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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.108171 (10 seq.)
>FG090800108
CR382127
Ascomycota
Yarrowia lipolytica CLIB122
163182
163083
-
Leu
AAG
[ENA]
¡û
>FG090800111
CR382128
Ascomycota
Yarrowia lipolytica CLIB122
44278
44377
+
Leu
AAG
[ENA]
¡û
>FG090800127
CR382129
Ascomycota
Yarrowia lipolytica CLIB122
976064
976163
+
Leu
AAG
[ENA]
¡û
>FG090800132
CR382129
Ascomycota
Yarrowia lipolytica CLIB122
2484477
2484576
+
Leu
AAG
[ENA]
¡û
>FG090800144
CR382130
Ascomycota
Yarrowia lipolytica CLIB122
435291
435390
+
Leu
AAG
[ENA]
¡û
>FG090800149
CR382130
Ascomycota
Yarrowia lipolytica CLIB122
2492601
2492700
+
Leu
AAG
[ENA]
¡û
>FG090800165
CR382131
Ascomycota
Yarrowia lipolytica CLIB122
1916796
1916697
-
Leu
AAG
[ENA]
¡û
>FG091800027
CR382127
Ascomycota
Yarrowia lipolytica CLIB122
163183
163082
-
Leu
AAG
[ENA]
¡û
>FG091800045
CR382127
Ascomycota
Yarrowia lipolytica CLIB122
1594263
1594161
-
Leu
AAG
[ENA]
¡û
>FG091800054
CR382132
Ascomycota
Yarrowia lipolytica CLIB122
2179698
2179797
+
Leu
AAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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