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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Unidentified eubacterium SCB49
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV080358
ABCO01000001
Unidentified eubacterium SCB49
55379
55303
-
Met
CAT
[ENA]
>WENV080359
ABCO01000001
Unidentified eubacterium SCB49
79612
79537
-
Cys
GCA
[ENA]
>WENV080360
ABCO01000001
Unidentified eubacterium SCB49
134565
134489
-
Gln
TTG
[ENA]
>WENV080361
ABCO01000001
Unidentified eubacterium SCB49
135027
134951
-
Cys
GCA
[ENA]
>WENV080362
ABCO01000001
Unidentified eubacterium SCB49
135114
135026
-
Tyr
GTA
[ENA]
>WENV080363
ABCO01000001
Unidentified eubacterium SCB49
182946
182868
-
Asn
GTT
[ENA]
>WENV080364
ABCO01000001
Unidentified eubacterium SCB49
352119
352203
+
Leu
CAA
[ENA]
>WENV080365
ABCO01000001
Unidentified eubacterium SCB49
409427
409516
+
Ser
GGA
[ENA]
>WENV080366
ABCO01000001
Unidentified eubacterium SCB49
575794
575704
-
Leu
TAA
[ENA]
>WENV080367
ABCO01000001
Unidentified eubacterium SCB49
575987
575912
-
Gly
GCC
[ENA]
>WENV080368
ABCO01000002
Unidentified eubacterium SCB49
168781
168704
-
Met
CAT
[ENA]
>WENV080369
ABCO01000002
Unidentified eubacterium SCB49
265687
265762
+
Phe
GAA
[ENA]
>WENV080370
ABCO01000002
Unidentified eubacterium SCB49
266340
266263
-
Val
TAC
[ENA]
>WENV080371
ABCO01000002
Unidentified eubacterium SCB49
330150
330066
-
Leu
TAG
[ENA]
>WENV080372
ABCO01000002
Unidentified eubacterium SCB49
400035
399957
-
Ala
TGC
[ENA]
>WENV080373
ABCO01000002
Unidentified eubacterium SCB49
400268
400192
-
Ile
GAT
[ENA]
>WENV080374
ABCO01000004
Unidentified eubacterium SCB49
153359
153284
-
Gln
TTG
[ENA]
>WENV080375
ABCO01000005
Unidentified eubacterium SCB49
102242
102320
+
His
GTG
[ENA]
>WENV080376
ABCO01000005
Unidentified eubacterium SCB49
210161
210249
+
Ser
GCT
[ENA]
>WENV080377
ABCO01000005
Unidentified eubacterium SCB49
210277
210354
+
Pro
TGG
[ENA]
>WENV080378
ABCO01000005
Unidentified eubacterium SCB49
210407
210486
+
Pro
TGG
[ENA]
>WENV080379
ABCO01000005
Unidentified eubacterium SCB49
210524
210600
+
Arg
TCT
[ENA]
>WENV080380
ABCO01000006
Unidentified eubacterium SCB49
61955
62033
+
Arg
TCG
[ENA]
>WENV080381
ABCO01000006
Unidentified eubacterium SCB49
197550
197463
-
Leu
GAG
[ENA]
>WENV080382
ABCO01000006
Unidentified eubacterium SCB49
197697
197620
-
Lys
TTT
[ENA]
>WENV080383
ABCO01000007
Unidentified eubacterium SCB49
157101
157179
+
Asp
GTC
[ENA]
>WENV080384
ABCO01000008
Unidentified eubacterium SCB49
85400
85322
-
Met
CAT
[ENA]
>WENV080385
ABCO01000009
Unidentified eubacterium SCB49
93513
93436
-
Trp
CCA
[ENA]
>WENV080386
ABCO01000009
Unidentified eubacterium SCB49
94975
94901
-
Thr
GGT
[ENA]
>WENV080387
ABCO01000009
Unidentified eubacterium SCB49
95154
95077
-
Gly
TCC
[ENA]
>WENV080388
ABCO01000009
Unidentified eubacterium SCB49
95438
95352
-
Tyr
GTA
[ENA]
>WENV080389
ABCO01000009
Unidentified eubacterium SCB49
95576
95498
-
Thr
TGT
[ENA]
>WENV080390
ABCO01000011
Unidentified eubacterium SCB49
45294
45370
+
Ile
GAT
[ENA]
>WENV080391
ABCO01000011
Unidentified eubacterium SCB49
45527
45605
+
Ala
TGC
[ENA]
>WENV080392
ABCO01000013
Unidentified eubacterium SCB49
10913
11002
+
Ser
TGA
[ENA]
>WENV080393
ABCO01000017
Unidentified eubacterium SCB49
3233
3157
-
Glu
TTC
[ENA]
>WENV080394
ABCO01000018
Unidentified eubacterium SCB49
6202
6124
-
Ala
TGC
[ENA]
>WENV080395
ABCO01000018
Unidentified eubacterium SCB49
6435
6359
-
Ile
GAT
[ENA]
>WENV080396
ABCO01000023
Unidentified eubacterium SCB49
816
892
+
Ile
GAT
[ENA]
>WENV080397
ABCO01000023
Unidentified eubacterium SCB49
1099
1177
+
Ala
TGC
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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