This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.114440 (90 seq.)
>W131238403
BAHT02000226
Bacillota
Clostridiales bacterium VE202-06 [BAHT]
9580
9498
-
Leu
TAG
[ENA]
¡û
>W1712036114
NFHH01000006
Bacillota
Blautia sp. An81 [NFHH]
41373
41291
-
Leu
TAG
[ENA]
¡û
>W1712036325
NFHL01000002
Bacillota
Lachnoclostridium sp. An76 [NFHL]
252068
251988
-
Leu
TAG
[ENA]
¡û
>W1712039141
NFJL01000018
Bacillota
Blautia sp. An249 [NFJL]
65616
65534
-
Leu
TAG
[ENA]
¡û
>WENV180218847
OBAR01210108
[OBAR] human gut metagenome; human gut
187
107
-
Leu
TAG
[ENA]
¢þ
>WENV180306320
OBJP01000319
[OBJP] human gut metagenome; human gut
976
894
-
Leu
TAG
[ENA]
¢þ
>WENV180307656
OBJQ01001112
[OBJQ] human gut metagenome; human gut
15201
15119
-
Leu
TAG
[ENA]
¢þ
>WENV180458128
OBXV01001055
[OBXV] human gut metagenome; faeces
8211
8129
-
Leu
TAG
[ENA]
¢þ
>WENV181057036
ODYJ01117736
[ODYJ] human metagenome; G_DNA_Stool
120
40
-
Leu
TAG
[ENA]
¢þ
>WENV181195030
OEQS01000266
[OEQS] metagenome; Caecal content
4051
3971
-
Leu
TAG
[ENA]
¢þ
>WENV181196183
OEQW01006579
[OEQW] metagenome; Caecal content
343
261
-
Leu
TAG
[ENA]
¢þ
>WENV181197582
OERB01009803
[OERB] metagenome; Caecal content
480
398
-
Leu
TAG
[ENA]
¢þ
>WENV181202471
OERR01009708
[OERR] metagenome; Caecal content
283
365
+
Leu
TAG
[ENA]
¢þ
>WENV181202706
OERS01000910
[OERS] metagenome; Caecal content
96
178
+
Leu
TAG
[ENA]
¢þ
>WENV181204011
OERX01016226
[OERX] metagenome; Caecal content
562
482
-
Leu
TAG
[ENA]
¢þ
>WENV181205543
OESB01004226
[OESB] metagenome; Caecal content
347
264
-
Leu
TAG
[ENA]
¢þ
>WENV181271397
OFGF01029432
[OFGF] mouse gut metagenome; faeces
890
973
+
Leu
TAG
[ENA]
¢þ
>WENV181338904
OFMF01044162
[OFMF] human gut metagenome; human gut
107
189
+
Leu
TAG
[ENA]
¢þ
>WENV181343695
OFMJ01006918
[OFMJ] human gut metagenome; human gut
3749
3667
-
Leu
TAG
[ENA]
¢þ
>WENV181420941
OGCN01009021
[OGCN] human gut metagenome; human gut
135
216
+
Leu
TAG
[ENA]
¢þ
>WENV181441542
OGDN01009488
[OGDN] human gut metagenome; human gut
2132
2212
+
Leu
TAG
[ENA]
¢þ
>WENV181652452
OGNW01017514
[OGNW] metagenome; Human gut stool
78
160
+
Leu
TAG
[ENA]
¢þ
>WENV181752128
OGQQ01001611
[OGQQ] human gut metagenome; faeces
133
214
+
Leu
TAG
[ENA]
¢þ
>WENV181782263
OGRK01006764
[OGRK] human gut metagenome; faeces
4042
3962
-
Leu
TAG
[ENA]
¢þ
>WENV181887140
OGXL01001347
[OGXL] human gut metagenome; faeces
116
198
+
Leu
TAG
[ENA]
¢þ
>WENV181890018
OGXN01003201
[OGXN] human gut metagenome; faeces
46
128
+
Leu
TAG
[ENA]
¢þ
>WENV181892937
OGXP01026288
[OGXP] human gut metagenome; faeces
586
504
-
Leu
TAG
[ENA]
¢þ
>WENV181917361
OGYG01010096
[OGYG] human gut metagenome; faeces
1868
1786
-
Leu
TAG
[ENA]
¢þ
>WENV181965902
OGZT01006918
[OGZT] human gut metagenome; faeces
2573
2491
-
Leu
TAG
[ENA]
¢þ
>WENV182013891
OHBO01029258
[OHBO] human gut metagenome; feces
398
478
+
Leu
TAG
[ENA]
¢þ
>WENV182016559
OHBU01032546
[OHBU] human gut metagenome; feces
13
93
