
-
Gln
TTG
[ENA]
>WENV079085
AASZ01000155
Olavius algarvensis microbiome from Mediterranean sea
7566
7489
-
Phe
GAA
[ENA]
>WENV079086
AASZ01000202
Olavius algarvensis microbiome from Mediterranean sea
19197
19120
-
Thr
TGT
[ENA]
>WENV079087
AASZ01000208
Olavius algarvensis microbiome from Mediterranean sea
6139
6064
-
Ala
TGC
[ENA]
>WENV079088
AASZ01000208
Olavius algarvensis microbiome from Mediterranean sea
6504
6428
-
Ile
GAT
[ENA]
>WENV079089
AASZ01000213
Olavius algarvensis microbiome from Mediterranean sea
10446
10354
-
Ser
GCT
[ENA]
>WENV079090
AASZ01000214
Olavius algarvensis microbiome from Mediterranean sea
33996
33921
-
Gly
CCC
[ENA]
>WENV079091
AASZ01000245
Olavius algarvensis microbiome from Mediterranean sea
1563
1639
+
Lys
CTT
[ENA]
>WENV079092
AASZ01000272
Olavius algarvensis microbiome from Mediterranean sea
4920
4844
-
Glu
CTC
[ENA]
>WENV079093
AASZ01000286
Olavius algarvensis microbiome from Mediterranean sea
27756
27679
-
Gly
CCC
[ENA]
>WENV079094
AASZ01000314
Olavius algarvensis microbiome from Mediterranean sea
10277
10355
+
Pro
GGG
[ENA]
>WENV079095
AASZ01000323
Olavius algarvensis microbiome from Mediterranean sea
12911
12999
+
Leu
CAG
[ENA]
>WENV079096
AASZ01000408
Olavius algarvensis microbiome from Mediterranean sea
495
418
-
Glu
TTC
[ENA]
>WENV079097
AASZ01000408
Olavius algarvensis microbiome from Mediterranean sea
625
550
-
Ala
GGC
[ENA]
>WENV079098
AASZ01000457
Olavius algarvensis microbiome from Mediterranean sea
1701
1776
+
Glu
CTC
[ENA]
>WENV079099
AASZ01000516
Olavius algarvensis microbiome from Mediterranean sea
1551
1629
+
Pro
TGG
[ENA]
>WENV079100
AASZ01000534
Olavius algarvensis microbiome from Mediterranean sea
7687
7612
-
Ala
TGC
[ENA]
>WENV079101
AASZ01000534
Olavius algarvensis microbiome from Mediterranean sea
7826
7749
-
Ile
GAT
[ENA]
>WENV079102
AASZ01000538
Olavius algarvensis microbiome from Mediterranean sea
7583
7507
-
Gln
TTG
[ENA]
>WENV079103
AASZ01000663
Olavius algarvensis microbiome from Mediterranean sea
1243
1327
+
Leu
TAG
[ENA]
>WENV079104
AASZ01000690
Olavius algarvensis microbiome from Mediterranean sea
335
257
-
Met
CAT
[ENA]
>WENV079105
AASZ01000694
Olavius algarvensis microbiome from Mediterranean sea
9234
9310
+
Gly
GCC
[ENA]
>WENV079106
AASZ01000694
Olavius algarvensis microbiome from Mediterranean sea
9319
9395
+
Cys
GCA
[ENA]
>WENV079107
AASZ01000709
Olavius algarvensis microbiome from Mediterranean sea
10067
9989
-
Pro
CGG
[ENA]
>WENV079108
AASZ01000709
Olavius algarvensis microbiome from Mediterranean sea
12131
12210
+
Arg
ACG
[ENA]
>WENV079109
AASZ01000761
Olavius algarvensis microbiome from Mediterranean sea
13117
13041
-
Met
CAT
[ENA]
>WENV079110
AASZ01000786
Olavius algarvensis microbiome from Mediterranean sea
6675
6763
+
Leu
CAA
[ENA]
>WENV079111
AASZ01000859
Olavius algarvensis microbiome from Mediterranean sea
5449
5374
-
Asn
GTT
[ENA]
>WENV079112
AASZ01000892
Olavius algarvensis microbiome from Mediterranean sea
3865
3940
+
Val
TAC
[ENA]
>WENV079113
AASZ01000892
Olavius algarvensis microbiome from Mediterranean sea
3955
4034
+
Asp
GTC
[ENA]
>WENV079114
AASZ01000913
Olavius algarvensis microbiome from Mediterranean sea
8631
8706
+
Phe
GAA
[ENA]
>WENV079115
AASZ01000917
Olavius algarvensis microbiome from Mediterranean sea
3786
3709
-
Ala
GGC
[ENA]
>WENV079116
AASZ01000925
Olavius algarvensis microbiome from Mediterranean sea
4204
4127
-
Ala
TGC
[ENA]
>WENV079117
AASZ01000925
Olavius algarvensis microbiome from Mediterranean sea
4287
4210
-
Ile
GAT
[ENA]
>WENV079118
AASZ01000930
Olavius algarvensis microbiome from Mediterranean sea
243
321
+
Pro
GGG
[ENA]
>WENV079119
AASZ01000998
Olavius algarvensis microbiome from Mediterranean sea
7403
7325
-
Arg
TCG
[ENA]
>WENV079120
AASZ01000998
Olavius algarvensis microbiome from Mediterranean sea
7689
7612
-
His
GTG
[ENA]
>WENV079121
AASZ01001009
Olavius algarvensis microbiome from Mediterranean sea
1780
1868
+
Leu
TAG
[ENA]
>WENV079122
AASZ01001009
Olavius algarvensis microbiome from Mediterranean sea
9208
9133
-
Val
TAC
[ENA]
>WENV079123
AASZ01001134
Olavius algarvensis microbiome from Mediterranean sea
6803
6716
-
Leu
CAA
[ENA]
>WENV079124
AASZ01001136
Olavius algarvensis microbiome from Mediterranean sea
3856
3778
-
Met
CAT
[ENA]
>WENV079125
AASZ01001144
Olavius algarvensis microbiome from Mediterranean sea
86
160
+
Cys
GCA
[ENA]
>WENV079126
AASZ01001256
Olavius algarvensis microbiome from Mediterranean sea
2212
2288
+
Val
CAC
[ENA]
>WENV079127
AASZ01001301
Olavius algarvensis microbiome from Mediterranean sea
1406
1481
+
Gly
GCC
[ENA]
>WENV079128
AASZ01001311
Olavius algarvensis microbiome from Mediterranean sea
1579
1504
-
Thr
CGT
[ENA]
>WENV079129
AASZ01001378
Olavius algarvensis microbiome from Mediterranean sea
1291
1213
-
Trp
CCA
[ENA]
>WENV079130
AASZ01001380
Olavius algarvensis microbiome from Mediterranean sea
141
55
-
Tyr
GTA
[ENA]
>WENV079131
AASZ01001380
Olavius algarvensis microbiome from Mediterranean sea
230
153
-
Thr
TGT
[ENA]
>WENV079132
AASZ01001380
Olavius algarvensis microbiome from Mediterranean sea
3022
3099
+
Arg
CCT
[ENA]
>WENV079133
AASZ01001496
Olavius algarvensis microbiome from Mediterranean sea
2558
2655
+
Sec
TCA
[ENA]
>WENV079134
AASZ01001499
Olavius algarvensis microbiome from Mediterranean sea
211
122
-
Leu
TAA
[ENA]
>WENV079135
AASZ01001564
Olavius algarvensis microbiome from Mediterranean sea
12523
12612
+
Leu
TAA
[ENA]
>WENV079136
AASZ01001575
Olavius algarvensis microbiome from Mediterranean sea
628
553
-
Lys
CTT
[ENA]
>WENV079137
AASZ01001575
Olavius algarvensis microbiome from Mediterranean sea
