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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Thermodesulfobiota
Bacteria
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C181047560
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
101142
101067
-
Glu
CTC
-
¡û
>C181047559
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
101226
101153
-
Gln
CTG
-
¡û
>C181047558
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
101308
101233
-
Phe
GAA
-
¡û
>C181047515
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
205928
206002
+
Pro
TGG
-
¡û
>C181047516
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
220787
220861
+
Gln
TTG
-
¡û
>C181047517
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
221880
221973
+
SeC
TCA
-
¡û
>C181047518
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
261625
261717
+
Ser
GGA
-
¡û
>C181047557
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
286258
286182
-
Lys
TTT
-
¡û
>C181047519
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
309927
310002
+
Ala
TGC
-
¡û
>C181047556
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
326638
326547
-
Ser
CGA
-
¡û
>C181047520
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
359174
359250
+
Met
CAT
-
¡û
>C181047555
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
436980
436904
-
Arg
ACG
-
¡û
>C181047521
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
493898
493972
+
Trp
CCA
-
¡û
>C181047522
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
584970
585044
+
Met
CAT
-
¡û
>C181047523
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
640151
640226
+
Gly
TCC
-
¡û
>C181047524
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
640238
640314
+
Arg
TCT
-
¡û
>C181047525
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
642572
642647
+
Glu
TTC
-
¡û
>C181047526
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
642675
642749
+
Val
TAC
-
¡û
>C181047527
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
664382
664456
+
Met
CAT
-
¡û
>C181047528
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
694474
694564
+
Ser
TGA
-
¡û
>C181047529
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
694789
694875
+
Leu
GAG
-
¡û
>C181047530
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
712450
712525
+
Ala
GGC
-
¡û
>C181047531
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
753176
753252
+
Ile
GAT
-
¡û
>C181047532
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
753273
753348
+
Ala
CGC
-
¡û
>C181047533
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
768482
768558
+
Arg
CCT
-
¡û
>C181047554
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
883493
883419
-
Gly
GCC
-
¡û
>C181047553
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
883589
883506
-
Leu
TAG
-
¡û
>C181047534
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
891833
891908
+
Thr
TGT
-
¡û
>C181047552
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
908321
908246
-
Thr
CGT
-
¡û
>C181047551
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1030451
1030376
-
Thr
GGT
-
¡û
>C181047550
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1030539
1030455
-
Tyr
GTA
-
¡û
>C181047549
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1032009
1031935
-
Asn
GTT
-
¡û
>C181047548
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1032096
1032021
-
Lys
CTT
-
¡û
>C181047535
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1065374
1065460
+
Leu
CAG
-
¡û
>C181047536
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1065817
1065903
+
Leu
CAA
-
¡û
>C181047547
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1071454
1071379
-
Val
GAC
-
¡û
>C181047546
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1102189
1102115
-
Pro
CGG
-
¡û
>C181047545
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1182324
1182250
-
Pro
GGG
-
¡û
>C181047544
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1258514
1258440
-
Val
CAC
-
¡û
>C181047543
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1322482
1322391
-
Ser
GCT
-
¡û
>C181047537
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1473212
1473288
+
Asp
GTC
-
¡û
>C181047538
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1527187
1527261
+
Gly
CCC
-
¡û
>C181047539
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1527270
1527344
+
Cys
GCA
-
¡û
>C181047540
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1527354
1527438
+
Leu
TAA
-
¡û
>C181047542
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1772040
1771964
-
Arg
TCG
-
¡û
>C181047541
CP020921
Thermodesulfobiota
Thermodesulfobium acidiphilum 3127-1 [CP020921]
1772121
1772047
-
His
GTG
-
¡û
>C11122884
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
120000
119925
-
Glu
CTC
[Ensembl]
¡û
>C11122883
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
120084
120011
-
Gln
CTG
[Ensembl]
¡û
>C11122882
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
120166
120091
-
Phe
GAA
[Ensembl]
¡û
>C11122838
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
229874
229948
+
Pro
TGG
[Ensembl]
¡û
>C11122839
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
244503
244577
+
Gln
TTG
[Ensembl]
¡û
>C11122840
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
245597
245690
+
SeC
TCA
[Ensembl]
¡û
>C11122841
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
285575
285667
+
Ser
GGA
[Ensembl]
¡û
>C11122881
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
310221
310145
-
Lys
TTT
[Ensembl]
¡û
>C11122842
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
335582
335658
+
Ile
GAT
[Ensembl]
¡û
>C11122843
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
335679
335754
+
Ala
TGC
[Ensembl]
¡û
>C11122880
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
352368
352277
-
Ser
CGA
[Ensembl]
¡û
>C11122844
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
385254
385330
+
Met
CAT
[Ensembl]
¡û
>C11122879
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
472448
472372
-
Arg
ACG
[Ensembl]
¡û
>C11122845
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
537675
537749
+
Trp
CCA
[Ensembl]
¡û
>C11122846
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
629435
629509
+
Met
CAT
[Ensembl]
¡û
>C11122847
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
684663
684738
+
Gly
TCC
[Ensembl]
¡û
>C11122848
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
684750
684826
+
Arg
TCT
[Ensembl]
¡û
>C11122849
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
689130
689205
+
Glu
TTC
[Ensembl]
¡û
>C11122850
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
689233
689307
+
Val
TAC
[Ensembl]
¡û
>C11122851
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
710930
711004
+
Met
CAT
[Ensembl]
¡û
>C11122852
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
741010
741100
+
Ser
TGA
[Ensembl]
¡û
>C11122853
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
744234
744320
+
Leu
GAG
[Ensembl]
¡û
>C11122854
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
778319
778394
+
Lys
CTT
[Ensembl]
¡û
>C11122855
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
778407
778481
+
Asn
GTT
[Ensembl]
¡û
>C11122856
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
780210
780294
+
Tyr
GTA
[Ensembl]
¡û
>C11122857
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
780298
780373
+
Thr
GGT
[Ensembl]
¡û
>C11122858
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
906381
906456
+
Thr
CGT
[Ensembl]
¡û
>C11122878
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
925783
925708
-
Thr
TGT
[Ensembl]
¡û
>C11122859
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
934018
934101
+
Leu
TAG
[Ensembl]
¡û
>C11122860
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
934115
934189
+
Gly
GCC
[Ensembl]
¡û
>C11122877
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1058826
1058750
-
Arg
CCT
[Ensembl]
¡û
>C11122876
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1072974
1072899
-
Ala
CGC
[Ensembl]
¡û
>C11122875
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1073071
1072995
-
Ile
GAT
[Ensembl]
¡û
>C11122874
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1127378
1127303
-
Ala
GGC
[Ensembl]
¡û
>C11122861
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1155315
1155401
+
Leu
CAG
[Ensembl]
¡û
>C11122862
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1155765
1155851
+
Leu
CAA
[Ensembl]
¡û
>C11122873
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1161399
1161324
-
Val
GAC
[Ensembl]
¡û
>C11122872
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1192124
1192050
-
Pro
CGG
[Ensembl]
¡û
>C11122871
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1270723
1270649
-
Pro
GGG
[Ensembl]
¡û
>C11122870
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1349791
1349717
-
Val
CAC
[Ensembl]
¡û
>C11122869
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1412292
1412201
-
Ser
GCT
[Ensembl]
¡û
>C11122863
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1574160
1574236
+
Asp
GTC
[Ensembl]
¡û
>C11122864
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1626886
1626960
+
Gly
CCC
[Ensembl]
¡û
>C11122865
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1626971
1627045
+
Cys
GCA
[Ensembl]
¡û
>C11122866
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1627054
1627138
+
Leu
TAA
[Ensembl]
¡û
>C11122868
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1896087
1896011
-
Arg
TCG
[Ensembl]
¡û
>C11122867
CP002690
Thermodesulfobiota
Thermodesulfobium narugense DSM 14796 [CP002690]
1896168
1896094
-
His
GTG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK