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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.113228 (11 seq.)
>W1711406699
MGFW01000007
Unclassified
Candidatus Woesebacteria bacterium RBG_16_41_13 [MGFW]
57860
57773
-
Tyr
GTA
[ENA]
¡û
>W1910722250
MGGN01000003
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_42_80 [MGGN]
6564
6651
+
Tyr
GTA
[ENA]
¡û
>W1910722470
MGGS01000016
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_02_FULL_42_20 [MGGS]
57228
57141
-
Tyr
GTA
[ENA]
¡û
>W1910722596
MGGW01000002
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_41_24 [MGGW]
49446
49359
-
Tyr
GTA
[ENA]
¡û
>W1910723078
MGHJ01000032
Unclassified
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_42_67 [MGHJ]
7785
7872
+
Tyr
GTA
[ENA]
¡û
>W1910723259
MGHN01000031
Unclassified
Candidatus Woesebacteria bacterium RIFCSPLOWO2_02_FULL_42_10 [MGHN]
7510
7597
+
Tyr
GTA
[ENA]
¡û
>W2010855677
MGGN01000003
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_42_80 [MGGN]
6564
6651
+
Tyr
GTA
[ENA]
¡û
>W2010855897
MGGS01000016
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_02_FULL_42_20 [MGGS]
57228
57141
-
Tyr
GTA
[ENA]
¡û
>W2010856023
MGGW01000002
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_41_24 [MGGW]
49446
49359
-
Tyr
GTA
[ENA]
¡û
>W2010856505
MGHJ01000032
Unclassified
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_42_67 [MGHJ]
7785
7872
+
Tyr
GTA
[ENA]
¡û
>W2010856686
MGHN01000031
Unclassified
Candidatus Woesebacteria bacterium RIFCSPLOWO2_02_FULL_42_10 [MGHN]
7510
7597
+
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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