tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.111196 (105 seq.)
>W1710785345 LJHT01000111 Betaproteobacteria beta proteobacterium AAP51 [LJHT] 53656 53741 + Tyr GTA [ENA] ¡û
>W1710877833 LMQL01000008 Betaproteobacteria Ramlibacter sp. Leaf400 [LMQL] 550 465 - Tyr GTA [ENA] ¡û
>W1710893450 LNET01000108 Betaproteobacteria Burkholderiales bacterium Ga0077543 [LNET] 641 556 - Tyr GTA [ENA] ¡û
>W1711386270 MEFD01000011 Betaproteobacteria Rubrivivax sp. SCN 71-131 [MEFD] 6936 7021 + Tyr GTA [ENA] ¡û
>W1711394926 MESO01000038 Betaproteobacteria Burkholderiales bacterium RIFOXYC12_FULL_65_23 [MESO] 461 376 - Tyr GTA [ENA] ¡û
>W1711453676 MIYM01000008 Betaproteobacteria Hydrogenophaga sp. PML113 [MIYM] 217761 217846 + Tyr GTA [ENA] ¡û
>W1711502448 MKSS01000016 Betaproteobacteria Hydrogenophaga sp. 70-12 [MKSS] 25936 26021 + Tyr GTA [ENA] ¡û
>W131052555 AMZA01001398 Betaproteobacteria beta proteobacterium FWI2 [AMZA] 366 281 - Tyr GTA [ENA] ¡û
>W131063332 ANKP01000221 Betaproteobacteria Cupriavidus sp. HMR-1 [ANKP] 24178 24093 - Tyr GTA [ENA] ¡û
>W131214635 ATUI01000035 Betaproteobacteria Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 [ATUI] 16541 16626 + Tyr GTA [ENA] ¡û
>W131226942 AUET01000010 Betaproteobacteria Comamonadaceae bacterium URHA0028 [AUET] 1347 1262 - Tyr GTA [ENA] ¡û
>W131236696 AUMO01000043 Betaproteobacteria Azohydromonas australica DSM 1124 [AUMO] 30029 29944 - Tyr GTA [ENA] ¡û
>C013927 CP000555 Betaproteobacteria Methylibium petroleiphilum PM1 [CP000555] 3669046 3668961 - Tyr GTA [Ensembl] ¡û
>C018461 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 3780259 3780174 - Tyr GTA [Ensembl] ¡û
>C018754 CP000352 Betaproteobacteria Cupriavidus metallidurans CH34 [CP000352] 3612507 3612422 - Tyr GTA [Ensembl] ¡û
>WENV180013716 FMSI01139577 [FMSI] soil metagenome; Soil 449 364 - Tyr GTA [ENA] ¢þ
>WENV180249519 OBEQ010204761 [OBEQ] groundwater metagenome; groundwater 530 445 - Tyr GTA [ENA] ¢þ
>WENV180264013 OBEQ011528668 [OBEQ] groundwater metagenome; groundwater 851 936 + Tyr GTA [ENA] ¢þ
>WENV180295744 OBIZ01284139 [OBIZ] soil metagenome; soil 36 121 + Tyr GTA [ENA] ¢þ
>WENV180351425 OBLQ010055700 [OBLQ] soil metagenome; soil 622 537 - Tyr GTA [ENA] ¢þ
>WENV180355348 OBNH01004037 [OBNH] sediment metagenome; sediment 294 379 + Tyr GTA [ENA] ¢þ
>WENV181164670 OEIR01290665 [OEIR] soil metagenome; soil 100 185 + Tyr GTA [ENA] ¢þ
>WENV181187889 OEOE01001274 [OEOE] activated sludge metagenome; Activated Sludge 1969 2054 + Tyr GTA [ENA] ¢þ
>WENV181223034 OFDC01001333 [OFDC] hot springs metagenome; Water 12942 13027 + Tyr GTA [ENA] ¢þ
>WENV181227260 OFDN01004425 [OFDN] hot springs metagenome; Water 6002 6087 + Tyr GTA [ENA] ¢þ
>WENV181378672 OFRB01047412 [OFRB] wastewater metagenome; Exp Tend CN 0WW 303 218 - Tyr GTA [ENA] ¢þ
>WENV181391934 OFRV01000626 [OFRV] freshwater metagenome; Freshwater Lake 2322 2237 - Tyr GTA [ENA] ¢þ