794
717
-
His
GTG
[ENA]
>WENV079138
AASZ01001575
Olavius algarvensis microbiome from Mediterranean sea
1006
930
-
Arg
TCT
[ENA]
>WENV079139
AASZ01001575
Olavius algarvensis microbiome from Mediterranean sea
1145
1069
-
Pro
TGG
[ENA]
>WENV079140
AASZ01001626
Olavius algarvensis microbiome from Mediterranean sea
6110
6198
+
Leu
GAG
[ENA]
>WENV079141
AASZ01001644
Olavius algarvensis microbiome from Mediterranean sea
35258
35181
-
Trp
CCA
[ENA]
>WENV079142
AASZ01001662
Olavius algarvensis microbiome from Mediterranean sea
6194
6120
-
Val
GAC
[ENA]
>WENV079143
AASZ01001664
Olavius algarvensis microbiome from Mediterranean sea
2768
2857
+
Ser
TGA
[ENA]
>WENV079144
AASZ01001665
Olavius algarvensis microbiome from Mediterranean sea
621
715
+
Ser
GCT
[ENA]
>WENV079145
AASZ01001704
Olavius algarvensis microbiome from Mediterranean sea
3642
3717
+
Arg
CCT
[ENA]
>WENV079146
AASZ01001717
Olavius algarvensis microbiome from Mediterranean sea
4844
4767
-
Asn
GTT
[ENA]
>WENV079147
AASZ01001800
Olavius algarvensis microbiome from Mediterranean sea
243
168
-
Thr
CGT
[ENA]
>WENV079148
AASZ01001860
Olavius algarvensis microbiome from Mediterranean sea
921
999
+
Met
CAT
[ENA]
>WENV079149
AASZ01001876
Olavius algarvensis microbiome from Mediterranean sea
283
208
-
Thr
TGT
[ENA]
>WENV079150
AASZ01002059
Olavius algarvensis microbiome from Mediterranean sea
1787
1711
-
Met
CAT
[ENA]
>WENV079151
AASZ01002060
Olavius algarvensis microbiome from Mediterranean sea
43
121
+
Arg
TCG
[ENA]
>WENV079152
AASZ01002144
Olavius algarvensis microbiome from Mediterranean sea
3176
3097
-
Glu
TTC
[ENA]
>WENV079153
AASZ01002144
Olavius algarvensis microbiome from Mediterranean sea
3271
3194
-
Lys
TTT
[ENA]
>WENV079154
AASZ01002146
Olavius algarvensis microbiome from Mediterranean sea
6648
6726
+
Arg
TCT
[ENA]
>WENV079155
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
782
870
+
Leu
GAG
[ENA]
>WENV079156
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
22209
22131
-
Leu
AAG
[ENA]
>WENV079157
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
22571
22494
-
Asn
GTT
[ENA]
>WENV079158
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
23708
23631
-
Lys
TTT
[ENA]
>WENV079159
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
23793
23715
-
Arg
ACG
[ENA]
>WENV079160
AASZ01002160
Olavius algarvensis microbiome from Mediterranean sea
23870
23795
-
Met
CAT
[ENA]
>WENV079161
AASZ01002184
Olavius algarvensis microbiome from Mediterranean sea
3260
3334
+
Val
CAC
[ENA]
>WENV079162
AASZ01002210
Olavius algarvensis microbiome from Mediterranean sea
1701
1792
+
Ser
CGA
[ENA]
>WENV079163
AASZ01002210
Olavius algarvensis microbiome from Mediterranean sea
1906
2001
+
Ser
GGA
[ENA]
>WENV079164
AASZ01002239
Olavius algarvensis microbiome from Mediterranean sea