+
Leu
TAG
[ENA]
¢þ
>WENV182124092
OHJQ01001931
[OHJQ] human gut metagenome; feces
117
199
+
Leu
TAG
[ENA]
¢þ
>WENV182227616
OHRG01001977
[OHRG] human gut metagenome; feces
107
189
+
Leu
TAG
[ENA]
¢þ
>WENV182436242
OIJF01006992
[OIJF] human gut metagenome; human gut
331
250
-
Leu
TAG
[ENA]
¢þ
>WENV182458931
OINJ01012844
[OINJ] human gut metagenome; human gut
128
208
+
Leu
TAG
[ENA]
¢þ
>WENV182516162
OIWN01015298
[OIWN] human gut metagenome; faeces
1884
1804
-
Leu
TAG
[ENA]
¢þ
>WENV182678532
OJNS01011261
[OJNS] human gut metagenome; human gut
2201
2120
-
Leu
TAG
[ENA]
¢þ
>WENV182701251
OJOP01007175
[OJOP] human gut metagenome; human gut
2830
2749
-
Leu
TAG
[ENA]
¢þ
>WENV182740090
OJQL01002778
[OJQL] human gut metagenome; stool sample
39
119
+
Leu
TAG
[ENA]
¢þ
>WENV182890362
OKSF01024478
[OKSF] human gut metagenome; faeces
111
193
+
Leu
TAG
[ENA]
¢þ
>WENV182907900
OKTF01001912
[OKTF] human gut metagenome; feces
107
189
+
Leu
TAG
[ENA]
¢þ
>WENV183018351
OLEY01006093
[OLEY] human gut metagenome; human gut
111
193
+
Leu
TAG
[ENA]
¢þ
>WENV183064564
OLIH01016062
[OLIH] metagenome; faeces
7
89
+
Leu
TAG
[ENA]
¢þ
>WENV183097845
OLNE01015656
[OLNE] human gut metagenome; faeces
54
134
+
Leu
TAG
[ENA]
¢þ
>WENV183105963
OLNL01001061
[OLNL] human gut metagenome; faeces
27392
27311
-
Leu
TAG
[ENA]
¢þ
>WENV183128654
OLNZ01014423
[OLNZ] human gut metagenome; faeces
40
121
+
Leu
TAG
[ENA]
¢þ
>WENV183134991
OLOD01010597
[OLOD] human gut metagenome; faeces
1990
1909
-
Leu
TAG
[ENA]
¢þ
>WENV183168529
OLOZ01034906
[OLOZ] human gut metagenome; faeces
77
157
+
Leu
TAG
[ENA]
¢þ
>WENV183170085
OLPA01031027
[OLPA] human gut metagenome; faeces
21
101
+
Leu
TAG
[ENA]
¢þ
>WENV183174485
OLPE01001567
[OLPE] human gut metagenome; faeces
137
220
+
Leu
TAG
[ENA]
¢þ
>WENV183187774
OLPO01072653
[OLPO] human gut metagenome; faeces
147
228
+
Leu
TAG
[ENA]
¢þ
>WENV183190739
OLPR01001569
[OLPR] human gut metagenome; faeces
18351
18269
-
Leu
TAG
[ENA]
¢þ
>WENV183195412
OLPT01006730
[OLPT] human gut metagenome; faeces
4034
3952
-
Leu
TAG
[ENA]
¢þ
>WENV183196943
OLPU01007734
[OLPU] human gut metagenome; faeces
4903
4822
-
Leu
TAG
[ENA]
¢þ
>WENV183198800
OLPV01005065
[OLPV] human gut metagenome; faeces
6871
6790
-
Leu
TAG
[ENA]
¢þ
>WENV183203771
OLPY01003486
[OLPY] human gut metagenome; faeces
133
214
+
Leu
TAG
[ENA]
¢þ
>WENV183205677
OLPZ01027362
[OLPZ] human gut metagenome; faeces
141
222
+
Leu
TAG
[ENA]
¢þ
>WENV183216831
OLQH01011193
[OLQH] human gut metagenome; faeces
52
134
+
Leu
TAG
[ENA]
¢þ
>WENV183234171
OLQV01014194
[OLQV] human gut metagenome; faeces
188
269
+
Leu
TAG
[ENA]
¢þ
>WENV183241578
OLRB01000157
[OLRB] human gut metagenome; faeces
111
193
+
Leu
TAG
[ENA]
¢þ
>WENV183249209
OLRG01001439
[OLRG] human gut metagenome; faeces
110
191
+
Leu
TAG
[ENA]
¢þ
>WENV183254487
OLRJ01003674
[OLRJ] human gut metagenome; faeces
188
269
+
Leu
TAG
[ENA]
¢þ
>WENV183256898
OLRL01000867
[OLRL] human gut metagenome; faeces
