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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Uncultured SUP05 cluster bacterium Contig34382
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>ENV09001918
ACSG01000001
Uncultured SUP05 cluster bacterium Contig34382
171
96
-
Asn
GTT
[ENA]
¡û
>ENV09001917
ACSG01000001
Uncultured SUP05 cluster bacterium Contig34382
7464
7379
-
Leu
GAG
[ENA]
¡û
>ENV09001919
ACSG01000003
Uncultured SUP05 cluster bacterium Contig34382
7248
7324
+
Arg
ACG
[ENA]
¡û
>ENV09001920
ACSG01000003
Uncultured SUP05 cluster bacterium Contig34382
7988
8063
+
Gly
GCC
[ENA]
¡û
>ENV09001921
ACSG01000003
Uncultured SUP05 cluster bacterium Contig34382
8117
8190
+
Cys
GCA
[ENA]
¡û
>ENV09001922
ACSG01000006
Uncultured SUP05 cluster bacterium Contig34382
1598
1524
-
Gln
TTG
[ENA]
¡û
>ENV09001923
ACSG01000007
Uncultured SUP05 cluster bacterium Contig34382
4965
5041
+
Met
CAT
[ENA]
¡û
>ENV09001924
ACSG01000011
Uncultured SUP05 cluster bacterium Contig34382
747
822
+
Phe
GAA
[ENA]
¡û
>ENV09001925
ACSG01000028
Uncultured SUP05 cluster bacterium Contig34382
19624
19700
+
Arg
CCG
[ENA]
¡û
>ENV09001927
ACSG01000031
Uncultured SUP05 cluster bacterium Contig34382
10796
10720
-
Asp
GTC
[ENA]
¡û
>ENV09001926
ACSG01000031
Uncultured SUP05 cluster bacterium Contig34382
10883
10808
-
Val
TAC
[ENA]
¡û
>ENV09001928
ACSG01000038
Uncultured SUP05 cluster bacterium Contig34382
32719
32644
-
Trp
CCA
[ENA]
¡û
>ENV09001929
ACSG01000039
Uncultured SUP05 cluster bacterium Contig34382
10495
10579
+
Tyr
GTA
[ENA]
¡û
>ENV09001930
ACSG01000039
Uncultured SUP05 cluster bacterium Contig34382
10600
10673
+
Gly
TCC
[ENA]
¡û
>ENV09001931
ACSG01000039
Uncultured SUP05 cluster bacterium Contig34382
10689
10764
+
Thr
GGT
[ENA]
¡û
>ENV09001932
ACSG01000040
Uncultured SUP05 cluster bacterium Contig34382
35382
35471
+
Ser
TGA
[ENA]
¡û
>ENV09001933
ACSG01000041
Uncultured SUP05 cluster bacterium Contig34382
6620
6704
+
Leu
TAG
[ENA]
¡û
>ENV09001934
ACSG01000049
Uncultured SUP05 cluster bacterium Contig34382
12579
12488
-
Ser
GCT
[ENA]
¡û
>ENV09001935
ACSG01000057
Uncultured SUP05 cluster bacterium Contig34382
1165
1241
+
Pro
TGG
[ENA]
¡û
>ENV09001936
ACSG01000057
Uncultured SUP05 cluster bacterium Contig34382
1298
1374
+
Arg
TCT
[ENA]
¡û
>ENV09001937
ACSG01000057
Uncultured SUP05 cluster bacterium Contig34382
1387
1462
+
His
GTG
[ENA]
¡û
>ENV09001939
ACSG01000066
Uncultured SUP05 cluster bacterium Contig34382
2451
2375
-
Arg
CCT
[ENA]
¡û
>ENV09001938
ACSG01000066
Uncultured SUP05 cluster bacterium Contig34382
4733
4809
+
Val
GAC
[ENA]
¡û
>ENV09001940
ACSG01000079
Uncultured SUP05 cluster bacterium Contig34382
256
181
-
Lys
TTT
[ENA]
¡û
>ENV09001941
ACSG01000087
Uncultured SUP05 cluster bacterium Contig34382
32859
32935
+
Ile
GAT
[ENA]
¡û
>ENV09001942
ACSG01000087
Uncultured SUP05 cluster bacterium Contig34382
33184
33259
+
Ala
TGC
[ENA]
¡û
>ENV09001943
ACSG01000089
Uncultured SUP05 cluster bacterium Contig34382
2480
2391
-
Ser
TGA
[ENA]
¡û
>ENV09001944
ACSG01000090
Uncultured SUP05 cluster bacterium Contig34382
15853
15939
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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