3735
3639
-
Sec
TCA
[ENA]
>WENV079165
AASZ01002270
Olavius algarvensis microbiome from Mediterranean sea
5856
5781
-
Ala
TGC
[ENA]
>WENV079166
AASZ01002270
Olavius algarvensis microbiome from Mediterranean sea
5959
5881
-
Ile
GAT
[ENA]
>WENV079167
AASZ01002376
Olavius algarvensis microbiome from Mediterranean sea
1293
1218
-
Met
CAT
[ENA]
>WENV079168
AASZ01002376
Olavius algarvensis microbiome from Mediterranean sea
7941
7864
-
Ala
CGC
[ENA]
>WENV079169
AASZ01002380
Olavius algarvensis microbiome from Mediterranean sea
1592
1518
-
Val
GAC
[ENA]
>WENV079170
AASZ01002533
Olavius algarvensis microbiome from Mediterranean sea
3153
3059
-
Ser
GCT
[ENA]
>WENV079171
AASZ01002533
Olavius algarvensis microbiome from Mediterranean sea
3354
3269
-
Ser
TGA
[ENA]
>WENV079172
AASZ01002547
Olavius algarvensis microbiome from Mediterranean sea
832
754
-
Lys
CTT
[ENA]
>WENV079173
AASZ01002562
Olavius algarvensis microbiome from Mediterranean sea
7621
7696
+
Gln
CTG
[ENA]
>WENV079174
AASZ01002572
Olavius algarvensis microbiome from Mediterranean sea
999
925
-
Val
CAC
[ENA]
>WENV079175
AASZ01002721
Olavius algarvensis microbiome from Mediterranean sea
4161
4075
-
Leu
CAA
[ENA]
>WENV079176
AASZ01002754
Olavius algarvensis microbiome from Mediterranean sea
3102
3190
+
Leu
GAG
[ENA]
>WENV079177
AASZ01002816
Olavius algarvensis microbiome from Mediterranean sea
2021
2098
+
Arg
CCG
[ENA]
>WENV079178
AASZ01002820
Olavius algarvensis microbiome from Mediterranean sea
2051
1976
-
Pro
TGG
[ENA]
>WENV079179
AASZ01002820
Olavius algarvensis microbiome from Mediterranean sea
3325
3413
+
Leu
TAG
[ENA]
>WENV079180
AASZ01002843
Olavius algarvensis microbiome from Mediterranean sea
3007
3082
+
Lys
TTT
[ENA]
>WENV079181
AASZ01002843
Olavius algarvensis microbiome from Mediterranean sea
3165
3244
+
Glu
TTC
[ENA]
>WENV079182
AASZ01002934
Olavius algarvensis microbiome from Mediterranean sea
98
20
-
Arg
ACG
[ENA]
>WENV079183
AASZ01002935
Olavius algarvensis microbiome from Mediterranean sea
474
552
+
Pro
CGG
[ENA]
>WENV079184
AASZ01002950
Olavius algarvensis microbiome from Mediterranean sea
2766
2689
-
Trp
CCA
[ENA]
>WENV079185
AASZ01002970
Olavius algarvensis microbiome from Mediterranean sea
1554
1629
+
Gln
CTG
[ENA]
>WENV079186
AASZ01003107
Olavius algarvensis microbiome from Mediterranean sea
552
475
-
Trp
CCA
[ENA]
>WENV079187
AASZ01003109
Olavius algarvensis microbiome from Mediterranean sea
689
611
-
Thr
GGT
[ENA]
>WENV079188
AASZ01003109
Olavius algarvensis microbiome from Mediterranean sea
826
749
-
Gly
TCC
[ENA]
>WENV079189
AASZ01003109
Olavius algarvensis microbiome from Mediterranean sea
1070
986
-
Tyr
GTA
[ENA]
>WENV079190
AASZ01003109
Olavius algarvensis microbiome from Mediterranean sea
1311
1234
-
Thr
TGT
[ENA]
>WENV079191
AASZ01003371
Olavius algarvensis microbiome from Mediterranean sea
314
390
+
Met
CAT
[ENA]
>WENV079192
AASZ01003439
Olavius algarvensis microbiome from Mediterranean sea
1399
1483
+
Tyr
GTA
[ENA]
>WENV079193
AASZ01003439
Olavius algarvensis microbiome from Mediterranean sea
1524
1599
+
Gly
TCC
[ENA]
>WENV079194
AASZ01003439
Olavius algarvensis microbiome from Mediterranean sea
1628
1703
+
Thr
GGT
[ENA]
>WENV079195
AASZ01003536
Olavius algarvensis microbiome from Mediterranean sea
218
292
+
Gln
TTG
[ENA]
>WENV079196
AASZ01003570
Olavius algarvensis microbiome from Mediterranean sea
1320
1246
-
Cys
GCA
[ENA]
>WENV079197
AASZ01003570
Olavius algarvensis microbiome from Mediterranean sea
1448
1372
-
Gly
GCC
[ENA]
>WENV079198
AASZ01003752
Olavius algarvensis microbiome from Mediterranean sea
1482
1409
-
Gly
CCC
[ENA]
>WENV079199
AASZ01003991
Olavius algarvensis microbiome from Mediterranean sea
246
171
-
Met
CAT
[ENA]
>WENV079200
AASZ01004004
Olavius algarvensis microbiome from Mediterranean sea
766
674
-
Ser
GCT
[ENA]
>WENV079201
AASZ01004093
Olavius algarvensis microbiome from Mediterranean sea
836
758
-
Met
CAT
[ENA]
>WENV079202
AASZ01004387
Olavius algarvensis microbiome from Mediterranean sea
284
206
-
Asp
GTC
[ENA]
>WENV079203
AASZ01004387
Olavius algarvensis microbiome from Mediterranean sea
368
293
-
Val
TAC
[ENA]
>WENV079204
AASZ01004535
Olavius algarvensis microbiome from Mediterranean sea
204
282
+
Pro
CGG
[ENA]
>WENV079205
AASZ01004580
Olavius algarvensis microbiome from Mediterranean sea
947
870
-
Lys
TTT
[ENA]
>WENV079206
AASZ01004653
Olavius algarvensis microbiome from Mediterranean sea
970
895
-
Val
TAC
[ENA]
>WENV079207
AASZ01005111
Olavius algarvensis microbiome from Mediterranean sea
123
198
+
Gly
GCC
[ENA]
>WENV079208
AASZ01005111
Olavius algarvensis microbiome from Mediterranean sea
293
366
+
Cys
GCA
[ENA]
>WENV079209
AASZ01005111
Olavius algarvensis microbiome from Mediterranean sea
554
640
+
Leu
TAA
[ENA]
>WENV079210
AASZ01005226
Olavius algarvensis microbiome from Mediterranean sea
1042
1120
+
Cys
GCA
[ENA]
>WENV079211
AASZ01005240
Olavius algarvensis microbiome from Mediterranean sea
807
719
-
Leu
CAG
[ENA]
>WENV079212
AASZ01005260
Olavius algarvensis microbiome from Mediterranean sea
84
160
+
Val
GAC
[ENA]
>WENV079213
AASZ01005262
Olavius algarvensis microbiome from Mediterranean sea
251
327
+
Met
CAT
[ENA]
>WENV079214
AASZ01005287
Olavius algarvensis microbiome from Mediterranean sea
833
925
+
Ser
GGA
[ENA]
>WENV079215
AASZ01005423
Olavius algarvensis microbiome from Mediterranean sea
531
436
-
Ser
GGA
[ENA]
>WENV079216
AASZ01005423
Olavius algarvensis microbiome from Mediterranean sea
734
646
-
Ser
CGA
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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