This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.114383 (4 seq.)
>W2010579561
JAAXMS010000007
Planctomycetota
Rhodopirellula sp. JC647 [JAAXMS]
310517
310432
-
Leu
CAG
[ENA]
¡û
>W2011610361
SJPL01000001
Planctomycetota
Planctomycetes bacterium Pan14r [SJPL]
5890928
5891013
+
Leu
CAG
[ENA]
¡û
>W2011610507
SJPN01000004
Planctomycetota
Planctomycetes bacterium Pla52n [SJPN]
602857
602942
+
Leu
CAG
[ENA]
¡û
>W2011611204
SJPZ01000002
Planctomycetota
Planctomycetes bacterium V7 [SJPZ]
1714297
1714382
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK