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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.117923 (200 seq.)
>W1710906989
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
9698
9782
+
Leu
CAG
[ENA]
¡û
>W1710906990
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
24482
24566
+
Leu
CAG
[ENA]
¡û
>W1710906991
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
22238
22154
-
Leu
CAG
[ENA]
¡û
>W1710995912
LQAS01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
2307
2391
+
Leu
CAG
[ENA]
¡û
>W1710995922
LQAS01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
3949
3865
-
Leu
CAG
[ENA]
¡û
>W1711135921
LUZQ01000008
Betaproteobacteria
Burkholderiales bacterium Beta_01 [LUZQ]
39367
39283
-
Leu
CAG
[ENA]
¡û
>W1711224651
LXUF01000001
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
1442318
1442402
+
Leu
CAG
[ENA]
¡û
>W1711710486
MSZN01000003
Betaproteobacteria
Alcaligenes faecalis [MSZN]
189129
189213
+
Leu
CAG
[ENA]
¡û
>W1711710488
MSZN01000003
Betaproteobacteria
Alcaligenes faecalis [MSZN]
197796
197712
-
Leu
CAG
[ENA]
¡û
>W1711710489
MSZN01000003
Betaproteobacteria
Alcaligenes faecalis [MSZN]
186887
186803
-
Leu
CAG
[ENA]
¡û
>W1711710538
MSZO01000003
Betaproteobacteria
Alcaligenes faecalis [MSZO]
143315
143399
+
Leu
CAG
[ENA]
¡û
>W1711710539
MSZO01000003
Betaproteobacteria
Alcaligenes faecalis [MSZO]
154224
154308
+
Leu
CAG
[ENA]
¡û
>W1711710540
MSZO01000003
Betaproteobacteria
Alcaligenes faecalis [MSZO]
151982
151898
-
Leu
CAG
[ENA]
¡û
>W1711710581
MSZP01000001
Betaproteobacteria
Alcaligenes faecalis [MSZP]
194289
194373
+
Leu
CAG
[ENA]
¡û
>W1711710587
MSZP01000001
Betaproteobacteria
Alcaligenes faecalis [MSZP]
202800
202716
-
Leu
CAG
[ENA]
¡û
>W1711710588
MSZP01000001
Betaproteobacteria
Alcaligenes faecalis [MSZP]
192047
191963
-
Leu
CAG
[ENA]
¡û
>W1711710653
MSZQ01000006
Betaproteobacteria
Alcaligenes faecalis [MSZQ]
175335
175419
+
Leu
CAG
[ENA]
¡û
>W1711710654
MSZQ01000006
Betaproteobacteria
Alcaligenes faecalis [MSZQ]
183846
183762
-
Leu
CAG
[ENA]
¡û
>W1711710655
MSZQ01000006
Betaproteobacteria
Alcaligenes faecalis [MSZQ]
173093
173009
-
Leu
CAG
[ENA]
¡û
>W1711710720
MSZR01000017
Betaproteobacteria
Alcaligenes faecalis [MSZR]
98679
98763
+
Leu
CAG
[ENA]
¡û
>W1711710721
MSZR01000017
Betaproteobacteria
Alcaligenes faecalis [MSZR]
107190
107106
-
Leu
CAG
[ENA]
¡û
>W1711710722
MSZR01000017
Betaproteobacteria
Alcaligenes faecalis [MSZR]
96437
96353
-
Leu
CAG
[ENA]
¡û
>W1711711864
MTBI01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [MTBI]
714070
714154
+
Leu
CAG
[ENA]
¡û
>W1711711874
MTBI01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [MTBI]
718985
718901
-
Leu
CAG
[ENA]
¡û
>W1711711875
MTBI01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [MTBI]
711826
