This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.115931 (6 seq.)
>WENV180247238
OBEQ010008790
[OBEQ] groundwater metagenome; groundwater
729
647
-
Leu
TAG
[ENA]
¡û
>W1910708808
MFJJ01000001
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_46_14 [MFJJ]
10991
10907
-
Leu
TAG
[ENA]
¡û
>W1910709254
MFJW01000006
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_46_21 [MFJW]
15224
15140
-
Leu
TAG
[ENA]
¡û
>W2010842234
MFJJ01000001
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_46_14 [MFJJ]
10991
10907
-
Leu
TAG
[ENA]
¡û
>W2010842680
MFJW01000006
Unclassified
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_46_21 [MFJW]
15224
15140
-
Leu
TAG
[ENA]
¡û
>W1511605456
LCAG01000014
Unclassified
Candidatus Curtissbacteria bacterium GW2011_GWA1_41_11 bacterium GW2011_GWA1_41_11 [LCAG]
11147
11063
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK