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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.112989 (4 seq.)
>w014021
AAOC01000007
Bacteroidota
Maribacter sp. HTCC2170 HTCC2170 [AAOC]
21753
21840
+
Ser
TGA
[ENA]
¡û
>W1810121583
PHUL01000001
Bacteroidota
Algibacter sp. RHA_19 [PHUL]
2705601
2705686
+
Ser
TGA
[ENA]
¡û
>C10106847
CP002157
Bacteroidota
Maribacter sp. HTCC2170 [CP002157]
3105159
3105246
+
Ser
TGA
[Ensembl]
¡û
>W1710579952
FPIY01000001
Bacteroidota
Cellulophaga fucicola [FPIY]
767745
767660
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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