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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.127814 (16 seq.)
>W1711398664
MFAL01000001
Unclassified
Candidatus Collierbacteria bacterium RIFOXYA2_FULL_46_20 [MFAL]
771019
770938
-
Leu
TAG
[ENA]
¡û
>W1711398735
MFAN01000001
Unclassified
Candidatus Collierbacteria bacterium RIFOXYB2_FULL_46_14 [MFAN]
771019
770938
-
Leu
TAG
[ENA]
¡û
>W1711398775
MFAO01000001
Gammaproteobacteria
Pseudomonadales bacterium GWC2_63_15 [MFAO]
773060
772979
-
Leu
TAG
[ENA]
¡û
>W1711398815
MFAP01000001
Unclassified
Candidatus Collierbacteria bacterium RIFOXYC2_FULL_43_15 [MFAP]
771019
770938
-
Leu
TAG
[ENA]
¡û
>W1711398838
MFAQ01000004
Unclassified
Candidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9 [MFAQ]
6098
6181
+
Leu
TAG
[ENA]
¡û
>W1711398922
MFAS01000001
Unclassified
Candidatus Collierbacteria bacterium RIFOXYD2_FULL_45_13 [MFAS]
771019
770938
-
Leu
TAG
[ENA]
¡û
>W1711581672
MNUK01000060
Unclassified
Candidatus Collierbacteria bacterium CG1_02_44_10 [MNUK]
1548
1465
-
Leu
TAG
[ENA]
¡û
>W1511609532
LCFK01000016
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWC2_43_12 bacterium GW2011_GWC2_43_12 [LCFK]
11155
11072
-
Leu
TAG
[ENA]
¡û
>W1511611498
LCHT01000002
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWC2_44_13 bacterium GW2011_GWC2_44_13 [LCHT]
25698
25617
-
Leu
TAG
[ENA]
¡û
>W1511611570
LCHV01000009
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWA2_44_13 bacterium GW2011_GWA2_44_13 [LCHV]
35183
35266
+
Leu
TAG
[ENA]
¡û
>W1511611838
LCIF01000005
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWB1_44_197 bacterium GW2011_GWB1_44_197 [LCIF]
15463
15380
-
Leu
TAG
[ENA]
¡û
>W1511611885
LCIH01000005
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWB2_44_22 bacterium GW2011_GWB2_44_22 [LCIH]
29171
29088
-
Leu
TAG
[ENA]
¡û
>W1511612346
LCIU01000009
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWD1_44_27 bacterium GW2011_GWD1_44_27 [LCIU]
63254
63171
-
Leu
TAG
[ENA]
¡û
>W1511612418
LCIW01000005
Unclassified
Candidatus Collierbacteria bacterium GW2011_GWC2_44_30 bacterium GW2011_GWC2_44_30 [LCIW]
24831
24748
-
Leu
TAG
[ENA]
¡û
>W1511612551
LCJC01000001
Unclassified
Microgenomates group bacterium GW2011_GWC1_44_37 GW2011_GWC1_44_37 [LCJC]
53281
53364
+
Leu
TAG
[ENA]
¡û
>W1511612995
LCJS01000016
Unclassified
Microgenomates group bacterium GW2011_GWC1_44_9 GW2011_GWC1_44_9 [LCJS]
18294
18377
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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