>C08008204 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 3780259 3780177 - Tyr GTA [Ensembl] ¡û
>W141214268 AZSN01000356 Betaproteobacteria Methylibium sp. T29-B [AZSN] 705 790 + Tyr GTA [ENA] ¡û
>W141223630 BADL01000074 Betaproteobacteria Ideonella sp. B508-1 [BADL] 4921 5006 + Tyr GTA [ENA] ¡û
>W141234432 BAWN01000048 Betaproteobacteria Serpentinimonas barnesii H1 [BAWN] 459 374 - Tyr GTA [ENA] ¡û
>W141260614 CCAE010000006 Betaproteobacteria Hydrogenophaga intermedia [CCAE] 144990 144905 - Tyr GTA [ENA] ¡û
>W141276702 JADZ01000039 Betaproteobacteria Curvibacter gracilis ATCC BAA-807 [JADZ] 923 838 - Tyr GTA [ENA] ¡û
>C08005943 CP001013 Betaproteobacteria Leptothrix cholodnii SP-6 [CP001013] 4348419 4348337 - Tyr GTA [Ensembl] ¡û
>WENV183674588 ORJL011407129 [ORJL] groundwater metagenome; groundwater 365 280 - Tyr GTA [ENA] ¢þ
>WENV183703689 PDVJ01035491 [PDVJ] alkali sediment metagenome; glacial lake sediment 296 381 + Tyr GTA [ENA] ¢þ
>WENV170019950 BBPE01001759 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 169 84 - Tyr GTA [ENA] ¢þ
>WENV170020088 BBPE01002819 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 412 327 - Tyr GTA [ENA] ¢þ
>WENV170639650 JFJP01005635 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 488 403 - Tyr GTA [ENA] ¢þ
>WENV170639864 JFJP01010519 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 10513 10598 + Tyr GTA [ENA] ¢þ
>WENV170651162 JRYF01001643 [JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 1059 1144 + Tyr GTA [ENA] ¢þ
>WENV170658749 JUEG02000045 [JUEG] rock porewater metagenome; Opalinus Clay rock BIC-A1 borehole 602 517 - Tyr GTA [ENA] ¢þ
>WENV170660782 JXWU01029459 [JXWU] soil metagenome; rice field; organic control Plot 421 336 - Tyr GTA [ENA] ¢þ
>WENV170965671 MTEU01005808 [MTEU] soil metagenome; naturally attenuated soil 109 194 + Tyr GTA [ENA] ¢þ
>W09100047 AAAI03000011 Betaproteobacteria Cupriavidus metallidurans CH34 [AAAI] 179651 179566 - Tyr GTA [ENA] ¡û
>W09101377 AAEM01000002 Betaproteobacteria Methylibium petroleiphilum PM1 [AAEM] 26881 26966 + Tyr GTA [ENA] ¡û
>W141485146 JFZD01000214 Betaproteobacteria Cupriavidus metallidurans [JFZD] 413 328 - Tyr GTA [ENA] ¡û
>W141485153 JFZE01000027 Betaproteobacteria Cupriavidus metallidurans [JFZE] 363 278 - Tyr GTA [ENA] ¡û
>C181064515 CP022423 Betaproteobacteria Vitreoscilla filiformis ATCC 15551 [CP022423] 841804 841889 + Tyr GTA - ¡û
>C181134485 CP026544 Betaproteobacteria Cupriavidus metallidurans Ni-2 [CP026544] 6228966 6228881 - Tyr GTA - ¡û
>C181176174 CP029210 Betaproteobacteria Aquabacterium olei NBRC 110486 [CP029210] 191092 191177 + Tyr GTA - ¡û
>C191154527 CP037900 Betaproteobacteria Cupriavidus metallidurans BS1 [CP037900, CP037901] 3625115 3625030 - Tyr GTA - ¡û
>C191164575 CP039287 Betaproteobacteria Cupriavidus necator H16 [CP039287, CP039288] 3778195 3778110 - Tyr GTA - ¡û
>W141727683 JNFG01000036 Betaproteobacteria Caballeronia sordidicola [JNFG] 66041 65956 - Tyr GTA [ENA] ¡û
