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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.113161 (12 seq.)
>W1910703705
MFBB01000015
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44 [MFBB]
89412
89497
+
Leu
CAA
[ENA]
¡û
>W1910703851
MFBG01000007
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_42_58 [MFBG]
83786
83871
+
Leu
CAA
[ENA]
¡û
>W1910704005
MFBM01000004
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_42_33 [MFBM]
83796
83881
+
Leu
CAA
[ENA]
¡û
>W1910704201
MFBT01000005
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_42_50 [MFBT]
84481
84566
+
Leu
CAA
[ENA]
¡û
>W1910704388
MFBX01000034
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_FULL_42_37 [MFBX]
15272
15187
-
Leu
CAA
[ENA]
¡û
>W1910704465
MFBZ01000029
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_12_FULL_41_16 [MFBZ]
81066
81151
+
Leu
CAA
[ENA]
¡û
>W2010837131
MFBB01000015
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44 [MFBB]
89412
89497
+
Leu
CAA
[ENA]
¡û
>W2010837277
MFBG01000007
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_42_58 [MFBG]
83786
83871
+
Leu
CAA
[ENA]
¡û
>W2010837431
MFBM01000004
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_42_33 [MFBM]
83796
83881
+
Leu
CAA
[ENA]
¡û
>W2010837627
MFBT01000005
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_42_50 [MFBT]
84481
84566
+
Leu
CAA
[ENA]
¡û
>W2010837814
MFBX01000034
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_FULL_42_37 [MFBX]
15272
15187
-
Leu
CAA
[ENA]
¡û
>W2010837891
MFBZ01000029
Unclassified
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_12_FULL_41_16 [MFBZ]
81066
81151
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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