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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.127643 (278 seq.)
>W1710915718
LNUL01000109
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis [LNUL]
838
756
-
Tyr
GTA
[ENA]
¡û
>W1710915724
LNUL01000114
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis [LNUL]
2395
2313
-
Tyr
GTA
[ENA]
¡û
>W1710915741
LNUL01000128
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis [LNUL]
924
1006
+
Tyr
GTA
[ENA]
¡û
>W131196450
ASTI01000008
Bacillota
Latilactobacillus sakei subsp. sakei LS25 [ASTI]
1209
1291
+
Tyr
GTA
[ENA]
¡û
>W131230436
AUHP01000011
Bacillota
Ligilactobacillus ceti DSM 22408 [AUHP]
328573
328491
-
Tyr
GTA
[ENA]
¡û
>W131230446
AUHP01000014
Bacillota
Ligilactobacillus ceti DSM 22408 [AUHP]
14816
14734
-
Tyr
GTA
[ENA]
¡û
>W131196472
ASTI01000023
Bacillota
Latilactobacillus sakei subsp. sakei LS25 [ASTI]
12458
12377
-
Tyr
GTA
[ENA]
¡û
>W1711484754
MKDC01000037
Bacillota
Latilactobacillus sakei [MKDC]
1208
1290
+
Tyr
GTA
[ENA]
¡û
>W1711484762
MKDC01000040
Bacillota
Latilactobacillus sakei [MKDC]
7272
7191
-
Tyr
GTA
[ENA]
¡û
>W1711484770
MKDD01000002
Bacillota
Latilactobacillus sakei [MKDD]
8234
8153
-
Tyr
GTA
[ENA]
¡û
>W1711484807
MKDD01000022
Bacillota
Latilactobacillus sakei [MKDD]
17722
17640
-
Tyr
GTA
[ENA]
¡û
>W1711484941
MKDG01000025
Bacillota
Latilactobacillus curvatus [MKDG]
2743
2824
+
Tyr
GTA
[ENA]
¡û
>W1711484951
MKDG01000043
Bacillota
Latilactobacillus curvatus [MKDG]
267
349
+
Tyr
GTA
[ENA]
¡û
>W1711485028
MKDI01000031
Bacillota
Latilactobacillus sakei [MKDI]
2972
3053
+
Tyr
GTA
[ENA]
¡û
>W1711485225
MKDR01000002
Bacillota
Latilactobacillus curvatus [MKDR]
248
330
+
Tyr
GTA
[ENA]
¡û
>W1711485244
MKDR01000036
Bacillota
Latilactobacillus curvatus [MKDR]
2068
1987
-
Tyr
GTA
[ENA]
¡û
>W1711487508
MKGB01000028
Bacillota
Latilactobacillus sakei [MKGB]
17364
17283
-
Tyr
GTA
[ENA]
¡û
>W1711487523
MKGB01000033
Bacillota
Latilactobacillus sakei [MKGB]
1241
1323
+
Tyr
GTA
[ENA]
¡û
>W1711487547
MKGC01000043
Bacillota
Latilactobacillus curvatus [MKGC]
2862
2943
+
Tyr
GTA
[ENA]
¡û
>W1711487586
MKGD01000060
Bacillota
Latilactobacillus curvatus [MKGD]
2068
1987
-
Tyr
GTA
[ENA]
¡û
>C171057533
CP017124
Bacillota
Latilactobacillus curvatus WiKim38 [CP017124]
375101
375182
+
Tyr
GTA
-
¡û
>C171057564
CP017124
Bacillota
Latilactobacillus curvatus WiKim38 [CP017124]
1552411
1552329
-
Tyr
GTA
-
¡û
>C171085947
CP018888
Bacillota
Amylolactobacillus amylophilus DSM 20533 = JCM 1125 [CP018888]
1156197
1156279
+
Tyr
GTA
-
¡û
>C171085979
CP018888
Bacillota
Amylolactobacillus amylophilus DSM 20533 = JCM 1125 [CP018888]
264338
264256
-
Tyr
GTA
-
¡û
>C012623
CR936503
Bacillota
Latilactobacillus sakei subsp. sakei 23K [CR936503]
452365
452445
+
Tyr
GTA
[Ensembl]
¡û
>C012653
CR936503
Bacillota
Latilactobacillus sakei subsp. sakei 23K [CR936503]
1569243
1569163
-
Tyr
GTA
[Ensembl]
¡û
>W141053793
AOCG01000002
Bacillota
Listeria aquatica FSL S10-1188 [AOCG]
131959
132042
+
Tyr
GTA
[ENA]
¡û
>W141228349
BALW01000007
Bacillota
Latilactobacillus sakei subsp. sakei JCM 1157 [BALW]
82786
82705
-
Tyr
GTA
[ENA]
¡û
>W141228372
BALW01000016
Bacillota
Latilactobacillus sakei subsp. sakei JCM 1157 [BALW]
26382
26300
-
Tyr
GTA
[ENA]
¡û
>W141229056
BAMJ01000070
Bacillota
Latilactobacillus fuchuensis JCM 11249 [BAMJ]
5
87
+
Tyr
GTA
[ENA]
¡û
>W141229076
BAMK01000026
Bacillota
Agrilactobacillus composti JCM 14202 [BAMK]
44856
44774
-
Tyr
GTA
[ENA]
¡û
>W141229100
BAMK01000059
Bacillota
Agrilactobacillus composti JCM 14202 [BAMK]
11661
11579
-
Tyr
GTA
[ENA]
¡û
>W09127621
ACLD01000070
Bacillota
Latilactobacillus sakei subsp. carnosus DSM 15831 [ACLD]
2901
2982
+
Tyr
GTA
[ENA]
¡û
>W09127627
ACLD01000109
Bacillota
Latilactobacillus sakei subsp. carnosus DSM 15831 [ACLD]
5
87
+
Tyr
GTA
[ENA]
¡û
>C181003613
AP017929
Bacillota
Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 LT-13 [AP017929]
866662
866743
+
Tyr
GTA
-
¡û
>C181003653
AP017929
Bacillota
Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 LT-13 [AP017929]
26392
26310
-
Tyr
GTA
-
¡û
>C181027720
CP017713
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM DSM 20001 [CP017713]
2694935
2694853
-
Tyr
GTA
-
¡û
>C181027730
CP017713
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM DSM 20001 [CP017713]
2060749
2060667
-
Tyr
GTA
-
¡û
>C181066068
CP022474
Bacillota
Latilactobacillus curvatus MRS6 [CP022474]
449593
449674
+
Tyr
GTA
-
¡û
>C181066099
CP022474
Bacillota
Latilactobacillus curvatus MRS6 [CP022474]
1625114
1625032
-
Tyr
GTA
-
¡û
>C181066133
CP022475
Bacillota
Latilactobacillus curvatus KG6 [CP022475]
447582
447663
+
Tyr
GTA
-
¡û
>C181066166
CP022475
Bacillota
Latilactobacillus curvatus KG6 [CP022475]
1620716
1620634
-
Tyr
GTA
-
¡û
>C181071477
CP022709
Bacillota
Latilactobacillus sakei WiKim0063 [CP022709]
5129
5211
+
Tyr
GTA
-
¡û
>C181071512
CP022709
Bacillota
Latilactobacillus sakei WiKim0063 [CP022709]
1177124
1177043
-
Tyr
GTA
-
¡û
>C181113656
CP025136
Bacillota
Latilactobacillus sakei WiKim0072 [CP025136]
1327068
1327150
+
Tyr
GTA
-
¡û
>C181113687
CP025136
Bacillota
Latilactobacillus sakei WiKim0072 [CP025136]
513156
513075
-
Tyr
GTA
-
¡û
>C181123536
CP025839
Bacillota
Latilactobacillus sakei DS4 [CP025839]
492410
492492
+
Tyr
GTA
-
¡û
>C181123566
CP025839
Bacillota
Latilactobacillus sakei DS4 [CP025839]
1765411
1765330
-
Tyr
GTA
-
¡û
>C181186065
CP029966
Bacillota
Latilactobacillus curvatus ZJUNIT8 [CP029966]
371883
371964
+
Tyr
GTA
-
¡û
>C181186096
CP029966
Bacillota
Latilactobacillus curvatus ZJUNIT8 [CP029966]
1505214
1505132
-
Tyr
GTA
-
¡û
>C181194809
CP031003
Bacillota
Latilactobacillus curvatus TMW 1.1928 [CP031003]
431154
431235
+
Tyr
GTA
-
¡û
>C181194840
CP031003
Bacillota
Latilactobacillus curvatus TMW 1.1928 [CP031003]
1639479
1639397
-
Tyr
GTA
-
¡û
>C181227424
LT960777
Bacillota
Latilactobacillus sakei FLEC01 [LT960777]
473168
473250
+
Tyr
GTA
-
¡û
>C181227450
LT960777
Bacillota
Latilactobacillus sakei FLEC01 [LT960777]
1583679
1583598
-
Tyr
GTA
-
¡û
>C181227480
LT960781
Bacillota
Latilactobacillus sakei J64 [LT960781]
491040
491122
+
Tyr
GTA
-
¡û
>C181227512
LT960781
Bacillota
Latilactobacillus sakei J64 [LT960781]
1739968
1739887
-
Tyr
GTA
-
¡û
>C181227543
LT960784
Bacillota
Latilactobacillus sakei [LT960784]
484523
484605
+
Tyr
GTA
-
¡û
>C181227573
LT960784
Bacillota
Latilactobacillus sakei [LT960784]
1662261
1662180
-
Tyr
GTA
-
¡û
>C181227604
LT960788
Bacillota
Latilactobacillus sakei MFPB16A1401 [LT960788]
494577
494659
+
Tyr
GTA
-
¡û
>C181227634
LT960788
Bacillota
Latilactobacillus sakei MFPB16A1401 [LT960788]
1679061
1678980
-
Tyr
GTA
-
¡û
>C191004181
AP018699
Bacillota
Latilactobacillus curvatus NFH-Km12 [AP018699]
432007
432088
+
Tyr
GTA
-
¡û
>C191004212
AP018699
Bacillota
Latilactobacillus curvatus NFH-Km12 [AP018699]
1545140
1545058
-
Tyr
GTA
-
¡û
>C191035496
CP025476
Bacillota
Latilactobacillus curvatus IRG2 [CP025476]
428887
428969
+
Tyr
GTA
-
¡û
>C191035528
CP025476
Bacillota
Latilactobacillus curvatus IRG2 [CP025476]
1596482
1596401
-
Tyr
GTA
-
¡û
>C191040481
CP026116
Bacillota
Latilactobacillus curvatus JCM 1096 = DSM 20019 [CP026116]
4987
5069
+
Tyr
GTA
-
¡û
>C191040516
CP026116
Bacillota
Latilactobacillus curvatus JCM 1096 = DSM 20019 [CP026116]
1162657
1162576
-
Tyr
GTA
-
¡û
>C191092632
CP032633
Bacillota
Latilactobacillus sakei ZFM220 [CP032633]
835614
835696
+
Tyr
GTA
-
¡û
>C191092669
CP032633
Bacillota
Latilactobacillus sakei ZFM220 [CP032633]
23114
23033
-
Tyr
GTA
-
¡û
>C191092695
CP032635
Bacillota
Latilactobacillus sakei ZFM225 [CP032635]
521295
521377
+
Tyr
GTA
-
¡û
>C191092725
CP032635
Bacillota
Latilactobacillus sakei ZFM225 [CP032635]
1673010
1672929
-
Tyr
GTA
-
¡û
>C191092815
CP032640
Bacillota
Latilactobacillus sakei ZFM229 [CP032640]
371439
371521
+
Tyr
GTA
-
¡û
>C191092846
CP032640
Bacillota
Latilactobacillus sakei ZFM229 [CP032640]
1523144
1523063
-
Tyr
GTA
-
¡û
>C191092981
CP032652
Bacillota
Latilactobacillus sakei LZ217 [CP032652]
173713
173794
+
Tyr
GTA
-
¡û
>C191093026
CP032652
Bacillota
Latilactobacillus sakei LZ217 [CP032652]
1325427
1325345
-
Tyr
GTA
-
¡û
>C191134857
CP035110
Bacillota
Latilactobacillus curvatus SRCM103465 [CP035110]
454585
454666
+
Tyr
GTA
-
¡û
>C191134888
CP035110
Bacillota
Latilactobacillus curvatus SRCM103465 [CP035110]
1618323
1618241
-
Tyr
GTA
-
¡û
>W1910228811
FNVY01000004
Bacillota
Enterococcus timonensis Marseille-P2817 [FNVY]
3791
3873
+
Tyr
GTA
[ENA]
¡û
>W1910228817
FNVY01000004
Bacillota
Enterococcus timonensis Marseille-P2817 [FNVY]
300688
300771
+
Tyr
GTA
[ENA]
¡û
>W1910471946
FXDK01000007
Bacillota
Lactobacillus curvatus [FXDK]
108
190
+
Tyr
GTA
[ENA]
¡û
>W1910751889
MKDL01000018
Bacillota
Lactobacillus sakei RI-493 [MKDL]
11398
11317
-
Tyr
GTA
[ENA]
¡û
>W1910751937
MKDM01000019
Bacillota
Lactobacillus sakei RI-496 [MKDM]
2933
3014
+
Tyr
GTA
[ENA]
¡û
>W1910751946
MKDM01000022
Bacillota
Lactobacillus sakei RI-496 [MKDM]
4439
4357
-
Tyr
GTA
[ENA]
¡û
>W1910752012
MKDO01000010
Bacillota
Lactobacillus sakei RI-500 [MKDO]
26426
26344
-
Tyr
GTA
[ENA]
¡û
>W1910752030
MKDO01000025
Bacillota
Lactobacillus sakei RI-500 [MKDO]
2933
3014
+
Tyr
GTA
[ENA]
¡û
>W1910753011
MKGG01000045
Bacillota
Lactobacillus sakei RI-516 [MKGG]
3012
3093
+
Tyr
GTA
[ENA]
¡û
>W1910753030
MKGG01000056
Bacillota
Lactobacillus sakei RI-516 [MKGG]
1207
1289
+
Tyr
GTA
[ENA]
¡û
>W1910753054
MKGH01000041
Bacillota
Lactobacillus sakei RI-517 [MKGH]
7593
7512
-
Tyr
GTA
[ENA]
¡û
>W1910753059
MKGH01000042
Bacillota
Lactobacillus sakei RI-517 [MKGH]
25440
25358
-
Tyr
GTA
[ENA]
¡û
>W1910841801
NAES01000002
Bacillota
Lactobacillus backii VTT E-123217 [NAES]
2245144
2245062
-
Tyr
GTA
[ENA]
¡û
>W1910841810
NAES01000002
Bacillota
Lactobacillus backii VTT E-123217 [NAES]
2137672
2137590
-
Tyr
GTA
[ENA]
¡û
>W1910841860
NAET01000009
Bacillota
Lactobacillus backii L101 [NAET]
1049924
1050006
+
Tyr
GTA
[ENA]
¡û
>W1911493386
OBHJ01000013
Bacillota
Lactobacillus sakei J18 [OBHJ]
94037
93956
-
Tyr
GTA
[ENA]
¡û
>W1911493396
OBHJ01000025
Bacillota
Lactobacillus sakei J18 [OBHJ]
102
184
+
Tyr
GTA
[ENA]
¡û
>W1911493462
OBHL01000008
Bacillota
Lactobacillus sakei J156 [OBHL]
1286
1368
+
Tyr
GTA
[ENA]
¡û
>W1911493487
OBHL01000035
Bacillota
Lactobacillus sakei J156 [OBHL]
5619
5538
-
Tyr
GTA
[ENA]
¡û
>W1911494617
OBKY01000012
Bacillota
Lactobacillus algidus CMTALT10 [OBKY]
89152
89069
-
Tyr
GTA
[ENA]
¡û
>W1911494633
OBKY01000019
Bacillota
Lactobacillus algidus CMTALT10 [OBKY]
104
186
+
Tyr
GTA
[ENA]
¡û
>W1911533872
OKRC01000003
Bacillota
Lactobacillus sakei CECT 9267 [OKRC]
3318
3399
+
Tyr
GTA
[ENA]
¡û
>W1911533910
OKRC01000014
Bacillota
Lactobacillus sakei CECT 9267 [OKRC]
26520
26438
-
Tyr
GTA
[ENA]
¡û
>W1911551470
OVTU01000001
Bacillota
Lactobacillus sakei CECT 9624 [OVTU]
3123
3204
+
Tyr
GTA
[ENA]
¡û
>W1911551514
OVTU01000006
Bacillota
Lactobacillus sakei CECT 9624 [OVTU]
1315
1397
+
Tyr
GTA
[ENA]
¡û
>W1911706036
QOSE01000001
Bacillota
Lactobacillus sakei TMW 1.411 [QOSE]
3318
3399
+
Tyr
GTA
[ENA]
¡û
>W1911706071
QOSE01000022
Bacillota
Lactobacillus sakei TMW 1.411 [QOSE]
26374
26292
-
Tyr
GTA
[ENA]
¡û
>W2010090491
BJDN01000003
Bacillota
Lactobacillus sp. 735-2 [BJDN]
17077
17159
+
Tyr
GTA
[ENA]
¡û
>W2010090529
BJDN01000033
Bacillota
Lactobacillus sp. 735-2 [BJDN]
615
697
+
Tyr
GTA
[ENA]
¡û
>W2010094641
BJLN01000019
Bacillota
