This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.11157 (36 seq.)
>WENV180206925
OBAI01001672
[OBAI] human gut metagenome; human gut
14971
14879
-
Ser
TGA
[ENA]
¡û
>WENV180329347
OBKV01000871
[OBKV] human gut metagenome; human gut
20904
20812
-
Ser
TGA
[ENA]
¡û
>WENV180338853
OBLI01001212
[OBLI] pig gut metagenome; faeces
7550
7642
+
Ser
TGA
[ENA]
¡û
>WENV180539513
OCHP01039099
[OCHP] human gut metagenome; human gut
445
537
+
Ser
TGA
[ENA]
¡û
>WENV180761236
ODHZ01006804
[ODHZ] human metagenome; G_DNA_Stool
5233
5141
-
Ser
TGA
[ENA]
¡û
>WENV181034422
ODXO01000075
[ODXO] human metagenome; G_DNA_Stool
8501
8593
+
Ser
TGA
[ENA]
¡û
>WENV181661535
OGOG01003740
[OGOG] human gut metagenome; faeces
2039
2131
+
Ser
TGA
[ENA]
¡û
>WENV181691923
OGOZ01034644
[OGOZ] human gut metagenome; faeces
1061
969
-
Ser
TGA
[ENA]
¡û
>WENV181894419
OGXR01000076
[OGXR] human gut metagenome; faeces
20305
20213
-
Ser
TGA
[ENA]
¡û
>WENV181929899
OGYP01000002
[OGYP] human gut metagenome; faeces
20397
20489
+
Ser
TGA
[ENA]
¡û
>WENV181951201
OGZH01000081
[OGZH] human gut metagenome; faeces
34078
34170
+
Ser
TGA
[ENA]
¡û
>WENV181954476
OGZK01000007
[OGZK] human gut metagenome; faeces
127514
127422
-
Ser
TGA
[ENA]
¡û
>WENV181979003
OHAF01000164
[OHAF] human gut metagenome; faeces
67007
67099
+
Ser
TGA
[ENA]
¡û
>WENV182011075
OHBM01000010
[OHBM] human gut metagenome; faeces
149754
149662
-
Ser
TGA
[ENA]
¡û
>WENV182608350
OJJV01000088
[OJJV] metagenome; faeces
61770
61678
-
Ser
TGA
[ENA]
¡û
>WENV182716707
OJPK01000004
[OJPK] human gut metagenome; stool sample
172178
172086
-
Ser
TGA
[ENA]
¡û
>WENV182766448
OJRT01011083
[OJRT] human gut metagenome; stool sample
1096
1188
+
Ser
TGA
[ENA]
¡û
>WENV182886242
OKSD01000037
[OKSD] human gut metagenome; faeces
37900
37992
+
Ser
TGA
[ENA]
¡û
>WENV182900654
OKSU01002273
[OKSU] human gut metagenome; feces
2066
1974
-
Ser
TGA
[ENA]
¡û
>WENV182943098
OKVH01023688
[OKVH] human gut metagenome; human gut
925
1017
+
Ser
TGA
[ENA]
¡û
>WENV183096488
OLNE01000026
[OLNE] human gut metagenome; faeces
136283
136375
+
Ser
TGA
[ENA]
¡û
>WENV183127178
OLNZ01000015
[OLNZ] human gut metagenome; faeces
150049
150141
+
Ser
TGA
[ENA]
¡û
>WENV183144971
OLOL01019114
[OLOL] human gut metagenome; faeces
96
188
+
Ser
TGA
[ENA]
¡û
>WENV183158026
OLOT01011895
[OLOT] human gut metagenome; faeces
1653
1561
-
Ser
TGA
[ENA]
¡û
>WENV183158660
OLOU01000059
[OLOU] human gut metagenome; faeces
35752
35844
+
Ser
TGA
[ENA]
¡û
>WENV183175230
OLPF01000088
[OLPF] human gut metagenome; faeces
64172
64080
-
Ser
TGA
[ENA]
¡û
>WENV183176850
OLPG01000010
[OLPG] human gut metagenome; faeces
81504
81596
+
Ser
TGA
[ENA]
¡û
>WENV183184218
OLPN01000004
[OLPN] human gut metagenome; faeces
161977
161885
-
Ser
TGA
[ENA]
¡û
>WENV183195979
OLPU01000050
[OLPU] human gut metagenome; faeces
9023
9115
+
Ser
TGA
[ENA]
¡û
>WENV183238820
OLRA01000015
[OLRA] human gut metagenome; faeces
136175
136083
-
Ser
TGA
[ENA]
¡û
>WENV183262870
OLRQ01012860
[OLRQ] human gut metagenome; faeces
1755
1663
-
Ser
TGA
[ENA]
¡û
>WENV183414383
OMAO01032090
[OMAO] human gut metagenome; feces
603
511
-
Ser
TGA
[ENA]
¡û
>WENV183418588
OMAY01003602
[OMAY] human gut metagenome; feces
4855
4763
-
Ser
TGA
[ENA]
¡û
>WENV170004517
AGTN01706829
[AGTN] bioreactor metagenome; poplar biomass
37
129
+
Ser
TGA
[ENA]
¡û
>WENV170046827
CDYY01053670
[CDYY] gut metagenome; human stools
131852
131944
+
Ser
TGA
[ENA]
¡û
>WENV170055376
CDZF01004262
[CDZF] gut metagenome; human stools
373
281
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK