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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
unclassified archaeal dsDNA viruses
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>PHG0100031
AF222060
unclassified archaeal dsDNA viruses
Halorubrum phage HF2 ECOR-9 (AF222060)
18508
18584
+
Arg
TCT
[ENA]
¡û
>PHG0100032
AF222060
unclassified archaeal dsDNA viruses
Halorubrum phage HF2 ECOR-9 (AF222060)
20735
20810
+
Asn
GTT
[ENA]
¡û
>PHG0100033
AF222060
unclassified archaeal dsDNA viruses
Halorubrum phage HF2 ECOR-9 (AF222060)
74699
74628
-
Pro
TGG
[ENA]
¡û
>PHG14102131
KC292029
unclassified archaeal dsDNA viruses
Halovirus HCTV-1 Gb1 (KC292029)
28506
28432
-
Gln
TTG
[ENA]
¡û
>PHG14102130
KC292027
unclassified archaeal dsDNA viruses
Halovirus HCTV-5 Gb1 (KC292027)
28959
28885
-
Gln
TTG
[ENA]
¡û
>PHG0100230
AY190604
unclassified archaeal dsDNA viruses
Halovirus HF1 PaP3 (AY190604)
18508
18584
+
Arg
TCT
[ENA]
¡û
>PHG0100231
AY190604
unclassified archaeal dsDNA viruses
Halovirus HF1 PaP3 (AY190604)
20735
20810
+
Asn
GTT
[ENA]
¡û
>PHG0100232
AY190604
unclassified archaeal dsDNA viruses
Halovirus HF1 PaP3 (AY190604)
72927
72856
-
Pro
TGG
[ENA]
¡û
>PHG14102129
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
42683
42609
-
Val
GAC
[ENA]
¡û
>PHG14102128
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
42762
42688
-
Val
TAC
[ENA]
¡û
>PHG14102127
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
42840
42770
-
Pro
TGG
[ENA]
¡û
>PHG14102126
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
45613
45530
-
Leu
CAA
[ENA]
¡û
>PHG14102125
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
45700
45617
-
Leu
GAG
[ENA]
¡û
>PHG14102124
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
46430
46355
-
Arg
TCT
[ENA]
¡û
>PHG14102123
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
46775
46700
-
Arg
TCG
[ENA]
¡û
>PHG14102122
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
48085
48011
-
Ile
GAT
[ENA]
¡û
>PHG14102121
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
48162
48088
-
Gln
CTG
[ENA]
¡û
>PHG14300351
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
48320
48250
-
Ile
GAT
[ENA]
¡û
>PHG14102120
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
48876
48804
-
Lys
TTT
[ENA]
¡û
>PHG14102119
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
48952
48880
-
Thr
GGT
[ENA]
¡û
>PHG14102118
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
49029
48954
-
Thr
CGT
[ENA]
¡û
>PHG14102117
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
49103
49031
-
Thr
TGT
[ENA]
¡û
>PHG14600093
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
49328
49226
-
Ala
TGC
[ENA]
¡û
>PHG14102116
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
50194
50107
-
Met
CAT
[ENA]
¡û
>PHG14102115
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
50271
50195
-
Lys
CTT
[ENA]
¡û
>PHG14102114
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
50347
50274
-
Tyr
GTA
[ENA]
¡û
>PHG14102113
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
50544
50474
-
Gly
GCC
[ENA]
¡û
>PHG14102112
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
50619
50549
-
Gly
TCC
[ENA]
¡û
>PHG14200161
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
51710
51636
-
Phe
GAA
[ENA]
¡û
>PHG14102111
KC292026
unclassified archaeal dsDNA viruses
Halovirus HGTV-1 Gb1 (KC292026)
53420
53348
-
Arg
GCG
[ENA]
¡û
>PHG14102108
KC292022
unclassified archaeal dsDNA viruses
Halovirus HRTV-5 Gb1 (KC292022)
2936
3007
+
Pro
TGG
[ENA]
¡û
>PHG14102110
KC292022
unclassified archaeal dsDNA viruses
Halovirus HRTV-5 Gb1 (KC292022)
55944
55871
-
Asn
GTT
[ENA]
¡û
>PHG14102109
KC292022
unclassified archaeal dsDNA viruses
Halovirus HRTV-5 Gb1 (KC292022)
58168
58092
-
Arg
TCT
[ENA]
¡û
>PHG14102107
KC292021
unclassified archaeal dsDNA viruses
Halovirus HRTV-7 Gb1 (KC292021)
45885
45813
-
Gln
TTG
[ENA]
¡û
>PHG14102104
KC292020
unclassified archaeal dsDNA viruses
Halovirus HRTV-8 Gb1 (KC292020)
3000
3071
+
Pro
TGG
[ENA]
¡û
>PHG14102106
KC292020
unclassified archaeal dsDNA viruses
Halovirus HRTV-8 Gb1 (KC292020)
52495
52422
-
Asn
GTT
[ENA]
¡û
>PHG14102105
KC292020
unclassified archaeal dsDNA viruses
Halovirus HRTV-8 Gb1 (KC292020)
53707
53635
-
Gly
TCC
[ENA]
¡û
>PHG14102001
KC117376
unclassified archaeal dsDNA viruses
Halovirus HSTV-2 TN106 (KC117376)
46404
46332
-
Gln
TTG
[ENA]
¡û
>PHG14102002
KC117377
unclassified archaeal dsDNA viruses
Halovirus HVTV-1 TN106 (KC117377)
25380
25306
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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