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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Oral TM7c microbial communities of Human
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV080325
ABBX01000006
Oral TM7c microbial communities of Human
1538
1461
-
Phe
GAA
[ENA]
>WENV080326
ABBX01000006
Oral TM7c microbial communities of Human
1639
1712
+
Cys
GCA
[ENA]
>WENV080327
ABBX01000006
Oral TM7c microbial communities of Human
2355
2444
+
Leu
TAA
[ENA]
>WENV080328
ABBX01000006
Oral TM7c microbial communities of Human
6219
6295
+
Val
TAC
[ENA]
>WENV080329
ABBX01000006
Oral TM7c microbial communities of Human
6486
6397
-
Leu
GAG
[ENA]
>WENV080330
ABBX01000010
Oral TM7c microbial communities of Human
701
779
+
Met
CAT
[ENA]
>WENV080331
ABBX01000012
Oral TM7c microbial communities of Human
115
39
-
Gly
CCC
[ENA]
>WENV080332
ABBX01000014
Oral TM7c microbial communities of Human
237
312
+
Thr
CGT
[ENA]
>WENV080333
ABBX01000014
Oral TM7c microbial communities of Human
3223
3145
-
Val
GAC
[ENA]
>WENV080334
ABBX01000021
Oral TM7c microbial communities of Human
1940
2031
+
Ser
GGA
[ENA]
>WENV080335
ABBX01000022
Oral TM7c microbial communities of Human
32314
32405
+
Ser
TGA
[ENA]
>WENV080336
ABBX01000022
Oral TM7c microbial communities of Human
33354
33448
+
Ser
GCT
[ENA]
>WENV080337
ABBX01000024
Oral TM7c microbial communities of Human
158
233
+
Thr
GGT
[ENA]
>WENV080338
ABBX01000031
Oral TM7c microbial communities of Human
4126
4214
+
Leu
CAA
[ENA]
>WENV080339
ABBX01000046
Oral TM7c microbial communities of Human
13154
13230
+
Trp
CCA
[ENA]
>WENV080340
ABBX01000056
Oral TM7c microbial communities of Human
2960
2876
-
Tyr
GTA
[ENA]
>WENV080341
ABBX01000056
Oral TM7c microbial communities of Human
3045
2969
-
Thr
TGT
[ENA]
>WENV080342
ABBX01000056
Oral TM7c microbial communities of Human
3538
3614
+
Thr
GGT
[ENA]
>WENV080343
ABBX01000060
Oral TM7c microbial communities of Human
222
298
+
Glu
CTC
[ENA]
>WENV080344
ABBX01000078
Oral TM7c microbial communities of Human
741
817
+
Asn
GTT
[ENA]
>WENV080345
ABBX01000083
Oral TM7c microbial communities of Human
2429
2351
-
Val
TAC
[ENA]
>WENV080346
ABBX01000096
Oral TM7c microbial communities of Human
341
265
-
Asn
GTT
[ENA]
>WENV080347
ABBX01000101
Oral TM7c microbial communities of Human
78
2
-
Ile
GAT
[ENA]
>WENV080348
ABBX01000101
Oral TM7c microbial communities of Human
207
129
-
Ala
TGC
[ENA]
>WENV080349
ABBX01000106
Oral TM7c microbial communities of Human
965
1043
+
Arg
GCG
[ENA]
>WENV080350
ABBX01000106
Oral TM7c microbial communities of Human
1105
1195
+
Ser
CGA
[ENA]
>WENV080351
ABBX01000127
Oral TM7c microbial communities of Human
9675
9598
-
Pro
TGG
[ENA]
>WENV080352
ABBX01000127
Oral TM7c microbial communities of Human
22280
22205
-
Arg
TCT
[ENA]
>WENV080353
ABBX01000127
Oral TM7c microbial communities of Human
22400
22322
-
His
GTG
[ENA]
>WENV080354
ABBX01000127
Oral TM7c microbial communities of Human
24741
24667
-
Gly
TCC
[ENA]
>WENV080355
ABBX01000127
Oral TM7c microbial communities of Human
30334
30256
-
Lys
CTT
[ENA]
>WENV080356
ABBX01000127
Oral TM7c microbial communities of Human
34527
34451
-
Arg
TCG
[ENA]
>WENV080357
ABBX01000127
Oral TM7c microbial communities of Human
35890
35814
-
Glu
TTC
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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