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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Thermoplasmatales archaeon E-plasma EplasmaContig2057
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>ENV09002304
ACXL01000006
Thermoplasmatales archaeon E-plasma EplasmaContig2057
4871
4800
-
Cys
GCA
[ENA]
¡û
>ENV09002303
ACXL01000006
Thermoplasmatales archaeon E-plasma EplasmaContig2057
4962
5037
+
Arg
GCG
[ENA]
¡û
>ENV09002305
ACXL01000007
Thermoplasmatales archaeon E-plasma EplasmaContig2057
23763
23690
-
Ala
GGC
[ENA]
¡û
>ENV09002306
ACXL01000008
Thermoplasmatales archaeon E-plasma EplasmaContig2057
33021
33093
+
Pseudo
GGG
[ENA]
¡û
>ENV09002309
ACXL01000008
Thermoplasmatales archaeon E-plasma EplasmaContig2057
156425
156350
-
Asp
GTC
[ENA]
¡û
>ENV09002307
ACXL01000008
Thermoplasmatales archaeon E-plasma EplasmaContig2057
169912
169987
+
Arg
TCG
[ENA]
¡û
>ENV09002308
ACXL01000008
Thermoplasmatales archaeon E-plasma EplasmaContig2057
176975
177054
+
Arg
TCT
[ENA]
¡û
>ENV09002316
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
35444
35360
-
Leu
GAG
[ENA]
¡û
>ENV09002315
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
55154
55079
-
Thr
TGT
[ENA]
¡û
>ENV09002314
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
78818
78746
-
Phe
GAA
[ENA]
¡û
>ENV09002313
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
82416
82344
-
Gln
TTG
[ENA]
¡û
>ENV09002312
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
187736
187665
-
Val
GAC
[ENA]
¡û
>ENV09002310
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
260738
260821
+
Ser
TGA
[ENA]
¡û
>ENV09002311
ACXL01000009
Thermoplasmatales archaeon E-plasma EplasmaContig2057
279006
279078
+
Val
CAC
[ENA]
¡û
>ENV09002322
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
2554
2481
-
Met
CAT
[ENA]
¡û
>ENV09002321
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
2630
2556
-
Asn
GTT
[ENA]
¡û
>ENV09002320
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
79267
79193
-
Gln
CTG
[ENA]
¡û
>ENV09002319
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
146483
146400
-
Ser
GGA
[ENA]
¡û
>ENV09002318
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
146686
146604
-
Ser
CGA
[ENA]
¡û
>ENV09002317
ACXL01000013
Thermoplasmatales archaeon E-plasma EplasmaContig2057
210009
210080
+
Ala
CGC
[ENA]
¡û
>ENV09002323
ACXL01000015
Thermoplasmatales archaeon E-plasma EplasmaContig2057
9692
9766
+
Lys
CTT
[ENA]
¡û
>ENV09002324
ACXL01000015
Thermoplasmatales archaeon E-plasma EplasmaContig2057
70204
70289
+
Leu
TAA
[ENA]
¡û
>ENV09002329
ACXL01000016
Thermoplasmatales archaeon E-plasma EplasmaContig2057
19851
19777
-
Pseudo
GTG
[ENA]
¡û
>ENV09002328
ACXL01000016
Thermoplasmatales archaeon E-plasma EplasmaContig2057
39363
39289
-
Met
CAT
[ENA]
¡û
>ENV09002325
ACXL01000016
Thermoplasmatales archaeon E-plasma EplasmaContig2057
118094
118178
+
Leu
CAA
[ENA]
¡û
>ENV09002326
ACXL01000016
Thermoplasmatales archaeon E-plasma EplasmaContig2057
132373
132446
+
Gly
CCC
[ENA]
¡û
>ENV09002327
ACXL01000016
Thermoplasmatales archaeon E-plasma EplasmaContig2057
134855
134773
-
Ser
GCT
[ENA]
¡û
>ENV09002331
ACXL01000017
Thermoplasmatales archaeon E-plasma EplasmaContig2057
79633
79561
-
Val
TAC
[ENA]
¡û
>ENV09002330
ACXL01000017
Thermoplasmatales archaeon E-plasma EplasmaContig2057
112766
112682
-
Leu
TAG
[ENA]
¡û
>ENV09002332
ACXL01000018
Thermoplasmatales archaeon E-plasma EplasmaContig2057
37925
37840
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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