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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.119569 (4 seq.)
>W131050940
AMXE01000069
Betaproteobacteria
Thauera linaloolentis 47Lol = DSM 12138 [AMXE]
18235
18151
-
Leu
TAA
[ENA]
¡û
>W2011008939
NOIH01000007
Betaproteobacteria
Thauera sp. KNDSS-Mac4 [NOIH]
203729
203645
-
Leu
TAA
[ENA]
¡û
>W2110507312
JAFKAB010000001
Betaproteobacteria
Zoogloeaceae bacterium ZN11-R3-1 [JAFKAB]
635227
635311
+
Leu
TAA
[ENA]
¡û
>C211289769
CP071321
Betaproteobacteria
Zoogloeaceae bacterium H1-1-2A [CP071321]
2250864
2250780
-
Leu
TAA
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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