711742
-
Leu
CAG
[ENA]
¡û
>C171115506
CP021079
Betaproteobacteria
Alcaligenes faecalis P156 [CP021079]
2342594
2342678
+
Leu
CAG
-
¡û
>C171115507
CP021079
Betaproteobacteria
Alcaligenes faecalis P156 [CP021079]
2353502
2353586
+
Leu
CAG
-
¡û
>C171115527
CP021079
Betaproteobacteria
Alcaligenes faecalis P156 [CP021079]
2351260
2351176
-
Leu
CAG
-
¡û
>W131051770
AMXV01000024
Betaproteobacteria
Alcaligenes sp. HPC1271 [AMXV]
30164
30248
+
Leu
CAG
[ENA]
¡û
>W131051771
AMXV01000024
Betaproteobacteria
Alcaligenes sp. HPC1271 [AMXV]
35220
35136
-
Leu
CAG
[ENA]
¡û
>W131051772
AMXV01000024
Betaproteobacteria
Alcaligenes sp. HPC1271 [AMXV]
27919
27835
-
Leu
CAG
[ENA]
¡û
>W131223058
AUBT01000005
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus DSM 16503 [AUBT]
258923
259007
+
Leu
CAG
[ENA]
¡û
>W131223059
AUBT01000005
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus DSM 16503 [AUBT]
266074
266158
+
Leu
CAG
[ENA]
¡û
>W131223060
AUBT01000005
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus DSM 16503 [AUBT]
263830
263746
-
Leu
CAG
[ENA]
¡û
>C014768
AL954747
Betaproteobacteria
Nitrosomonas europaea ATCC 19718 [AL954747]
392236
392152
-
Leu
CAG
[Ensembl]
¡û
>C014784
CP000450
Betaproteobacteria
Nitrosomonas eutropha C91 [CP000450]
1702900
1702984
+
Leu
CAG
[Ensembl]
¡û
>WENV180285727
OBID01654794
[OBID] metagenome; sludge
49
133
+
Leu
CAG
[ENA]
¢þ
>WENV180296757
OBJA01002376
[OBJA] soil metagenome; sediment, water from around vicinity
1084
1000
-
Leu
CAG
[ENA]
¢þ
>w002432
AABB02000001
Betaproteobacteria
Nitrosomonas europaea [AABB]
392238
392152
-
Leu
CAG
[ENA]
¡û
>W141104399
AVOG02000001
Betaproteobacteria
Alcaligenes sp. EGD-AK7 [AVOG]
112817
112901
+
Leu
CAG
[ENA]
¡û
>W141104409
AVOG02000001
Betaproteobacteria
Alcaligenes sp. EGD-AK7 [AVOG]
117873
117789
-
Leu
CAG
[ENA]
¡û
>W141104410
AVOG02000001
Betaproteobacteria
Alcaligenes sp. EGD-AK7 [AVOG]
110572
110488
-
Leu
CAG
[ENA]
¡û
>WENV181173159
OEIV011246049
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
108
192
+
Leu
CAG
[ENA]
¢þ
>WENV181188450
OEOE01136347
[OEOE] activated sludge metagenome; Activated Sludge
225
141
-
Leu
CAG
[ENA]
¢þ
>WENV181364871
OFPE01008620
[OFPE] sediment metagenome; Lake sediment
123
39
-
Leu
CAG
[ENA]
¢þ
>WENV181364971
OFPG01002906
[OFPG] sediment metagenome; Lake sediment
213
129
-
Leu
CAG
[ENA]
¢þ
>W141237700
BBJQ01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ]
758136
758220
+
Leu
CAG
[ENA]
¡û
>W141237701
BBJQ01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ]
769048
769132
+
Leu
CAG
[ENA]
¡û
>W141237703
BBJQ01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ]
766806
766722
-
Leu
CAG
[ENA]
¡û
>WENV183739613
PJUE01040652
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
207
291
+
Leu
CAG
[ENA]
¢þ
>WENV183741226
PJUF01060611
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
134
50
-
Leu
CAG
[ENA]
¢þ
>WENV183746394
POVV01038800
[POVV] bioreactor metagenome; anaerobic chemostat enrichment culture, galacturonate as sole carbon source, pH 8; inoculated with
419
335
-
Leu
CAG
[ENA]
¢þ
>WENV170556437
CXWL01008643
[CXWL] groundwater metagenome; biofilm material
1124
1040
-
Leu
CAG
[ENA]
¢þ
>WENV170557576
CXWL01030839
[CXWL] groundwater metagenome; biofilm material
3716
3800
+
Leu
CAG
[ENA]
¢þ
>WENV170557577
CXWL01030840
[CXWL] groundwater metagenome; biofilm material
14632
14716
+
Leu
CAG
[ENA]
¢þ
>WENV170559583
CXWL01131203
[CXWL] groundwater metagenome; biofilm material
638
554
-
Leu
CAG
[ENA]
¢þ
>WENV170576486
FRDC01000712
[FRDC] freshwater metagenome; water
21365
21449
+
Leu
CAG
[ENA]
¢þ
>WENV170577811
FSSH01001504
[FSSH] freshwater metagenome; drinking water
56314
56230
-
Leu
CAG
[ENA]
¢þ
>WENV170622663
FUWD013115596
[FUWD] metagenome; unknown
532
616
+
Leu
CAG
[ENA]
¢þ
>WENV170630877
FUWD013329399
[FUWD] metagenome; unknown
532
616
+
Leu
CAG
[ENA]
¢þ
>WENV170645960
JQGF01002274
[JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each
2252
2336
+
Leu
CAG
[ENA]
¢þ
>WENV170645961
JQGF01002276
[JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each
10
94
+
Leu
CAG
[ENA]
¢þ
>WENV170653268
JRYI01040235
[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
2258
2174
-
Leu
CAG
[ENA]
¢þ
>WENV170654959
JTFN01000255
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
1458
1374
-
Leu
CAG
[ENA]
¢þ
>WENV170655469
JTFN01035531
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
1073
989
-
Leu
CAG
[ENA]
¢þ
>WENV170655521
JTFN01041094
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
184
100
-
Leu
CAG
[ENA]
¢þ
>WENV170655783
JTFN01073368
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
209
125
-
Leu
CAG
[ENA]
¢þ
>WENV170655850
JTFN01083765
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
714
630
-
Leu
CAG
[ENA]
¢þ
>WENV170656116
JTFO01000231
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
12966
12882
-
Leu
CAG
[ENA]
¢þ
>WENV170656401
JTFO01012934
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
1048
1132
+
Leu
CAG
[ENA]
¢þ
>WENV170656402
JTFO01012934
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
2610
2526
-
Leu
CAG
[ENA]
¢þ
>WENV170656843
JTFO01051362
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
107
23
-
Leu
CAG
[ENA]
¢þ
>WENV170656885
JTFO01055141
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
651
567
-
Leu
CAG
[ENA]
¢þ
>WENV170657490
JTFO01168016
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
286
202
-
Leu
CAG
[ENA]
¢þ
>WENV170657521
JTFO01178083
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
29
113
+
Leu
CAG
[ENA]
¢þ
>WENV170707790
LNAP01034252
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2468
2384
-
Leu
CAG
[ENA]
¢þ
>WENV170708211
LNAP01059084
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
14
98
+
Leu
CAG
[ENA]
¢þ
>WENV170712449
LNFM01013453
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
5258
5342
+
Leu
CAG
[ENA]
¢þ
>WENV170713540
LNFM01034173
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
1369
1285
-
Leu
CAG
[ENA]
¢þ
>WENV170714804
LNFM01103425
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
1078
1162
+
Leu
CAG
[ENA]
¢þ
>WENV170965749
MTEV01001912
[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
1228
1144
-
Leu
CAG
[ENA]
¢þ
>C181053225
CP021641
Betaproteobacteria
Alcaligenes faecalis JQ135 [CP021641]
2448409
2448493
+
Leu
CAG
-
¡û
>C181053226
CP021641
Betaproteobacteria
Alcaligenes faecalis JQ135 [CP021641]
2452221
2452305
+
Leu
CAG
-
¡û
>C181053246
CP021641
Betaproteobacteria
Alcaligenes faecalis JQ135 [CP021641]
2449975
2449891
-
Leu
CAG
-
¡û
>C191085262
CP032153
Betaproteobacteria
Alcaligenes aquatilis QD168 [CP032153]
2663679
2663763
+
Leu
CAG
-
¡û
>C191085263
CP032153
Betaproteobacteria
Alcaligenes aquatilis QD168 [CP032153]
2673445
2673529
+
Leu
CAG
-
¡û
>C191085283
CP032153
Betaproteobacteria
Alcaligenes aquatilis QD168 [CP032153]
2671199
2671115
-
Leu
CAG
-
¡û
>C191091134
CP032521
Betaproteobacteria
Alcaligenes faecalis J481 [CP032521]
996707
996791
+
Leu
CAG
-
¡û
>C191091135
CP032521
Betaproteobacteria
Alcaligenes faecalis J481 [CP032521]
1000826
1000910
+
Leu
CAG
-
¡û
>C191091184
CP032521
Betaproteobacteria
Alcaligenes faecalis J481 [CP032521]
998581
998497
-
Leu
CAG
-
¡û
>C191113950
CP033861
Betaproteobacteria
Alcaligenes faecalis FDAARGOS_491 [CP033861]
3391181
3391265
+
Leu
CAG
-
¡û
>C191113951
CP033861
Betaproteobacteria
Alcaligenes faecalis FDAARGOS_491 [CP033861]
3402093
3402177
+
Leu
CAG
-
¡û
>C191113960
CP033861
Betaproteobacteria
Alcaligenes faecalis FDAARGOS_491 [CP033861]
3399851
3399767
-
Leu
CAG
-
¡û
>C191124986
CP034433
Betaproteobacteria
Iodobacter ciconiae H11R3 [CP034433]
1350175
1350091
-
Leu
CAG
-
¡û
>C191124987
CP034433
Betaproteobacteria
Iodobacter ciconiae H11R3 [CP034433]
1350029
1349945
-
Leu
CAG
-
¡û
>C191124988
CP034433
Betaproteobacteria
Iodobacter ciconiae H11R3 [CP034433]
1349876
1349792
-
Leu
CAG
-
¡û
>C191149620
CP036294
Betaproteobacteria
Alcaligenes faecalis AN70 [CP036294]
296007
296091
+
Leu
CAG
-
¡û
>C191149621
CP036294
Betaproteobacteria
Alcaligenes faecalis AN70 [CP036294]
299890
299974
+
Leu
CAG
-
¡û
>C191149670
CP036294
Betaproteobacteria
Alcaligenes faecalis AN70 [CP036294]
297650
297566
-
Leu
CAG
-
¡û
>W141565147
JIBI01000004
Betaproteobacteria
Nitrosomonas cryotolerans ATCC 49181 [JIBI]
78649
78733
+
Leu
CAG
[ENA]
¡û
>W09103388
AAJE01000005
Betaproteobacteria
Nitrosomonas eutropha C71 [AAJE]
76667
76751
+
Leu
CAG
[ENA]
¡û
>W09133567
ACPG01000006
Betaproteobacteria
Nitrosomonas sp. AL212 [ACPG]
48290
48374
+
Leu
CAG
[ENA]
¡û
>W1910226483
FMWO01000021
Betaproteobacteria
Nitrosomonas mobilis [FMWO]
4952
4868
-
Leu
CAG
[ENA]
¡û
>W1910338838
FSRO01000001
Betaproteobacteria
Nitrosomonas cryotolerans ATCC 49181 [FSRO]
2625383
2625299
-
Leu
CAG
[ENA]
¡û
>C09107571
CP001674
Betaproteobacteria
Methylovorus glucosotrophus SIP3-4 [CP001674]
1824522
1824606
+
Leu
CAG
[Ensembl]
¡û
>W1910730017
MHBT01000127
Betaproteobacteria
Methylophilales bacterium RIFCSPHIGHO2_02_FULL_57_10 [MHBT]
380
296
-
Leu
CAG
[ENA]
¡û
>W1911496614
OCMU01000002
Betaproteobacteria
Nitrosomonas ureae Nm42 [OCMU]
256024
255940
-
Leu
CAG
[ENA]
¡û
>W1810062097
PDNV01000007
Betaproteobacteria
Pollutimonas nitritireducens JR1/69-2-13 [PDNV]
261016
261100
+
Leu
CAG
[ENA]
¡û
>W1810062137
PDNW01000009
Betaproteobacteria
Pollutimonas subterranea JR1/69-3-13 [PDNW]
77181
77097
-
Leu
CAG
[ENA]
¡û
>W1810068027
PDZG01000009
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
15659
15743
+
Leu
CAG
[ENA]
¡û
>W1810068028
PDZG01000009
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
15832
15916
+
Leu
CAG
[ENA]
¡û
>W1810068029
PDZG01000009
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
15987
16071
+
Leu
CAG
[ENA]
¡û
>W1810068030
PDZG01000009
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
16142
16226
+
Leu
CAG
[ENA]
¡û
>W1810389532
PXXU01000005
Betaproteobacteria
Nitrosomonas supralitoralis APG5 [PXXU]
91402
91486
+
Leu
CAG
[ENA]
¡û
>W1810463542
PZZQ01000002
Betaproteobacteria
Nitrosomonas eutropha Nm19 [PZZQ]
12541
12457
-
Leu
CAG
[ENA]
¡û
>W1810463656
PZZS01000018
Betaproteobacteria
Nitrosomonas nitrosa Nm91 [PZZS]
31840
31756
-
Leu
CAG
[ENA]
¡û
>W1810463679
PZZT01000010
Betaproteobacteria
Nitrosomonas sp. Nm141 [PZZT]
60856
60772
-
Leu
CAG
[ENA]
¡û
>W1810464192
QAAE01000017
Betaproteobacteria
Nitrosomonas aestuarii Nm36 [QAAE]
13187
13103
-
Leu
CAG
[ENA]
¡û
>W1810476848
QAOI01000008
Betaproteobacteria
Nitrosomonas oligotropha Nm49 [QAOI]
94564
94480
-
Leu
CAG
[ENA]
¡û
>W1810476991
QAOL01000019
Betaproteobacteria
Nitrosomonas ureae Nm4 [QAOL]
16130
16214
+
Leu
CAG
[ENA]
¡û
>W1810477110
QAOO01000004
Betaproteobacteria
Nitrosomonas nitrosa Nm90 [QAOO]
160533
160449
-
Leu
CAG
[ENA]
¡û
>W1810583870
QEXO01000001
Betaproteobacteria
Alcaligenes faecalis YBY [QEXO]
749619
749703
+
Leu
CAG
[ENA]
¡û
>W1810583874
QEXO01000001
Betaproteobacteria
Alcaligenes faecalis YBY [QEXO]
758129
758045
-
Leu
CAG
[ENA]
¡û
>W1810583875
QEXO01000001
Betaproteobacteria
Alcaligenes faecalis YBY [QEXO]
747377
747293
-
Leu
CAG
[ENA]
¡û
>W1810628636
QICQ01000004
Betaproteobacteria
Nitrosomonas eutropha Nm 57 [QICQ]
5709
5625
-
Leu
CAG
[ENA]
¡û
>W1810658834
QJJP01000004
Betaproteobacteria
Nitrosomonas sp. Nm84 [QJJP]
48861
48777
-
Leu
CAG
[ENA]
¡û
>W1810659200
QJJW01000014
Betaproteobacteria
Nitrosomonas ureae Nm5 [QJJW]
37792
37708
-
Leu
CAG
[ENA]
¡û
>W1810696315
QLTE01000030
Betaproteobacteria
Nitrosomonas sp. Nm143 [QLTE]
15069
14985
-
Leu
CAG
[ENA]
¡û
>C151082860
CP011451
Betaproteobacteria
Nitrosomonas communis Nm2 [CP011451]
3678879
3678963
+
Leu
CAG
[Ensembl]
¡û
>ENV09001463
ABSR01012140
Freshwater sediment metagenome lwMethylamine_C1
590
674
+
Leu
CAG
[ENA]
¡û
>C10109373
CP002056
Betaproteobacteria
Methylotenera versatilis 301 [CP002056]
1407738
1407654
-
Leu
CAG
[Ensembl]
¡û
>C11114205
CP002252
Betaproteobacteria
Methylovorus sp. MP688 [CP002252]
1769539
1769623
+
Leu
CAG
[Ensembl]
¡û
>C11115620
CP002552
Betaproteobacteria
Nitrosomonas sp. AL212 [CP002552]
1274524
1274608
+
Leu
CAG
[Ensembl]
¡û
>C11115674
CP002876
Betaproteobacteria
Nitrosomonas sp. Is79A3 [CP002876]
2783163
2783079
-
Leu
CAG
[Ensembl]
¡û
>W1511321038
JQCV01000007
Betaproteobacteria
Alcaligenes faecalis MOR02 [JQCV]
98512
98596
+
Leu
CAG
[ENA]
¡û
>W1511321044
JQCV01000007
Betaproteobacteria
Alcaligenes faecalis MOR02 [JQCV]
111055
110971
-
Leu
CAG
[ENA]
¡û
>W1511321045
JQCV01000007
Betaproteobacteria
Alcaligenes faecalis MOR02 [JQCV]
96268
96184
-
Leu
CAG
[ENA]
¡û
>W1511537444
JZBR01000002
Betaproteobacteria
Alcaligenes faecalis ZD02 [JZBR]
346189
346273
+
Leu
CAG
[ENA]
¡û
>W1511537445
JZBR01000002
Betaproteobacteria
Alcaligenes faecalis ZD02 [JZBR]
356947
357031
+
Leu
CAG
[ENA]
¡û
>W1511537454
JZBR01000002
Betaproteobacteria
Alcaligenes faecalis ZD02 [JZBR]
354705
354621
-
Leu
CAG
[ENA]
¡û
>W1511552193
JZUG01000006
Betaproteobacteria
Janthinobacterium sp. B9-8 [JZUG]
196307
196223
-
Leu
CAG
[ENA]
¡û
>W1511552194
JZUG01000006
Betaproteobacteria
Janthinobacterium sp. B9-8 [JZUG]
196138
196054
-
Leu
CAG
[ENA]
¡û
>W1511552195
JZUG01000006
Betaproteobacteria
Janthinobacterium sp. B9-8 [JZUG]
195976
195892
-
Leu
CAG
[ENA]
¡û
>W1511552196
JZUG01000006
Betaproteobacteria
Janthinobacterium sp. B9-8 [JZUG]
195814
195730
-
Leu
CAG
[ENA]
¡û
>C161051331
CP013119
Betaproteobacteria
Alcaligenes faecalis ZD02 [CP013119]
346189
346273
+
Leu
CAG
[Ensembl]
¡û
>C161051332
CP013119
Betaproteobacteria
Alcaligenes faecalis ZD02 [CP013119]
356947
357031
+
Leu
CAG
[Ensembl]
¡û
>C161051383
CP013119
Betaproteobacteria
Alcaligenes faecalis ZD02 [CP013119]
354705
354621
-
Leu
CAG
[Ensembl]
¡û
>C161055578
CP013341
Betaproteobacteria
Nitrosomonas ureae Nm10 [CP013341]
2994179
2994095
-
Leu
CAG
[Ensembl]
¡û
>C161068587
CP014222
Betaproteobacteria
Janthinobacterium sp. B9-8 [CP014222]
1094670
1094586
-
Leu
CAG
[Ensembl]
¡û
>C161068588
CP014222
Betaproteobacteria
Janthinobacterium sp. B9-8 [CP014222]
1094501
1094417
-
Leu
CAG
[Ensembl]
¡û
>C161068589
CP014222
Betaproteobacteria
Janthinobacterium sp. B9-8 [CP014222]
1094339
1094255
-
Leu
CAG
[Ensembl]
¡û
>C161068590
CP014222
Betaproteobacteria
Janthinobacterium sp. B9-8 [CP014222]
1094177
1094093
-
Leu
CAG
[Ensembl]
¡û
>W121091186
AKMR01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR]
178781
178865
+
Leu
CAG
[ENA]
¡û
>W121091191
AKMR01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR]
180424
180340
-
Leu
CAG
[ENA]
¡û
>W121091192
AKMR01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR]
176541
176457
-
Leu
CAG
[ENA]
¡û
>W1610093557
CYTB01000003
Betaproteobacteria
Alcaligenes faecalis ATCC8750 [CYTB]
425570
425654
+
Leu
CAG
[ENA]
¡û
>W1610093559
CYTB01000003
Betaproteobacteria
Alcaligenes faecalis ATCC8750 [CYTB]
434240
434156
-
Leu
CAG
[ENA]
¡û
>W1610093560
CYTB01000003
Betaproteobacteria
Alcaligenes faecalis ATCC8750 [CYTB]
423328
423244
-
Leu
CAG
[ENA]
¡û
>W1610574699
JZQZ01000223
Betaproteobacteria
Nitrosomonas europaea [JZQZ]
1042
958
-
Leu
CAG
[ENA]
¡û
>W1610766003
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
9698
9782
+
Leu
CAG
[ENA]
¡û
>W1610766004
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
24482
24566
+
Leu
CAG
[ENA]
¡û
>W1610766005
LNOL01000023
Betaproteobacteria
Alcaligenes faecalis [LNOL]
22238
22154
-
Leu
CAG
[ENA]
¡û
>W1610850569
LQAS01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
2307
2391
+
Leu
CAG
[ENA]
¡û
>W1610850579
LQAS01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
3949
3865
-
Leu
CAG
[ENA]
¡û
>W1610921519
LSUO01000014
Betaproteobacteria
Alcaligenes faecalis P156 [LSUO]
343971
344055
+
Leu
CAG
[ENA]
¡û
>W1610921520
LSUO01000014
Betaproteobacteria
Alcaligenes faecalis P156 [LSUO]
354879
354963
+
Leu
CAG
[ENA]
¡û
>W1610921522
LSUO01000014
Betaproteobacteria
Alcaligenes faecalis P156 [LSUO]
352637
352553
-
Leu
CAG
[ENA]
¡û
>W1610947041
LUZQ01000008
Betaproteobacteria
Burkholderiales bacterium Beta_01 [LUZQ]
39367
39283
-
Leu
CAG
[ENA]
¡û
>W1611008615
LXUF01000001
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
1442318
1442402
+
Leu
CAG
[ENA]
¡û
>W1710082504
BDHG01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG]
189137
189221
+
Leu
CAG
[ENA]
¡û
>W1710082510
BDHG01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG]
197807
197723
-
Leu
CAG
[ENA]
¡û
>W1710082511
BDHG01000001
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG]
186895
186811
-
Leu
CAG
[ENA]
¡û
>W1710505674
FMTW01000001
Betaproteobacteria
Nitrosomonas eutropha [FMTW]
12541
12457
-
Leu
CAG
[ENA]
¡û
>W1710517426
FNDH01000086
Betaproteobacteria
Nitrosomonas sp. Nm132 [FNDH]
3425
3509
+
Leu
CAG
[ENA]
¡û
>W1710527963
FNLN01000052
Betaproteobacteria
Nitrosomonas ureae [FNLN]
12393
12477
+
Leu
CAG
[ENA]
¡û
>W1710528545
FNNH01000029
Betaproteobacteria
Nitrosomonas communis [FNNH]
24198
24282
+
Leu
CAG
[ENA]
¡û
>W1710528771
FNNM01000004
Betaproteobacteria
Nitrosomonas eutropha [FNNM]
920
836
-
Leu
CAG
[ENA]
¡û
>W1710529363
FNNX01000010
Betaproteobacteria
Nitrosomonas europaea [FNNX]
10755
10671
-
Leu
CAG
[ENA]
¡û
>W1710529719
FNOE01000022
Betaproteobacteria
Nitrosomonas oligotropha [FNOE]
39316
39400
+
Leu
CAG
[ENA]
¡û
>W1710530706
FNOY01000057
Betaproteobacteria
Nitrosomonas halophila [FNOY]
12206
12122
-
Leu
CAG
[ENA]
¡û
>W1710531189
FNPJ01000012
Betaproteobacteria
Nitrosomonas sp. Nm33 [FNPJ]
16021
15937
-
Leu
CAG
[ENA]
¡û
>W1710531594
FNPQ01000069
Betaproteobacteria
Nitrosomonas sp. Nm58 [FNPQ]
7299
7383
+
Leu
CAG
[ENA]
¡û
>W1710538914
FNUX01000023
Betaproteobacteria
Nitrosomonas ureae [FNUX]
43829
43913
+
Leu
CAG
[ENA]
¡û
>W1710541311
FNYF01000046
Betaproteobacteria
Nitrosomonas eutropha [FNYF]
5707
5623
-
Leu
CAG
[ENA]
¡û
>W1710546993
FOCP01000003
Betaproteobacteria
Nitrosomonas marina [FOCP]
48805
48721
-
Leu
CAG
[ENA]
¡û
>W1710548200
FODO01000021
Betaproteobacteria
Nitrosomonas oligotropha [FODO]
39354
39438
+
Leu
CAG
[ENA]
¡û
>W1710551228
FOFX01000022
Betaproteobacteria
Nitrosomonas ureae [FOFX]
42117
42201
+
Leu
CAG
[ENA]
¡û
>W1710551701
FOGH01000003
Betaproteobacteria
Nitrosomonas sp. Nm51 [FOGH]
40896
40980
+
Leu
CAG
[ENA]
¡û
>W1710553948
FOIA01000041
Betaproteobacteria
Nitrosomonas marina [FOIA]
17453
17537
+
Leu
CAG
[ENA]
¡û
>W1710554039
FOID01000010
Betaproteobacteria
Nitrosomonas europaea [FOID]
10755
10671
-
Leu
CAG
[ENA]
¡û
>W1710560174
FONE01000025
Betaproteobacteria
Nitrosomonas sp. Nm166 [FONE]
8331
8247
-
Leu
CAG
[ENA]
¡û
>W1710565326
FORD01000081
Betaproteobacteria
Nitrosomonas sp. Nm34 [FORD]
4828
4912
+
Leu
CAG
[ENA]
¡û
>W1710567261
FOSP01000010
Betaproteobacteria
Nitrosomonas aestuarii [FOSP]
83198
83282
+
Leu
CAG
[ENA]
¡û
>W1710569044
FOUB01000024
Betaproteobacteria
Nitrosomonas communis [FOUB]
17946
17862
-
Leu
CAG
[ENA]
¡û
>W1710569219
FOUF01000016
Betaproteobacteria
Nitrosomonas nitrosa [FOUF]
17618
17702
+
Leu
CAG
[ENA]
¡û
>W1710573490
FOXN01000004
Betaproteobacteria
Nitrosomonas cryotolerans [FOXN]
39033
38949
-
Leu
CAG
[ENA]
¡û
>W1710578260
FPBL01000003
Betaproteobacteria
Nitrosomonas eutropha [FPBL]
30249
30333
+
Leu
CAG
[ENA]
¡û
>W1710586410
FQXE01000007
Betaproteobacteria
Pollutimonas bauzanensis [FQXE]
59401
59317
-
Leu
CAG
[ENA]
¡û
>W1710600400
FUWK01000009
Betaproteobacteria
Nitrosomonas europaea [FUWK]
10817
10733
-
Leu
CAG
[ENA]
¡û
>W1710691934
JZQZ01000223
Betaproteobacteria
Nitrosomonas europaea [JZQZ]
1042
958
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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