>W1910175613 BJCL01000021 Betaproteobacteria Rubrivivax pictus W35 [BJCL] 63378 63293 - Tyr GTA [ENA] ¡û
>W1910501695 FYAR01000017 Betaproteobacteria Cupriavidus metallidurans NDB2Meth2 [FYAR] 294958 294873 - Tyr GTA [ENA] ¡û
>W1910699917 MESA01000027 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA] 112994 113079 + Tyr GTA [ENA] ¡û
>W1910700355 MESK01000112 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK] 113043 113128 + Tyr GTA [ENA] ¡û
>W1910804556 MTHB01000141 Betaproteobacteria Caballeronia sordidicola PAMC 26633 [MTHB] 431 516 + Tyr GTA [ENA] ¡û
>W1911518404 OFSS01000010 Betaproteobacteria Cupriavidus taiwanensis [OFSS] 104736 104651 - Tyr GTA [ENA] ¡û
>W1911518728 OFSZ01000007 Betaproteobacteria Cupriavidus taiwanensis [OFSZ] 26825 26740 - Tyr GTA [ENA] ¡û
>W1911519242 OFTI01000021 Betaproteobacteria Cupriavidus taiwanensis [OFTI] 20078 19993 - Tyr GTA [ENA] ¡û
>W1911519463 OFTM01000017 Betaproteobacteria Cupriavidus taiwanensis [OFTM] 129596 129511 - Tyr GTA [ENA] ¡û
>W1911701451 QNUI01000142 Betaproteobacteria Azohydromonas sediminis YIM 73032 [QNUI] 6919 7004 + Tyr GTA [ENA] ¡û
>W1911768559 QXGR01000016 Betaproteobacteria Simplicispira lacusdiani CPCC 100842 [QXGR] 26449 26534 + Tyr GTA [ENA] ¡û
>W1810017361 BGPQ01000111 Betaproteobacteria Cupriavidus sp. P-10 [BGPQ] 498 413 - Tyr GTA [ENA] ¡û
>W1810194586 PKPC01000041 Betaproteobacteria Ralstonia insidiosa WCHRI065162 [PKPC] 357 272 - Tyr GTA [ENA] ¡û
>W1810273289 PSNX01000016 Betaproteobacteria Caldimonas caldifontis BCRC 80649 [PSNX] 506 421 - Tyr GTA [ENA] ¡û
>W1810537710 QDFJ01000112 Betaproteobacteria Cupriavidus metallidurans BS1 [QDFJ] 263 348 + Tyr GTA [ENA] ¡û
>W1810573259 QEKP01000017 Betaproteobacteria Cupriavidus alkaliphilus CAG-122 [QEKP] 131989 131904 - Tyr GTA [ENA] ¡û
>W1810596776 QGGT01000007 Betaproteobacteria Cupriavidus plantarum SLV-132 [QGGT] 416 501 + Tyr GTA [ENA] ¡û
>W1810666678 QJOU01000117 Betaproteobacteria Piscinibacter caeni MQ-18 [QJOU] 412 327 - Tyr GTA [ENA] ¡û
>W1810685784 QKZN01000013 Betaproteobacteria Cupriavidus alkaliphilus MLR2-44 [QKZN] 575 660 + Tyr GTA [ENA] ¡û
>W1810884639 QUMT01000003 Betaproteobacteria Roseateles depolymerans DSM 11813 [QUMT] 708891 708806 - Tyr GTA [ENA] ¡û
>W1810912346 QVLS01000006 Betaproteobacteria Hydrogenophaga borbori LA-38 [QVLS] 463 378 - Tyr GTA [ENA] ¡û
>C151002101 AP014568 Betaproteobacteria Serpentinimonas raichei A1 [AP014568] 2185053 2184968 - Tyr GTA [Ensembl] ¡û
>C151002145 AP014569 Betaproteobacteria Serpentinimonas maccroryi B1 [AP014569] 2221148 2221063 - Tyr GTA [Ensembl] ¡û
>WENV029380 AACY021194085 Marine microbial communities from Global Ocean Sampling (GOS) 729 644 - Tyr GTA [ENA]
>C151081684 CP011371 Betaproteobacteria Caldimonas brevitalea DSM 7029 [CP011371] 5762075 5761990 - Tyr GTA [Ensembl] ¡û
>ENV09000437 ABSN01069149 Freshwater sediment metagenome lwFormaldehyde_C1 356 271 - Tyr GTA [ENA] ¡û
>ENV09000470 ABSO01002335 Freshwater sediment metagenome lwFormate_C1 3366 3451 + Tyr GTA [ENA] ¡û
>ENV09001399 ABSR01005039 Freshwater sediment metagenome lwMethylamine_C1 592 677 + Tyr GTA [ENA] ¡û
>W1510015119 BBQN01000225 Betaproteobacteria Cupriavidus pauculus KF709 [BBQN] 362 277 - Tyr GTA [ENA] ¡û
>W1510021351 BBYR01000033 Betaproteobacteria Piscinibacter sakaiensis 201-F6 [BBYR] 92226 92311 + Tyr GTA [ENA] ¡û
>C11105763 CP002877 Betaproteobacteria Cupriavidus necator N-1 [CP002877, CP002878] 3594936 3594851 - Tyr GTA [Ensembl] ¡û
>W1510766062 JANU01000004 Betaproteobacteria Caenimonas sp. SL110 [JANU] 175363 175448 + Tyr GTA [ENA] ¡û
>C11118985 CP000245 Betaproteobacteria Ramlibacter tataouinensis TTB310 [CP000245] 3818952 3818867 - Tyr GTA [Ensembl] ¡û
>W1511433166 JUGZ01000042 Betaproteobacteria Methylibium sp. CF468 [JUGZ] 780 695 - Tyr GTA [ENA] ¡û
>W1511449678 JVBI01000178 Betaproteobacteria Ralstonia solanacearum 58_RSOL [JVBI] 1567 1482 - Tyr GTA [ENA] ¡û
>W1511552109 JZUE01000009 Betaproteobacteria Aquincola tertiaricarbonis MIMtkpLc11 [JZUE] 252377 252462 + Tyr GTA [ENA] ¡û
>C121001082 AP012320 Betaproteobacteria Rubrivivax gelatinosus IL144 [AP012320] 330419 330504 + Tyr GTA [Ensembl] ¡û
>C161078286 CP014844 Betaproteobacteria Cupriavidus nantongensis X1 [CP014844, CP014845] 4613906 4613821 - Tyr GTA [Ensembl] ¡û
>W121036326 AHLZ01000001 Betaproteobacteria Burkholderiales bacterium JOSHI_001 [AHLZ] 378362 378447 + Tyr GTA [ENA] ¡û
>W121060081 AJFF01000039 Betaproteobacteria Rubrivivax gelatinosus CBS [AJFF] 436 351 - Tyr GTA [ENA] ¡û
>W121070139 AJWL01000134 Betaproteobacteria Hydrogenophaga sp. PBC [AJWL] 386 301 - Tyr GTA [ENA] ¡û
>W1610070235 BCTC01000015 Betaproteobacteria Azohydromonas lata NBRC 102462 [BCTC] 92375 92460 + Tyr GTA [ENA] ¡û
>W1610074334 BCWO01000061 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 249 334 + Tyr GTA [ENA] ¡û
>W1610206822 FCOK02000237 Betaproteobacteria Caballeronia udeis [FCOK] 426 341 - Tyr GTA [ENA] ¡û
>W1610649151 LJHT01000111 Betaproteobacteria beta proteobacterium AAP51 [LJHT] 53656 53741 + Tyr GTA [ENA] ¡û
>W1610740179 LMQL01000008 Betaproteobacteria Ramlibacter sp. Leaf400 [LMQL] 550 465 - Tyr GTA [ENA] ¡û
>W1610753716 LNET01000108 Betaproteobacteria Burkholderiales bacterium Ga0077543 [LNET] 641 556 - Tyr GTA [ENA] ¡û
>W1710067608 BCTC01000015 Betaproteobacteria Azohydromonas lata NBRC 102462 [BCTC] 92375 92460 + Tyr GTA [ENA] ¡û
>W1710071452 BCWO01000061 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 249 334 + Tyr GTA [ENA] ¡û
>W1710207572 FCOK02000237 Betaproteobacteria Caballeronia udeis [FCOK] 426 341 - Tyr GTA [ENA] ¡û
>W1710544479 FOAV01000010 Betaproteobacteria Roseateles sp. YR242 [FOAV] 108960 108875 - Tyr GTA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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