111
193
+
Leu
TAG
[ENA]
¢þ
>WENV183280344
OLSB01003534
[OLSB] human gut metagenome; faeces
2257
2338
+
Leu
TAG
[ENA]
¢þ
>WENV183500410
OMGQ01011193
[OMGQ] human gut metagenome; human gut
2316
2232
-
Leu
TAG
[ENA]
¢þ
>WENV183500563
OMGQ01030998
[OMGQ] human gut metagenome; human gut
686
604
-
Leu
TAG
[ENA]
¢þ
>WENV183520430
OMNT01015448
[OMNT] human gut metagenome; faeces
195
276
+
Leu
TAG
[ENA]
¢þ
>WENV183520655
OMNT01038508
[OMNT] human gut metagenome; faeces
391
311
-
Leu
TAG
[ENA]
¢þ
>WENV183772877
PPYF01024540
[PPYF] human gut metagenome; stool from patient with Crohn's disease
230748
230830
+
Leu
TAG
[ENA]
¢þ
>WENV183777162
PPYF01102435
[PPYF] human gut metagenome; stool from patient with Crohn's disease
47128
47210
+
Leu
TAG
[ENA]
¢þ
>WENV183778242
PPYF01116302
[PPYF] human gut metagenome; stool from patient with Crohn's disease
7288
7206
-
Leu
TAG
[ENA]
¢þ
>WENV183780389
PPYF01171658
[PPYF] human gut metagenome; stool from patient with Crohn's disease
94828
94744
-
Leu
TAG
[ENA]
¢þ
>WENV183784480
PPYF01266415
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1001
919
-
Leu
TAG
[ENA]
¢þ
>WENV183792096
PPYF01450737
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1055
973
-
Leu
TAG
[ENA]
¢þ
>WENV170637373
JFBN01319426
[JFBN] chicken gut metagenome; ceca of Broiler chicken
1794
1714
-
Leu
TAG
[ENA]
¢þ
>C181064419
CP022413
Bacillota
Blautia hansenii DSM 20583 [CP022413]
379312
379394
+
Leu
TAG
-
¡û
>C181191262
CP030280
Bacillota
Blautia argi KCTC 15426 [CP030280]
2839164
2839244
+
Leu
TAG
-
¡û
>C191178224
CP040506
Bacillota
Hungatella hathewayi WAL-18680 [CP040506]
4533171
4533251
+
Leu
TAG
-
¡û
>W09113640
ABYU02000011
Bacillota
Blautia hansenii DSM 20583 [ABYU]
61529
61447
-
Leu
TAG
[ENA]
¡û
>W1911742800
QVHE01000004
Bacillota
Lachnospiraceae bacterium AM25-40 [QVHE]
157789
157707
-
Leu
TAG
[ENA]
¡û
>W1911742838
QVHF01000004
Bacillota
Lachnospiraceae bacterium AM25-39 [QVHF]
56813
56895
+
Leu
TAG
[ENA]
¡û
>W1810821443
QSFL01000005
Bacillota
Blautia obeum AM43-41 [QSFL]
85357
85276
-
Leu
TAG
[ENA]
¡û
>W1810826478
QSIZ01000001
Bacillota
Blautia obeum AM32-10AC [QSIZ]
135295
135214
-
Leu
TAG
[ENA]
¡û
>W1810828206
QSKF01000005
Bacillota
Blautia obeum AM28-23 [QSKF]
161249
161329
+
Leu
TAG
[ENA]
¡û
>W1810906768
QVGF01000004
Bacillota
Lachnospiraceae bacterium AM25-22 [QVGF]
157789
157707
-
Leu
TAG
[ENA]
¡û
>W1810906910
QVGI01000004
Bacillota
Lachnospiraceae bacterium AM25-11LB [QVGI]
161758
161676
-
Leu
TAG
[ENA]
¡û
>W11105894
ACTV01000022
Bacillota
Lachnospiraceae bacterium 6_1_63FAA [ACTV]
64957
64875
-
Leu
TAG
[ENA]
¡û
>C161087336
CP015405
Bacillota
Blautia pseudococcoides YL58 [CP015405]
5030663
5030746
+
Leu
TAG
[Ensembl]
¡û
>C161103960
FP929054
Bacillota
Blautia obeum A2-162 [FP929054]
3385357
3385274
-
Leu
TAG
-
¡û
>W121001654
ADLN01000008
Bacillota
Hungatella hathewayi WAL-18680 [ADLN]
30794
30874
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK