tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.105933 (88 seq.)
>W1710809840 LKFB01000005 Betaproteobacteria Comamonas thiooxydans [LKFB] 49003 48919 - Leu GAG [ENA] ¡û
>W1710944106 LOQE01000001 Betaproteobacteria Tepidimonas taiwanensis [LOQE] 169620 169536 - Leu GAG [ENA] ¡û
>W1710990950 LPXH01000034 Betaproteobacteria Comamonas kerstersii 12322-1 [LPXH] 170082 170166 + Leu GAG [ENA] ¡û
>W1711135991 LUZR01000066 Betaproteobacteria Burkholderiales bacterium Beta_02 [LUZR] 19942 19858 - Leu GAG [ENA] ¡û
>W1711268806 LZDH01000056 Betaproteobacteria Tepidimonas fonticaldi [LZDH] 522971 523055 + Leu GAG [ENA] ¡û
>W1711504511 MKUQ01000010 Betaproteobacteria Burkholderiales bacterium 70-64 [MKUQ] 181614 181530 - Leu GAG [ENA] ¡û
>W1711628354 MPOE01000005 Betaproteobacteria Comamonas kerstersii 202149 [MPOE] 235390 235474 + Leu GAG [ENA] ¡û
>W1711628478 MPOF01000035 Betaproteobacteria Comamonas kerstersii 121606 [MPOF] 234937 235021 + Leu GAG [ENA] ¡û
>W131178092 ARLH01000085 Betaproteobacteria Caldimonas manganoxidans ATCC BAA-369 [ARLH] 54377 54293 - Leu GAG [ENA] ¡û
>W1712110544 NJIH01000010 Betaproteobacteria Candidimonas nitroreducens [NJIH] 70768 70684 - Leu GAG [ENA] ¡û
>C171098264 CP019697 Betaproteobacteria Paenalcaligenes hominis 15S00501 [CP019697] 1068367 1068283 - Leu GAG - ¡û
>C171103242 CP020046 Betaproteobacteria Thiomonas intermedia ATCC 15466 [CP020046] 2547860 2547944 + Leu GAG - ¡û
>C171104909 CP020121 Betaproteobacteria Comamonas kerstersii 8943 [CP020121] 376817 376733 - Leu GAG - ¡û
>w019685 AAUJ01000005 Betaproteobacteria Comamonas testosteroni KF-1 [AAUJ] 517266 517350 + Leu GAG [ENA] ¡û
>WENV180103086 OAPA01001601 [OAPA] marine metagenome; ENVO:00002010 910 826 - Leu GAG [ENA] ¢þ
>WENV180114280 OAPS01002566 [OAPS] marine metagenome; sea water 1069 1153 + Leu GAG [ENA] ¢þ
>WENV180283827 OBID01003835 [OBID] metagenome; sludge 1193 1277 + Leu GAG [ENA] ¢þ
>WENV180360827 OBNU01032777 [OBNU] marine metagenome; ENVO:00000021 'freshwater lake 36 120 + Leu GAG [ENA] ¢þ
>WENV180369101 OBOG01025507 [OBOG] marine metagenome; seawater 488 404 - Leu GAG [ENA] ¢þ
>WENV180377459 OBON01026660 [OBON] marine metagenome; sea water 645 561 - Leu GAG [ENA] ¢þ
>WENV181231903 OFEK01084741 [OFEK] activated sludge metagenome; Anaerobic digester 320 404 + Leu GAG [ENA] ¢þ
>WENV181311492 OFJB01003002 [OFJB] sludge metagenome; sludge 2672 2588 - Leu GAG [ENA] ¢þ
>WENV181311566 OFJB01004582 [OFJB] sludge metagenome; sludge 3489 3573 + Leu GAG [ENA] ¢þ
>WENV181411007 OGCI01010407 [OGCI] hot springs metagenome; Hot spring water 1667 1583 - Leu GAG [ENA] ¢þ
>W141139309 AWNL01000051 Betaproteobacteria Bordetella trematum CCUG 13902 [AWNL] 986 902 - Leu GAG [ENA] ¡û
>WENV181414192 OGCL01000088 [OGCL] hot springs metagenome; Hot spring water 84774 84858 + Leu GAG [ENA] ¢þ
>WENV181415375 OGCL01009377 [OGCL] hot springs metagenome; Hot spring water 2959 2875 - Leu GAG [ENA] ¢þ
>WENV181944674 OGZA01008237 [OGZA] human gut metagenome; faeces 2214 2130 - Leu GAG [ENA] ¢þ
>W141238238 BBJZ01000006 Betaproteobacteria Comamonas testosteroni [BBJZ] 163127 163043 - Leu GAG [ENA] ¡û
>WENV182578770 OJGP01002171 [OJGP] seawater metagenome; Sea water 2428 2344 - Leu GAG [ENA] ¢þ
>W141277445 JAEP01000003 Betaproteobacteria Bordetella petrii J51 [JAEP] 198068 197984 - Leu GAG [ENA] ¡û
>WENV183678596 ORJL011898552 [ORJL] groundwater metagenome; groundwater 1442 1358 - Leu GAG [ENA] ¢þ
>ENV08000754 ABMI01078031 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 103 19 - Leu GAG [ENA] ¡û
>WENV183710166 PDWI01040915 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2386 2302 - Leu GAG [ENA] ¢þ
>WENV183741211 PJUF01057821 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 265 181 - Leu GAG [ENA] ¢þ
>WENV170018719 BBPD01000496 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 47475 47391 - Leu GAG [ENA] ¢þ
>WENV170019808 BBPE01000709 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 24338 24254 - Leu GAG [ENA] ¢þ
>WENV170652826 JRYH01038928 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 959 1043 + Leu GAG [ENA] ¢þ
>WENV170688688 LFRM01258042 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 444 528 + Leu GAG [ENA] ¢þ
>C181169423 CP028901 Betaproteobacteria Orrella marina HZ20 [CP028901] 2326071 2325987 - Leu GAG - ¡û
>C191004286 AP018718 Betaproteobacteria Sulfuricystis multivorans J5B [AP018718] 1216701 1216785 + Leu GAG - ¡û
>C191007515 AP019373 Betaproteobacteria Sulfuricystis thermophila M52 [AP019373] 1185285 1185369 + Leu GAG - ¡û
>C191012245 CP016340 Betaproteobacteria Bordetella trematum F581 [CP016340] 3344392 3344308 - Leu GAG - ¡û
>C191116577 CP033936 Betaproteobacteria Kerstersia gyiorum SWMUKG01 [CP033936] 1819443 1819527 + Leu GAG - ¡û
>W1910890545 NEVI01000005 Betaproteobacteria Bordetella genomosp. 7 7 AU23756 [NEVI] 204868 204952 + Leu GAG [ENA] ¡û
>W1910890850 NEVO01000004 Betaproteobacteria Bordetella genomosp. 4 4 AU14378 [NEVO] 240899 240983 + Leu GAG [ENA] ¡û
>W1910890958 NEVQ01000008 Betaproteobacteria Bordetella genomosp. 4 4 AU9919 [NEVQ] 131742 131826 + Leu GAG [ENA] ¡û
>W1911701428 QNUI01000019 Betaproteobacteria Azohydromonas sediminis YIM 73032 [QNUI] 16926 17010 + Leu GAG [ENA] ¡û
>W1911702176 QOAZ01000005 Betaproteobacteria Azohydromonas sediminis SYSU G00088 [QOAZ] 68896 68980 + Leu GAG [ENA] ¡û
>W1810062094 PDNV01000006 Betaproteobacteria Pollutimonas nitritireducens JR1/69-2-13 [PDNV] 327727 327643 - Leu GAG [ENA] ¡û
>W1810273273 PSNX01000009 Betaproteobacteria Caldimonas caldifontis BCRC 80649 [PSNX] 53807 53723 - Leu GAG [ENA] ¡û
>W1810580244 QETA01000001 Betaproteobacteria Corticimicrobacter populi 3d-2-2 [QETA] 271469 271553 + Leu GAG [ENA] ¡û
>W1810889228 QURR01000011 Betaproteobacteria Comamonas testosteroni SWCO2 [QURR] 6845 6929 + Leu GAG [ENA] ¡û
>SRA1052245 SRR035098.166590 454 Sequencing (SRP001819) 61 145 + Leu GAG [SRA]
>SRA1052587 SRR035098.232658 454 Sequencing (SRP001819) 61 145 + Leu GAG [SRA]
>SRA1053326 SRR035098.382825 454 Sequencing (SRP001819) 418 502 + Leu GAG [SRA]
>ENV09004077 ADIG01005316 Groundwater metagenome 4000601.lucy.pga.C1 555 639 + Leu GAG [ENA] ¡û
>W1510015191 BBQP01000003 Betaproteobacteria Comamonas testosteroni KF712 [BBQP] 303288 303372 + Leu GAG [ENA] ¡û
>W1510019158 BBVD01000001 Betaproteobacteria Comamonas thiooxydans DSM 17888 [BBVD] 160511 160427 - Leu GAG [ENA] ¡û
>W10119385 ADVQ01000036 Betaproteobacteria Comamonas thiooxydans S44 [ADVQ] 100416 100500 + Leu GAG [ENA] ¡û
>W1511403227 JTKY01000029 Betaproteobacteria Tepidimonas taiwanensis VT154-175 [JTKY] 55205 55121 - Leu GAG [ENA] ¡û
>W11125605 ADVQ01000036 Betaproteobacteria Comamonas thiooxydans S44 [ADVQ] 100416 100500 + Leu GAG [ENA] ¡û
>W1511584168 LAVC01000013 Betaproteobacteria Comamonas thiooxydans KY3 [LAVC] 103585 103669 + Leu GAG [ENA] ¡û
>W121123601 BAEC01000102 Betaproteobacteria Comamonas testosteroni NBRC 100989 [BAEC] 157760 157676 - Leu GAG [ENA] ¡û
>W1610028401 AWOR01000001 Betaproteobacteria Comamonas testosteroni [AWOR] 684190 684274 + Leu GAG [ENA] ¡û
>W1610028858 AWTN01000084 Betaproteobacteria Comamonas thiooxydans testosteroni [AWTN] 250868 250952 + Leu GAG [ENA] ¡û
>W1610074137 BCWK01000017 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 18373 18457 + Leu GAG [ENA] ¡û
>W1610085434 CTRJ01000012 Betaproteobacteria Thiomonas arsenitoxydans CB6 [CTRJ] 229427 229511 + Leu GAG [ENA] ¡û
>W1610085528 CTRL01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO7 [CTRL] 84821 84737 - Leu GAG [ENA] ¡û
>W1610085578 CTRM01000059 Betaproteobacteria Thiomonas sp. CB3 [CTRM] 235266 235182 - Leu GAG [ENA] ¡û
>W1610447539 FKBR01000022 Betaproteobacteria Bordetella trematum [FKBR] 33427 33343 - Leu GAG [ENA] ¡û
>W1610447645 FKBT01000025 Betaproteobacteria Bordetella trematum [FKBT] 150193 150277 + Leu GAG [ENA] ¡û
>C131007298 CP003805 Betaproteobacteria Candidatus Kinetoplastibacterium oncopeltii TCC290E [CP003805] 551930 551846 - Leu GAG [Ensembl] ¡û
>W1610610000 LFYP01000125 Betaproteobacteria Comamonas kerstersii [LFYP] 36097 36013 - Leu GAG [ENA] ¡û
>W1610673895 LKFB01000005 Betaproteobacteria Comamonas thiooxydans [LKFB] 49003 48919 - Leu GAG [ENA] ¡û
>W1610800406 LOQE01000001 Betaproteobacteria Tepidimonas taiwanensis [LOQE] 169620 169536 - Leu GAG [ENA] ¡û
>W1610845622 LPXH01000034 Betaproteobacteria Comamonas kerstersii 12322-1 [LPXH] 170082 170166 + Leu GAG [ENA] ¡û
>W1610947111 LUZR01000066 Betaproteobacteria Burkholderiales bacterium Beta_02 [LUZR] 19942 19858 - Leu GAG [ENA] ¡û
>W1611029618 LZDH01000056 Betaproteobacteria Tepidimonas fonticaldi [LZDH] 522971 523055 + Leu GAG [ENA] ¡û
>W1710024303 AWOR01000001 Betaproteobacteria Comamonas testosteroni [AWOR] 684190 684274 + Leu GAG [ENA] ¡û
>W1710026228 AWTN01000084 Betaproteobacteria Comamonas thiooxydans testosteroni [AWTN] 250868 250952 + Leu GAG [ENA] ¡û
>W1710071255 BCWK01000017 Betaproteobacteria Caldimonas taiwanensis NBRC 104434 [BCWK] 18373 18457 + Leu GAG [ENA] ¡û
>W1710090023 CTRJ01000012 Betaproteobacteria Thiomonas arsenitoxydans CB6 [CTRJ] 229427 229511 + Leu GAG [ENA] ¡û
>W1710090117 CTRL01000047 Betaproteobacteria Thiomonas arsenitoxydans ACO7 [CTRL] 84821 84737 - Leu GAG [ENA] ¡û
>W1710090167 CTRM01000059 Betaproteobacteria Thiomonas sp. CB3 [CTRM] 235266 235182 - Leu GAG [ENA] ¡û
>W1710447167 FKBR01000022 Betaproteobacteria Bordetella trematum [FKBR] 33427 33343 - Leu GAG [ENA] ¡û
>W1710447273 FKBT01000025 Betaproteobacteria Bordetella trematum [FKBT] 150193 150277 + Leu GAG [ENA] ¡û
>W1710731345 LFYP01000125 Betaproteobacteria Comamonas kerstersii [LFYP] 36097 36013 - Leu GAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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