Lactobacillus sakei NBRC 3541 [BJLN]
26393
26311
-
Tyr
GTA
[ENA]
¡û
>W2010094649
BJLN01000024
Bacillota
Lactobacillus sakei NBRC 3541 [BJLN]
7222
7141
-
Tyr
GTA
[ENA]
¡û
>W2010100567
BJVN01000018
Bacillota
Lactobacillus sakei subsp. sakei NBRC 15893 [BJVN]
2915
2996
+
Tyr
GTA
[ENA]
¡û
>W2010100570
BJVN01000021
Bacillota
Lactobacillus sakei subsp. sakei NBRC 15893 [BJVN]
5
87
+
Tyr
GTA
[ENA]
¡û
>W2010167001
CABFKU010000013
Bacillota
Lactobacillus sakei [CABFKU]
26572
26490
-
Tyr
GTA
[ENA]
¡û
>W2010167011
CABFKU010000020
Bacillota
Lactobacillus sakei [CABFKU]
7353
7272
-
Tyr
GTA
[ENA]
¡û
>W2010247137
CABIVZ020000043
Bacillota
Lactobacillus curvatus [CABIVZ]
1296
1378
+
Tyr
GTA
[ENA]
¡û
>W2010247149
CABIVZ020000058
Bacillota
Lactobacillus curvatus [CABIVZ]
4253
4172
-
Tyr
GTA
[ENA]
¡û
>W2010283537
CABMJT010000001
Bacillota
Lactobacillus sakei [CABMJT]
473168
473250
+
Tyr
GTA
[ENA]
¡û
>W2010283563
CABMJT010000001
Bacillota
Lactobacillus sakei [CABMJT]
1583679
1583598
-
Tyr
GTA
[ENA]
¡û
>W2010382787
FNVY01000004
Bacillota
Enterococcus timonensis Marseille-P2817 [FNVY]
3791
3873
+
Tyr
GTA
[ENA]
¡û
>W2010382793
FNVY01000004
Bacillota
Enterococcus timonensis Marseille-P2817 [FNVY]
300688
300771
+
Tyr
GTA
[ENA]
¡û
>W2010410851
FXDK01000007
Bacillota
Lactobacillus curvatus [FXDK]
108
190
+
Tyr
GTA
[ENA]
¡û
>W2010548588
JAARRM010000004
Bacillota
Listeria aquatica FSL L7-1507 [JAARRM]
93583
93500
-
Tyr
GTA
[ENA]
¡û
>W2010652394
JABZEC010000005
Bacillota
Lactobacillus sp. DCY120 [JABZEC]
5531
5611
+
Tyr
GTA
[ENA]
¡û
>W2010652427
JABZEC010000008
Bacillota
Lactobacillus sp. DCY120 [JABZEC]
1915
1997
+
Tyr
GTA
[ENA]
¡û
>W2010882830
MKDL01000018
Bacillota
Lactobacillus sakei RI-493 [MKDL]
11398
11317
-
Tyr
GTA
[ENA]
¡û
>W2010882878
MKDM01000019
Bacillota
Lactobacillus sakei RI-496 [MKDM]
2933
3014
+
Tyr
GTA
[ENA]
¡û
>W2010882887
MKDM01000022
Bacillota
Lactobacillus sakei RI-496 [MKDM]
4439
4357
-
Tyr
GTA
[ENA]
¡û
>W2010882953
MKDO01000010
Bacillota
Lactobacillus sakei RI-500 [MKDO]
26426
26344
-
Tyr
GTA
[ENA]
¡û
>W2010882971
MKDO01000025
Bacillota
Lactobacillus sakei RI-500 [MKDO]
2933
3014
+
Tyr
GTA
[ENA]
¡û
>W2010883191
MKGG01000045
Bacillota
Lactobacillus sakei RI-516 [MKGG]
3012
3093
+
Tyr
GTA
[ENA]
¡û
>W2010883210
MKGG01000056
Bacillota
Lactobacillus sakei RI-516 [MKGG]
1207
1289
+
Tyr
GTA
[ENA]
¡û
>W2010883234
MKGH01000041
Bacillota
Lactobacillus sakei RI-517 [MKGH]
7593
7512
-
Tyr
GTA
[ENA]
¡û
>W2010883239
MKGH01000042
Bacillota
Lactobacillus sakei RI-517 [MKGH]
25440
25358
-
Tyr
GTA
[ENA]
¡û
>W2010931368
NAES01000002
Bacillota
Lactobacillus backii VTT E-123217 [NAES]
2245144
2245062
-
Tyr
GTA
[ENA]
¡û
>W2010931377
NAES01000002
Bacillota
Lactobacillus backii VTT E-123217 [NAES]
2137672
2137590
-
Tyr
GTA
[ENA]
¡û
>W2010931427
NAET01000009
Bacillota
Lactobacillus backii L101 [NAET]
1049924
1050006
+
Tyr
GTA
[ENA]
¡û
>W2011154337
OBHJ01000013
Bacillota
Lactobacillus sakei J18 [OBHJ]
94037
93956
-
Tyr
GTA
[ENA]
¡û
>W2011154347
OBHJ01000025
Bacillota
Lactobacillus sakei J18 [OBHJ]
102
184
+
Tyr
GTA
[ENA]
¡û
>W2011154413
OBHL01000008
Bacillota
Lactobacillus sakei J156 [OBHL]
1286
1368
+
Tyr
GTA
[ENA]
¡û
>W2011154438
OBHL01000035
Bacillota
Lactobacillus sakei J156 [OBHL]
5619
5538
-
Tyr
GTA
[ENA]
¡û
>W2011155568
OBKY01000012
Bacillota
Lactobacillus algidus CMTALT10 [OBKY]
89152
89069
-
Tyr
GTA
[ENA]
¡û
>W2011155584
OBKY01000019
Bacillota
Lactobacillus algidus CMTALT10 [OBKY]
104
186
+
Tyr
GTA
[ENA]
¡û
>W2011166559
OKRC01000003
Bacillota
Lactobacillus sakei CECT 9267 [OKRC]
3318
3399
+
Tyr
GTA
[ENA]
¡û
>W2011166597
OKRC01000014
Bacillota
Lactobacillus sakei CECT 9267 [OKRC]
26520
26438
-
Tyr
GTA
[ENA]
¡û
>W2011175375
OVTU01000001
Bacillota
Lactobacillus sakei CECT 9624 [OVTU]
3123
3204
+
Tyr
GTA
[ENA]
¡û
>W2011175419
OVTU01000006
Bacillota
Lactobacillus sakei CECT 9624 [OVTU]
1315
1397
+
Tyr
GTA
[ENA]
¡û
>W2011222454
PUFE01000009
Bacillota
Lactobacillus sakei subsp. sakei ATCC 15521 [PUFE]
3119
3200
+
Tyr
GTA
[ENA]
¡û
>W2011222461
PUFE01000016
Bacillota
Lactobacillus sakei subsp. sakei ATCC 15521 [PUFE]
28154
28072
-
Tyr
GTA
[ENA]
¡û
>W2011281153
QOSE01000001
Bacillota
Lactobacillus sakei TMW 1.411 [QOSE]
3318
3399
+
Tyr
GTA
[ENA]
¡û
>W2011281188
QOSE01000022
Bacillota
Lactobacillus sakei TMW 1.411 [QOSE]
26374
26292
-
Tyr
GTA
[ENA]
¡û
>W2011421589
RHNP01000012
Bacillota
Lactobacillus iwatensis JCM 18838 [RHNP]
61196
61114
-
Tyr
GTA
[ENA]
¡û
>W2011421598
RHNP01000015
Bacillota
Lactobacillus iwatensis JCM 18838 [RHNP]
593
675
+
Tyr
GTA
[ENA]
¡û
>W2011421678
RHNQ01000100
Bacillota
Lactobacillus backii JCM 18665 [RHNQ]
244
326
+
Tyr
GTA
[ENA]
¡û
>W2011422387
RHOE01000005
Bacillota
Lactobacillus sp. 187-3 [RHOE]
13861
13943
+
Tyr
GTA
[ENA]
¡û
>W2011422426
RHOE01000100
Bacillota
Lactobacillus sp. 187-3 [RHOE]
4823
4741
-
Tyr
GTA
[ENA]
¡û
>W2011423169
RHOT01000025
Bacillota
Lactobacillus sp. 143-1 [RHOT]
14374
14456
+
Tyr
GTA
[ENA]
¡û
>W2011423220
RHOU01000005
Bacillota
Lactobacillus sp. 17-4 [RHOU]
127801
127883
+
Tyr
GTA
[ENA]
¡û
>W2011423236
RHOV01000002
Bacillota
Lactobacillus sp. 247-4 [RHOV]
231695
231613
-
Tyr
GTA
[ENA]
¡û
>W2011423243
RHOV01000005
Bacillota
Lactobacillus sp. 247-4 [RHOV]
11104
11186
+
Tyr
GTA
[ENA]
¡û
>W2011423307
RHOW01000096
Bacillota
Lactobacillus sp. 143-6 [RHOW]
324
241
-
Tyr
GTA
[ENA]
¡û
>W2011536102
SCIF01000021
Bacillota
Lactobacillus sakei L15 [SCIF]
24786
24704
-
Tyr
GTA
[ENA]
¡û
>W2011536114
SCIF01000034
Bacillota
Lactobacillus sakei L15 [SCIF]
3254
3335
+
Tyr
GTA
[ENA]
¡û
>W2011680377
SRRQ01000005
Bacillota
Lactobacillus algidus LTS37-1 [SRRQ]
2698
2781
+
Tyr
GTA
[ENA]
¡û
>W2011680700
SRSA01000005
Bacillota
Lactobacillus algidus NAGRM3a-7 [SRSA]
89204
89121
-
Tyr
GTA
[ENA]
¡û
>W2011680703
SRSA01000006
Bacillota
Lactobacillus algidus NAGRM3a-7 [SRSA]
80
162
+
Tyr
GTA
[ENA]
¡û
>W2011863607
UTAE01000009
Bacillota
Listeria thailandensis [UTAE]
221491
221408
-
Tyr
GTA
[ENA]
¡û
>W2012358445
WKKT01000018
Bacillota
Lactobacillus curvatus VRA_2sq_n [WKKT]
2789
2871
+
Tyr
GTA
[ENA]
¡û
>W2012358458
WKKT01000020
Bacillota
Lactobacillus curvatus VRA_2sq_n [WKKT]
82
-1
-
Tyr
GTA
[ENA]
¡û
>W2012358818
WKLA01000002
Bacillota
Lactobacillus curvatus VRA_2sq_f [WKLA]
267623
267542
-
Tyr
GTA
[ENA]
¡û
>W2012358856
WKLA01000010
Bacillota
Lactobacillus curvatus VRA_2sq_f [WKLA]
1264
1346
+
Tyr
GTA
[ENA]
¡û
>W2110119022
CAJOCG010000001
Bacillota
Latilactobacillus sp. AMBP252 [CAJOCG]
278749
278668
-
Tyr
GTA
[ENA]
¡û
>W2110119065
CAJOCG010000017
Bacillota
Latilactobacillus sp. AMBP252 [CAJOCG]
22388
22306
-
Tyr
GTA
[ENA]
¡û
>W2110588385
JAHBBS010000100
Bacillota
Loigolactobacillus coryniformis subsp. torquens 14I [JAHBBS]
25391
25309
-
Tyr
GTA
[ENA]
¡û
>W2110588394
JAHBBS010000125
Bacillota
Loigolactobacillus coryniformis subsp. torquens 14I [JAHBBS]
319
237
-
Tyr
GTA
[ENA]
¡û
>W2110588436
JAHBBT010000107
Bacillota
Loigolactobacillus coryniformis subsp. torquens 42L [JAHBBT]
25440
25358
-
Tyr
GTA
[ENA]
¡û
>W2110588445
JAHBBT010000133
Bacillota
Loigolactobacillus coryniformis subsp. torquens 42L [JAHBBT]
319
237
-
Tyr
GTA
[ENA]
¡û
>C211025649
AP024685
Bacillota
Latilactobacillus curvatus WDN19 [AP024685]
1523347
1523428
+
Tyr
GTA
-
¡û
>C211025678
AP024685
Bacillota
Latilactobacillus curvatus WDN19 [AP024685]
769090
769008
-
Tyr
GTA
-
¡û
>C211338008
CP075489
Bacillota
Latilactobacillus sakei subsp. sakei ob4.1 [CP075489]
533506
533588
+
Tyr
GTA
-
¡û
>C211338038
CP075489
Bacillota
Latilactobacillus sakei subsp. sakei ob4.1 [CP075489]
1719724
1719643
-
Tyr
GTA
-
¡û
>C231029061
CP015489
Bacillota
Latilactobacillus curvatus TMW 1.439 [CP015489]
353034
353116
+
Tyr
GTA
-
¡û
>C231029093
CP015489
Bacillota
Latilactobacillus curvatus TMW 1.439 [CP015489]
1527848
1527767
-
Tyr
GTA
-
¡û
>C231029180
CP015493
Bacillota
Latilactobacillus curvatus TMW 1.1381 [CP015493]
419737
419818
+
Tyr
GTA
-
¡û
>C231029211
CP015493
Bacillota
Latilactobacillus curvatus TMW 1.1381 [CP015493]
1595526
1595444
-
Tyr
GTA
-
¡û
>C231029777
CP016216
Bacillota
Latilactobacillus curvatus TMW 1.401 [CP016216]
370567
370649
+
Tyr
GTA
-
¡û
>C231029809
CP016216
Bacillota
Latilactobacillus curvatus TMW 1.401 [CP016216]
1465385
1465304
-
Tyr
GTA
-
¡û
>C231029840
CP016218
Bacillota
Latilactobacillus curvatus TMW 1.407 [CP016218]
357556
357638
+
Tyr
GTA
-
¡û
>C231029872
CP016218
Bacillota
Latilactobacillus curvatus TMW 1.407 [CP016218]
1466131
1466050
-
Tyr
GTA
-
¡û
>C231029903
CP016221
Bacillota
Latilactobacillus curvatus TMW 1.421 [CP016221]
352470
352552
+
Tyr
GTA
-
¡û
>C231029935
CP016221
Bacillota
Latilactobacillus curvatus TMW 1.421 [CP016221]
1503579
1503498
-
Tyr
GTA
-
¡û
>C231029960
CP016465
Bacillota
Latilactobacillus sakei TMW 1.3 [CP016465]
323593
323674
+
Tyr
GTA
-
¡û
>C231029992
CP016465
Bacillota
Latilactobacillus sakei TMW 1.3 [CP016465]
1453353
1453271
-
Tyr
GTA
-
¡û
>C231030030
CP016467
Bacillota
Latilactobacillus curvatus TMW 1.27 [CP016467]
1371532
1371451
-
Tyr
GTA
-
¡û
>C231030248
CP017271
Bacillota
Latilactobacillus sakei subsp. sakei TMW 1.1189 [CP017271]
532756
532838
+
Tyr
GTA
-
¡û
>C231030277
CP017271
Bacillota
Latilactobacillus sakei subsp. sakei TMW 1.1189 [CP017271]
1634545
1634464
-
Tyr
GTA
-
¡û
>C231030433
CP017275
Bacillota
Latilactobacillus sakei TMW 1.1398 [CP017275]
456567
456649
+
Tyr
GTA
-
¡û
>C231030465
CP017275
Bacillota
Latilactobacillus sakei TMW 1.1398 [CP017275]
1630050
1629969
-
Tyr
GTA
-
¡û
>C231030498
CP017566
Bacillota
Latilactobacillus sakei TMW 1.114 [CP017566]
470775
470857
+
Tyr
GTA
-
¡û
>C231030528
CP017566
Bacillota
Latilactobacillus sakei TMW 1.114 [CP017566]
1625673
1625592
-
Tyr
GTA
-
¡û
>C231030561
CP017568
Bacillota
Latilactobacillus sakei TMW 1.417 [CP017568]
481050
481132
+
Tyr
GTA
-
¡û
>C231030591
CP017568
Bacillota
Latilactobacillus sakei TMW 1.417 [CP017568]
1599625
1599544
-
Tyr
GTA
-
¡û
>C231146084
CP076099
Bacillota
Latilactobacillus curvatus SPC-SNU 70-3 [CP076099]
381613
381694
+
Tyr
GTA
-
¡û
>C231146115
CP076099
Bacillota
Latilactobacillus curvatus SPC-SNU 70-3 [CP076099]
1509622
1509540
-
Tyr
GTA
-
¡û
>C231413037
CP099485
Bacillota
Latilactobacillus sakei WiKim0095 [CP099485]
484157
484239
+
Tyr
GTA
-
¡û
>C231413067
CP099485
Bacillota
Latilactobacillus sakei WiKim0095 [CP099485]
1677985
1677904
-
Tyr
GTA
-
¡û
>C231547857
CP113247
Bacillota
Latilactobacillus sakei CNSC001WB [CP113247]
575360
575442
+
Tyr
GTA
-
¡û
>C231547887
CP113247
Bacillota
Latilactobacillus sakei CNSC001WB [CP113247]
1723243
1723162
-
Tyr
GTA
-
¡û
>C231572787
CP116016
Bacillota
Latilactobacillus curvatus SRCM217410 [CP116016]
377888
377969
+
Tyr
GTA
-
¡û
>C231572819
CP116016
Bacillota
Latilactobacillus curvatus SRCM217410 [CP116016]
1539965
1539883
-
Tyr
GTA
-
¡û
>C231649380
CP122959
Bacillota
Latilactobacillus sakei HUP1 [CP122959]
539674
539756
+
Tyr
GTA
-
¡û
>C231649410
CP122959
Bacillota
Latilactobacillus sakei HUP1 [CP122959]
1835409
1835328
-
Tyr
GTA
-
¡û
>W2110777393
VSTE01000003
Bacillota
Latilactobacillus sakei E13G [VSTE]
3123
3204
+
Tyr
GTA
[ENA]
¡û
>W2110777429
VSTE01000012
Bacillota
Latilactobacillus sakei E13G [VSTE]
1315
1397
+
Tyr
GTA
[ENA]
¡û
>C241008777
AP026801
Bacillota
Xylocopilactobacillus apis KimC2 [AP026801]
1949994
1949912
-
Tyr
GTA
-
¡û
>C241008782
AP026801
Bacillota
Xylocopilactobacillus apis KimC2 [AP026801]
1853841
1853761
-
Tyr
GTA
-
¡û
>C241008828
AP026802
Bacillota
Xylocopilactobacillus apicola XA3 [AP026802]
2032068
2031986
-
Tyr
GTA
-
¡û
>C241008833
AP026802
Bacillota
Xylocopilactobacillus apicola XA3 [AP026802]
1775583
1775503
-
Tyr
GTA
-
¡û
>C241104936
CP046037
Bacillota
Latilactobacillus sakei CBA3614 [CP046037]
1251151
1251233
+
Tyr
GTA
-
¡û
>C241104967
CP046037
Bacillota
Latilactobacillus sakei CBA3614 [CP046037]
440005
439924
-
Tyr
GTA
-
¡û
>C241127878
CP048116
Bacillota
Latilactobacillus sakei MBEL1397 [CP048116]
1536908
1536990
+
Tyr
GTA
-
¡û
>C241127909
CP048116
Bacillota
Latilactobacillus sakei MBEL1397 [CP048116]
733847
733766
-
Tyr
GTA
-
¡û
>C241178963
CP059697
Bacillota
Latilactobacillus sakei CBA3635 [CP059697]
722936
723017
+
Tyr
GTA
-
¡û
>C241178993
CP059697
Bacillota
Latilactobacillus sakei CBA3635 [CP059697]
1883578
1883496
-
Tyr
GTA
-
¡û
>C241248460
CP123581
Bacillota
Latilactobacillus curvatus ZHA1 [CP123581]
384904
384985
+
Tyr
GTA
-
¡û
>C241248492
CP123581
Bacillota
Latilactobacillus curvatus ZHA1 [CP123581]
1527875
1527793
-
Tyr
GTA
-
¡û
>W2310019327
BROC01000022
Bacillota
30-1(2) [BROC]
6942
7024
+
Tyr
GTA
[ENA]
¡û
>W2310019334
BROC01000023
Bacillota
30-1(2) [BROC]
41051
40969
-
Tyr
GTA
[ENA]
¡û
>WENV11100310
AEKF01000039
Food metagenome, Jonggazip commercial cabbage kimchi
1188
1270
+
Tyr
GTA
[ENA]
¡û
>W1511344711
JRFY01000045
Bacillota
Latilactobacillus sakei wikim 22 [JRFY]
104
186
+
Tyr
GTA
[ENA]
¡û
>W1511344726
JRFY01000066
Bacillota
Latilactobacillus sakei wikim 22 [JRFY]
3013
3094
+
Tyr
GTA
[ENA]
¡û
>W1511344734
JRFY01000135
Bacillota
Latilactobacillus sakei wikim 22 [JRFY]
66
147
+
Tyr
GTA
[ENA]
¡û
>W1511402295
JTJV01000093
Bacillota
Latilactobacillus curvatus NRIC0822 [JTJV]
4206
4125
-
Tyr
GTA
[ENA]
¡û
>W1511402319
JTJV01000136
Bacillota
Latilactobacillus curvatus NRIC0822 [JTJV]
1250
1332
+
Tyr
GTA
[ENA]
¡û
>W11140751
AELK01000020
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 [AELK]
187
105
-
Tyr
GTA
[ENA]
¡û
>W11142077
AEOS01000070
Bacillota
Loigolactobacillus coryniformis subsp. torquens KCTC 3535 [AEOS]
21686
21604
-
Tyr
GTA
[ENA]
¡û
>W11142107
AEOS01000280
Bacillota
Loigolactobacillus coryniformis subsp. torquens KCTC 3535 [AEOS]
21165
21247
+
Tyr
GTA
[ENA]
¡û
>C161079044
CP014873
Bacillota
Loigolactobacillus backii TMW 1.1989 [CP014873]
2606415
2606333
-
Tyr
GTA
[Ensembl]
¡û
>C161079055
CP014873
Bacillota
Loigolactobacillus backii TMW 1.1989 [CP014873]
53814
53732
-
Tyr
GTA
[Ensembl]
¡û
>C161079133
CP014890
Bacillota
Loigolactobacillus backii TMW 1.1992 [CP014890]
419409
419491
+
Tyr
GTA
-
¡û
>C161079189
CP014899
Bacillota
Loigolactobacillus backii TMW 1.2002 [CP014899]
1033562
1033644
+
Tyr
GTA
-
¡û
>C161079198
CP014899
Bacillota
Loigolactobacillus backii TMW 1.2002 [CP014899]
1153482
1153564
+
Tyr
GTA
-
¡û
>C161100157
CP016602
Bacillota
Latilactobacillus curvatus WiKim52 [CP016602]
577706
577788
+
Tyr
GTA
[Ensembl]
¡û
>C161100170
CP016602
Bacillota
Latilactobacillus curvatus WiKim52 [CP016602]
836610
836691
+
Tyr
GTA
[Ensembl]
¡û
>W121008327
AGBU01000098
Bacillota
Latilactobacillus curvatus CRL 705 [AGBU]
1193
1275
+
Tyr
GTA
[ENA]
¡û
>W121008313
AGBU01000073
Bacillota
Latilactobacillus curvatus CRL 705 [AGBU]
2829
2910
+
Tyr
GTA
[ENA]
¡û
>W1610031748
AYZB01000052
Bacillota
Latilactobacillus graminis DSM 20719 [AYZB]
19686
19604
-
Tyr
GTA
[ENA]
¡û
>W1610031759
AYZB01000058
Bacillota
Latilactobacillus graminis DSM 20719 [AYZB]
2204
2285
+
Tyr
GTA
[ENA]
¡û
>W1610032888
AZCN01000066
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM [AZCN]
14988
15070
+
Tyr
GTA
[ENA]
¡û
>W1610032898
AZCN01000074
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM [AZCN]
885
967
+
Tyr
GTA
[ENA]
¡û
>W1610033322
AZCV01000009
Bacillota
Amylolactobacillus amylotrophicus DSM 20534 [AZCV]
6329
6411
+
Tyr
GTA
[ENA]
¡û
>W1610033343
AZCV01000012
Bacillota
Amylolactobacillus amylotrophicus DSM 20534 [AZCV]
9668
9586
-
Tyr
GTA
[ENA]
¡û
>W1610033561
AZDA01000137
Bacillota
Loigolactobacillus bifermentans DSM 20003 [AZDA]
26131
26049
-
Tyr
GTA
[ENA]
¡û
>W1610033567
AZDA01000140
Bacillota
Loigolactobacillus bifermentans DSM 20003 [AZDA]
218131
218049
-
Tyr
GTA
[ENA]
¡û
>W1610033631
AZDC01000014
Bacillota
Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 [AZDC]
21799
21881
+
Tyr
GTA
[ENA]
¡û
>W1610033936
AZDI01000005
Bacillota
Dellaglioa algida DSM 15638 [AZDI]
3013
3096
+
Tyr
GTA
[ENA]
¡û
>W1610033946
AZDI01000009
Bacillota
Dellaglioa algida DSM 15638 [AZDI]
601
683
+
Tyr
GTA
[ENA]
¡û
>W1610034085
AZDL01000132
Bacillota
Latilactobacillus curvatus JCM 1096 = DSM 20019 [AZDL]
110
29
-
Tyr
GTA
[ENA]
¡û
>W1610034166
AZDN01000015
Bacillota
Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 [AZDN]
26377
26295
-
Tyr
GTA
[ENA]
¡û
>W1610037271
AZFX01000082
Bacillota
Lapidilactobacillus concavus DSM 17758 [AZFX]
3169
3086
-
Tyr
GTA
[ENA]
¡û
>W1610037288
AZFX01000092
Bacillota
Lapidilactobacillus concavus DSM 17758 [AZFX]
1227
1309
+
Tyr
GTA
[ENA]
¡û
>W1610037417
AZGA01000019
Bacillota
Agrilactobacillus composti DSM 18527 = JCM 14202 [AZGA]
44916
44834
-
Tyr
GTA
[ENA]
¡û
>W1610529297
JQBZ01000002
Bacillota
Ligilactobacillus ceti DSM 22408 [JQBZ]
14516
14434
-
Tyr
GTA
[ENA]
¡û
>W1610529326
JQBZ01000025
Bacillota
Ligilactobacillus ceti DSM 22408 [JQBZ]
809476
809394
-
Tyr
GTA
[ENA]
¡û
>W1710028675
AYZB01000052
Bacillota
Latilactobacillus graminis DSM 20719 [AYZB]
19686
19604
-
Tyr
GTA
[ENA]
¡û
>W1710028686
AYZB01000058
Bacillota
Latilactobacillus graminis DSM 20719 [AYZB]
2204
2285
+
Tyr
GTA
[ENA]
¡û
>W1710030219
AZCN01000066
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM [AZCN]
14988
15070
+
Tyr
GTA
[ENA]
¡û
>W1710030229
AZCN01000074
Bacillota
Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM [AZCN]
885
967
+
Tyr
GTA
[ENA]
¡û
>W1710030594
AZCV01000009
Bacillota
Amylolactobacillus amylotrophicus DSM 20534 [AZCV]
6329
6411
+
Tyr
GTA
[ENA]
¡û
>W1710030615
AZCV01000012
Bacillota
Amylolactobacillus amylotrophicus DSM 20534 [AZCV]
9668
9586
-
Tyr
GTA
[ENA]
¡û
>W1710030739
AZDA01000137
Bacillota
Loigolactobacillus bifermentans DSM 20003 [AZDA]
26131
26049
-
Tyr
GTA
[ENA]
¡û
>W1710030745
AZDA01000140
Bacillota
Loigolactobacillus bifermentans DSM 20003 [AZDA]
218131
218049
-
Tyr
GTA
[ENA]
¡û
>W1710030809
AZDC01000014
Bacillota
Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 [AZDC]
21799
21881
+
Tyr
GTA
[ENA]
¡û
>W1710031063
AZDI01000005
Bacillota
Dellaglioa algida DSM 15638 [AZDI]
3013
3096
+
Tyr
GTA
[ENA]
¡û
>W1710031073
AZDI01000009
Bacillota
Dellaglioa algida DSM 15638 [AZDI]
601
683
+
Tyr
GTA
[ENA]
¡û
>W1710031212
AZDL01000132
Bacillota
Latilactobacillus curvatus JCM 1096 = DSM 20019 [AZDL]
110
29
-
Tyr
GTA
[ENA]
¡û
>W1710031293
AZDN01000015
Bacillota
Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 [AZDN]
26377
26295
-
Tyr
GTA
[ENA]
¡û
>W1710034310
AZFX01000082
Bacillota
Lapidilactobacillus concavus DSM 17758 [AZFX]
3169
3086
-
Tyr
GTA
[ENA]
¡û
>W1710034327
AZFX01000092
Bacillota
Lapidilactobacillus concavus DSM 17758 [AZFX]
1227
1309
+
Tyr
GTA
[ENA]
¡û
>W1710034456
AZGA01000019
Bacillota
Agrilactobacillus composti DSM 18527 = JCM 14202 [AZGA]
44916
44834
-
Tyr
GTA
[ENA]
¡û
>W1710630887
JQBZ01000002
Bacillota
Ligilactobacillus ceti DSM 22408 [JQBZ]
14516
14434
-
Tyr
GTA
[ENA]
¡û
>W1710630916
JQBZ01000025
Bacillota
Ligilactobacillus ceti DSM 22408 [JQBZ]
809476
809394
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
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Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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