This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
Varidnaviria
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>VRL181000664
LC332918
Varidnaviria
Heliothis virescens ascovirus 3j (LC332918)
44822
44750
-
Ile
TAT
[ENA]
¡û
>VRL181000496
AP017398
Varidnaviria
Tokyovirus A1 (AP017398)
5265
5337
+
His
GTG
[ENA]
¡û
>VRL181000497
AP017398
Varidnaviria
Tokyovirus A1 (AP017398)
5341
5424
+
Leu
TAA
[ENA]
¡û
>VRL181000722
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
74211
74139
-
Tyr
GTA
[ENA]
¡û
>VRL181000721
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
74313
74242
-
Tyr
GTA
[ENA]
¡û
>VRL181000720
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
74477
74406
-
Tyr
GTA
[ENA]
¡û
>VRL181000719
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
113827
113754
-
Phe
GAA
[ENA]
¡û
>VRL181000718
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
114080
114009
-
Thr
CGT
[ENA]
¡û
>VRL181000717
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
116700
116628
-
Cys
GCA
[ENA]
¡û
>VRL181000716
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
116772
116701
-
Trp
CCA
[ENA]
¡û
>VRL181000715
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
125330
125259
-
Arg
TCT
[ENA]
¡û
>VRL181000714
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
125402
125331
-
Ile
GAT
[ENA]
¡û
>VRL181000713
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
125477
125403
-
Arg
TCT
[ENA]
¡û
>VRL181000712
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
125550
125478
-
Asn
GTT
[ENA]
¡û
>VRL183000204
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
135648
135575
-
Thr
AGT
[ENA]
¡û
>VRL181000711
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
135793
135722
-
Met
CAT
[ENA]
¡û
>VRL181000710
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
135866
135795
-
Met
CAT
[ENA]
¡û
>VRL181000709
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
136055
135984
-
Arg
GCG
[ENA]
¡û
>VRL181000708
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
138938
138867
-
His
GTG
[ENA]
¡û
>VRL181000707
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
139011
138939
-
Pro
AGG
[ENA]
¡û
>VRL181000706
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
146188
146117
-
Ala
TGC
[ENA]
¡û
>VRL181000705
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
146444
146373
-
Asp
GTC
[ENA]
¡û
>VRL181000704
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
146517
146446
-
Ala
AGC
[ENA]
¡û
>VRL181000703
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
148655
148583
-
Val
AAC
[ENA]
¡û
>VRL181000702
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
148731
148656
-
Asp
GTC
[ENA]
¡û
>VRL181000701
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
161600
161520
-
Leu
TAA
[ENA]
¡û
>VRL181000700
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
161685
161601
-
Leu
CAA
[ENA]
¡û
>VRL181000699
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
161806
161725
-
Leu
CAA
[ENA]
¡û
>VRL181000698
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
161889
161807
-
Leu
CAG
[ENA]
¡û
>VRL181000697
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
277171
277100
-
Val
TAC
[ENA]
¡û
>VRL181000696
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
277603
277533
-
Ala
CGC
[ENA]
¡û
>VRL181000695
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
277746
277675
-
Val
GAC
[ENA]
¡û
>VRL181000694
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
286333
286249
-
Leu
TAA
[ENA]
¡û
>VRL181000693
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
286518
286446
-
Thr
TGT
[ENA]
¡û
>VRL181000692
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
286590
286519
-
Val
CAC
[ENA]
¡û
>VRL181000691
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
286715
286642
-
Arg
CCT
[ENA]
¡û
>VRL181000690
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
286786
286715
-
Arg
TCG
[ENA]
¡û
>VRL181000689
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
294084
294012
-
Ile
TAT
[ENA]
¡û
>VRL181000688
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
294156
294085
-
Ile
GAT
[ENA]
¡û
>VRL181000687
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
294230
294157
-
Lys
CTT
[ENA]
¡û
>VRL181000686
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
294302
294231
-
Lys
TTT
[ENA]
¡û
>VRL181000685
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
297639
297569
-
Lys
TTT
[ENA]
¡û
>VRL181000684
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
297712
297640
-
Glu
TTC
[ENA]
¡û
>VRL181000683
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
297784
297713
-
Glu
CTC
[ENA]
¡û
>VRL181000682
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
297857
297785
-
Glu
TTC
[ENA]
¡û
>VRL181000681
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
297929
297858
-
Gly
GCC
[ENA]
¡û
>VRL181000680
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
298001
297930
-
Glu
TTC
[ENA]
¡û
>VRL182000028
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
304095
304024
-
Gln
CTG
[ENA]
¡û
>VRL181000679
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
304168
304096
-
Gln
TTG
[ENA]
¡û
>VRL181000678
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
304283
304211
-
Gln
TTG
[ENA]
¡û
>VRL181000677
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
304372
304284
-
Ser
GCT
[ENA]
¡û
>VRL181000676
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831320
831239
-
Ser
CGA
[ENA]
¡û
>VRL181000675
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831440
831358
-
Ser
GCT
[ENA]
¡û
>VRL181000674
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831544
831473
-
Gln
TTG
[ENA]
¡û
>VRL182000029
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831651
831579
-
Gln
TTG
[ENA]
¡û
>VRL181000673
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831736
831652
-
Ser
ACT
[ENA]
¡û
>VRL181000672
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831853
831771
-
Ser
AGA
[ENA]
¡û
>VRL181000671
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
831977
831898
-
Ser
GGA
[ENA]
¡û
>VRL181000670
MF405918
Varidnaviria
Tupanvirus deep ocean (MF405918)
832094
832012
-
Ser
TGA
[ENA]
¡û
>VRL181000653
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
72719
72647
-
Tyr
GTA
[ENA]
¡û
>VRL181000652
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
72821
72750
-
Tyr
GTA
[ENA]
¡û
>VRL181000651
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
72930
72859
-
Tyr
GTA
[ENA]
¡û
>VRL181000650
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
111287
111216
-
Phe
GAA
[ENA]
¡û
>VRL181000649
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
111359
111288
-
Phe
GAA
[ENA]
¡û
>VRL181000648
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
111541
111470
-
Thr
CGT
[ENA]
¡û
>VRL181000647
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
125484
125413
-
Ile
GAT
[ENA]
¡û
>VRL183000169
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
125559
125485
-
Arg
TCT
[ENA]
¡û
>VRL181000646
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
125632
125561
-
Asn
GTT
[ENA]
¡û
>VRL183000168
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
125812
125739
-
Asn
GTT
[ENA]
¡û
>VRL183000167
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
134993
134920
-
Thr
AGT
[ENA]
¡û
>VRL181000645
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
135138
135067
-
Met
CAT
[ENA]
¡û
>VRL181000644
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
135211
135139
-
Trp
CCA
[ENA]
¡û
>VRL181000643
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
135356
135285
-
Arg
GCG
[ENA]
¡û
>VRL181000642
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
136126
136055
-
His
GTG
[ENA]
¡û
>VRL181000641
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
136198
136127
-
Pro
AGG
[ENA]
¡û
>VRL181000640
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
143258
143185
-
Pro
TGG
[ENA]
¡û
>VRL181000639
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
143402
143331
-
Ala
TGC
[ENA]
¡û
>VRL181000638
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
143660
143588
-
Ala
AGC
[ENA]
¡û
>VRL181000637
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
145444
145373
-
Gly
TCC
[ENA]
¡û
>VRL181000636
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
145516
145445
-
Asp
GTC
[ENA]
¡û
>VRL181000635
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
145589
145518
-
Ala
AGC
[ENA]
¡û
>VRL181000634
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
145716
145644
-
Val
GAC
[ENA]
¡û
>VRL181000633
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
145792
145717
-
Asp
GTC
[ENA]
¡û
>VRL181000632
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
157232
157149
-
Leu
TAA
[ENA]
¡û
>VRL181000631
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
157368
157284
-
Leu
CAA
[ENA]
¡û
>VRL181000630
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
157486
157404
-
Leu
CAG
[ENA]
¡û
>VRL181000629
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
157568
157488
-
Leu
AAG
[ENA]
¡û
>VRL181000628
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
271209
271139
-
Val
TAC
[ENA]
¡û
>VRL181000627
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
271635
271565
-
Ala
CGC
[ENA]
¡û
>VRL181000626
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
271772
271702
-
Val
GAC
[ENA]
¡û
>VRL181000625
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
279992
279908
-
Leu
TAA
[ENA]
¡û
>VRL181000624
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
280177
280106
-
Thr
TGT
[ENA]
¡û
>VRL181000623
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
280249
280178
-
Val
CAC
[ENA]
¡û
>VRL181000622
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
280322
280250
-
Arg
CCT
[ENA]
¡û
>VRL181000621
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
280394
280323
-
Arg
TCG
[ENA]
¡û
>VRL181000620
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
285446
285374
-
Ile
TAT
[ENA]
¡û
>VRL181000619
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
285518
285447
-
Ile
GAT
[ENA]
¡û
>VRL181000618
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
285592
285520
-
Lys
CTT
[ENA]
¡û
>VRL181000617
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
285664
285593
-
Lys
TTT
[ENA]
¡û
>VRL181000616
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
288292
288221
-
Lys
TTT
[ENA]
¡û
>VRL181000615
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
288365
288294
-
Glu
TTC
[ENA]
¡û
>VRL181000614
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
288438
288366
-
Glu
TTC
[ENA]
¡û
>VRL181000613
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
288510
288439
-
Gly
GCC
[ENA]
¡û
>VRL181000612
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
288582
288512
-
Glu
TTC
[ENA]
¡û
>VRL181000611
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
294609
294538
-
Gln
CTG
[ENA]
¡û
>VRL181000610
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
294681
294610
-
Gln
TTG
[ENA]
¡û
>VRL182000026
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
294786
294714
-
Gln
TTG
[ENA]
¡û
>VRL181000609
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
294874
294787
-
Ser
GCT
[ENA]
¡û
>VRL181000608
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
816494
816411
-
Ser
GCT
[ENA]
¡û
>VRL181000607
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
816599
816527
-
Gln
TTG
[ENA]
¡û
>VRL182000027
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
816672
816599
-
Gln
TTG
[ENA]
¡û
>VRL181000606
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
816755
816673
-
Ser
AGA
[ENA]
¡û
>VRL181000605
KY523104
Varidnaviria
Tupanvirus soda lake (KY523104)
816995
816912
-
Ser
TGA
[ENA]
¡û
>VRL181000655
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
60048
60130
+
Leu
TAA
[ENA]
¡û
>VRL181000656
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
60135
60209
+
Ile
TAT
[ENA]
¡û
>VRL181000657
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
60823
60894
+
Gly
TCC
[ENA]
¡û
>VRL183000176
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
60898
60970
+
Thr
AGT
[ENA]
¡û
>VRL181000658
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
60976
61047
+
Gln
CTG
[ENA]
¡û
>VRL181000659
LC015647
Varidnaviria
Yellowstone lake phycodnavirus 1 (LC015647)
61048
61122
+
Asn
GTT
[ENA]
¡û
>VRL183000178
LC015648
Varidnaviria
Yellowstone lake phycodnavirus 2 (LC015648)
79698
79624
-
Thr
AGT
[ENA]
¡û
>VRL181000660
LC015648
Varidnaviria
Yellowstone lake phycodnavirus 2 (LC015648)
80234
80161
-
Ile
TAT
[ENA]
¡û
>VRL181000661
LC015649
Varidnaviria
Yellowstone lake phycodnavirus 3 (LC015649)
52689
52762
+
Gln
CTG
[ENA]
¡û
>VRL181000662
LC015649
Varidnaviria
Yellowstone lake phycodnavirus 3 (LC015649)
55483
55557
+
Arg
TCT
[ENA]
¡û
>VRL181000663
LC015649
Varidnaviria
Yellowstone lake phycodnavirus 3 (LC015649)
55560
55646
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK