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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.127277 (11 seq.)
>W2012106950
VOQT01000026
Betaproteobacteria
Comamonas sp. Z1 [VOQT]
1216
1133
-
Leu
TAG
[ENA]
¡û
>W2012143399
VTRK01000017
Betaproteobacteria
Comamonas thiooxydans JC12 [VTRK]
3205
3122
-
Leu
TAG
[ENA]
¡û
>C241162624
CP053920
Betaproteobacteria
Comamonas thiooxydans QYY [CP053920]
4956954
4957037
+
Leu
TAG
-
¡û
>W1610028502
AWOS01000047
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOS]
48294
48377
+
Leu
TAG
[ENA]
¡û
>W1610028567
AWOT01000025
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOT]
48309
48392
+
Leu
TAG
[ENA]
¡û
>W1610028619
AWOU01000023
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOU]
48300
48383
+
Leu
TAG
[ENA]
¡û
>W1610028677
AWOV01000024
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOV]
48300
48383
+
Leu
TAG
[ENA]
¡û
>W1710024404
AWOS01000047
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOS]
48294
48377
+
Leu
TAG
[ENA]
¡û
>W1710024469
AWOT01000025
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOT]
48309
48392
+
Leu
TAG
[ENA]
¡û
>W1710024521
AWOU01000023
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOU]
48300
48383
+
Leu
TAG
[ENA]
¡û
>W1710024579
AWOV01000024
Betaproteobacteria
Comamonas thiooxydans testosteroni [AWOV]
48300
48383
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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