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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.112334 (16 seq.)
>W1711463333
MJIR01000080
Actinomycetota
Microbacterium sp. AR7-10 [MJIR]
24771
24686
-
Leu
GAG
[ENA]
¡û
>W1711501563
MKRT01000028
Actinomycetota
Microbacterium sp. 69-10 [MKRT]
118123
118208
+
Leu
GAG
[ENA]
¡û
>WENV182551159
OJCB01041395
[OJCB] seawater metagenome; Sea water
610
525
-
Leu
GAG
[ENA]
¡û
>W2010310035
CABWLT010000014
Actinomycetota
Microbacterium sp. 8M [CABWLT]
378385
378470
+
Leu
GAG
[ENA]
¡û
>W2110140990
JAAGOQ010000004
Actinomycetota
Microbacterium resistens Q1654 [JAAGOQ]
30911
30826
-
Leu
GAG
[ENA]
¡û
>W2110259912
JACSPX010000002
Actinomycetota
Microbacterium sp. Re1 [JACSPX]
114894
114979
+
Leu
GAG
[ENA]
¡û
>C231118382
CP069429
Actinomycetota
Microbacterium sp. EF45047 [CP069429]
1435309
1435394
+
Leu
GAG
-
¡û
>C231175759
CP082781
Actinomycetota
Microbacterium resistens MZT7 [CP082781]
845796
845711
-
Leu
GAG
-
¡û
>C231416971
CP099706
Actinomycetota
Microbacterium azadirachtae CNUC13 [CP099706]
1751339
1751254
-
Leu
GAG
-
¡û
>W1511528690
JYIT01000085
Actinomycetota
Microbacterium azadirachtae DSM 23848 [JYIT]
203646
203731
+
Leu
GAG
[ENA]
¡û
>W1610068053
BCRA01000017
Actinomycetota
Microbacterium resistens NBRC 103078 [BCRA]
55906
55991
+
Leu
GAG
[ENA]
¡û
>W1710065426
BCRA01000017
Actinomycetota
Microbacterium resistens NBRC 103078 [BCRA]
55906
55991
+
Leu
GAG
[ENA]
¡û
>W1710521747
FNGQ01000001
Actinomycetota
Microbacterium azadirachtae cl140 [FNGQ]
433630
433545
-
Leu
GAG
[ENA]
¡û
>W1710538396
FNUN01000001
Actinomycetota
Microbacterium azadirachtae cl12a [FNUN]
433360
433275
-
Leu
GAG
[ENA]
¡û
>W1710538560
FNUQ01000001
Actinomycetota
Microbacterium azadirachtae cl152 [FNUQ]
434094
434009
-
Leu
GAG
[ENA]
¡û
>W1710574966
FOYR01000001
Actinomycetota
Microbacterium azadirachtae cl127 [FOYR]
442452
442367
-
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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