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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.113872 (8 seq.)
>W1910708784
MFJI01000010
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15 [MFJI]
50675
50591
-
Ser
TGA
[ENA]
¡û
>W1910709153
MFJT01000027
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_42_10 [MFJT]
11488
11404
-
Ser
TGA
[ENA]
¡û
>W2010842210
MFJI01000010
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15 [MFJI]
50675
50591
-
Ser
TGA
[ENA]
¡û
>W2010842579
MFJT01000027
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_42_10 [MFJT]
11488
11404
-
Ser
TGA
[ENA]
¡û
>W1511607631
LCCY01000005
Unclassified
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_42_16 bacterium GW2011_GWA2_42_16 [LCCY]
36651
36735
+
Ser
TGA
[ENA]
¡û
>W1511608053
LCDL01000011
Unclassified
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_42_26 bacterium GW2011_GWA1_42_26 [LCDL]
6380
6296
-
Ser
TGA
[ENA]
¡û
>W1511609117
LCEX01000007
Unclassified
Candidatus Gottesmanbacteria bacterium GW2011_GWC1_43_10 bacterium GW2011_GWC1_43_10 [LCEX]
36681
36765
+
Ser
TGA
[ENA]
¡û
>W1511609312
LCFD01000006
Unclassified
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_43_11 bacterium GW2011_GWB1_43_11 [LCFD]
36776
36860
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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