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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.126691 (6 seq.)
>WENV181676206
OGOP01045190
[OGOP] human gut metagenome; faeces
579
660
+
Leu
TAG
[ENA]
¡û
>WENV181900934
OGXW01000127
[OGXW] human gut metagenome; faeces
43949
43868
-
Leu
TAG
[ENA]
¡û
>WENV181984961
OHAJ01000239
[OHAJ] human gut metagenome; faeces
17711
17792
+
Leu
TAG
[ENA]
¡û
>WENV182747176
OJQV01000555
[OJQV] human gut metagenome; stool sample
17707
17788
+
Leu
TAG
[ENA]
¡û
>WENV183363696
OLXL01016015
[OLXL] human gut metagenome; feces
610
529
-
Leu
TAG
[ENA]
¡û
>WENV183374646
OLXZ01007388
[OLXZ] human gut metagenome; feces
1509
1428
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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