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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.128672 (197 seq.)
>W1710860838
LMDE01000014
Actinomycetota
Nocardioides sp. Root122 [LMDE]
81533
81619
+
Leu
CAG
[ENA]
¡û
>W1710863701
LMFI01000010
Actinomycetota
Nocardioides sp. Root140 [LMFI]
1521767
1521851
+
Leu
CAG
[ENA]
¡û
>W1710864901
LMGG01000001
Actinomycetota
Nocardioides sp. Root151 [LMGG]
1656555
1656471
-
Leu
CAG
[ENA]
¡û
>W1710867826
LMIP01000011
Actinomycetota
Nocardioides sp. Root79 [LMIP]
944046
943962
-
Leu
CAG
[ENA]
¡û
>W1710868030
LMIT01000012
Actinomycetota
Nocardioides sp. Root240 [LMIT]
154247
154163
-
Leu
CAG
[ENA]
¡û
>W1710874079
LMNH01000004
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
587759
587843
+
Leu
CAG
[ENA]
¡û
>W1710874887
LMNY01000003
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
115769
115685
-
Leu
CAG
[ENA]
¡û
>W1710880870
LMSQ01000002
Actinomycetota
Nocardioides sp. Soil796 [LMSQ]
123301
123217
-
Leu
CAG
[ENA]
¡û
>W1710880918
LMSR01000002
Actinomycetota
Nocardioides sp. Soil797 [LMSR]
16627
16543
-
Leu
CAG
[ENA]
¡û
>W1711126744
LUPG01000367
Actinomycetota
Nocardioides sp. REDSEA-S25_B9 [LUPG]
460
376
-
Leu
CAG
[ENA]
¡û
>W1711126758
LUPH01000018
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
6491
6575
+
Leu
CAG
[ENA]
¡û
>W1711126834
LUPI01000100
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
3808
3724
-
Leu
CAG
[ENA]
¡û
>W1711126878
LUPK01000006
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
3808
3724
-
Leu
CAG
[ENA]
¡û
>W1711126953
LUPL01000179
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
909
825
-
Leu
CAG
[ENA]
¡û
>W1711127068
LUPO01000052
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
3810
3726
-
Leu
CAG
[ENA]
¡û
>W1711127146
LUPQ01000141
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
6714
6630
-
Leu
CAG
[ENA]
¡û
>W1711793208
MWLL01000012
Actinomycetota
Kineosporia sp. R_H_3 [MWLL]
12491
12405
-
Leu
CAG
[ENA]
¡û
>W1711793308
MWLN01000076
Actinomycetota
Kineosporia sp. A_224 A 224 [MWLN]
1471
1557
+
Leu
CAG
[ENA]
¡û
>W1712084129
NHQT01000005
Actinomycetota
Nocardioides sp. XL1 [NHQT]
11425
11341
-
Leu
CAG
[ENA]
¡û
>C015180
CP000509
Actinomycetota
Nocardioides sp. JS614 [CP000509]
32617
32700
+
Leu
CAG
[Ensembl]
¡û
>WENV180000014
CZKA01000013
[CZKA] metagenome; liquid mineral medium
22043
21959
-
Leu
CAG
[ENA]
¡û
>WENV180000095
CZKB01000027
[CZKB] metagenome; liquid mineral medium
256734
256648
-
Leu
CAG
[ENA]
¡û
>WENV180345330
OBLM01256040
[OBLM] soil metagenome; soil
108
22
-
Leu
CAG
[ENA]
¡û
>WENV181223171
OFDC01002552
[OFDC] hot springs metagenome; Water
7106
7022
-
Leu
CAG
[ENA]
¡û
>WENV181295324
OFHI01020145
[OFHI] soil metagenome; Clay
435
349
-
Leu
CAG
[ENA]
¡û
>W141277545
JAER01000017
Actinomycetota
Nocardioides sp. J54 [JAER]
69034
69118
+
Leu
CAG
[ENA]
¡û
>WENV170229294
CEQG01098976
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
375
291
-
Leu
CAG
[ENA]
¡û
>WENV170372999
CETS01155589
[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
101
185
+
Leu
CAG
[ENA]
¡û
>WENV170551690
CXWJ01017735
[CXWJ] wastewater metagenome; activated sludge
2884
2800
-
Leu
CAG
[ENA]
¡û
>WENV170553953
CXWK01039393
[CXWK] wastewater metagenome; activated sludge
5722
5808
+
Leu
CAG
[ENA]
¡û
>WENV170728662
LULF01000090
[LULF] marine metagenome; Red Sea water column Station 169 - depth 500m
3810
3726
-
Leu
CAG
[ENA]
¡û
>WENV170731965
LULI01008977
[LULI] marine metagenome; Red Sea water column Station 169 - depth 50m
2186
2270
+
Leu
CAG
[ENA]
¡û
>WENV170733011
LULJ01003380
[LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m
341
425
+
Leu
CAG
[ENA]
¡û
>WENV170734250
LULK01002748
[LULK] marine metagenome; Red Sea water column Station 169 - depth 10m
909
825
-
Leu
CAG
[ENA]
¡û
>WENV170735171
LULL01000143
[LULL] marine metagenome; Red Sea water column Station 149 - depth 500m
3808
3724
-
Leu
CAG
[ENA]
¡û
>WENV170736437
LULM01003357
[LULM] marine metagenome; Red Sea water column Station 149 - depth 200m
670
754
+
Leu
CAG
[ENA]
¡û
>WENV170737535
LULO01000489
[LULO] marine metagenome; Red Sea water column Station 149 - depth 50m
3808
3724
-
Leu
CAG
[ENA]
¡û
>WENV170739388
LULQ01000667
[LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m
99
15
-
Leu
CAG
[ENA]
¡û
>WENV170740386
LULR01007709
[LULR] marine metagenome; Red Sea water column Station 108 - depth 500m
2106
2190
+
Leu
CAG
[ENA]
¡û
>WENV170741770
LULT01003566
[LULT] marine metagenome; Red Sea water column Station 108 - depth 100m
460
376
-
Leu
CAG
[ENA]
¡û
>WENV170746466
LULZ01044080
[LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m
323
407
+
Leu
CAG
[ENA]
¡û
>WENV170758975
LUMS01000715
[LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m
5591
5675
+
Leu
CAG
[ENA]
¡û
>WENV170760819
LUMU01000299
[LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m
6714
6630
-
Leu
CAG
[ENA]
¡û
>WENV170761942
LUMW01000154
[LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m
3808
3724
-
Leu
CAG
[ENA]
¡û
>C181119551
CP025581
Actinomycetota
Nocardioides houyundeii 78 [CP025581]
29871
29957
+
Leu
CAG
-
¡û
>C191104174
CP033324
Actinomycetota
Nocardioides pantholopis 603 [CP033324]
34782
34868
+
Leu
CAG
-
¡û
>C191150893
CP036403
Actinomycetota
Ornithinimicrobium sp. HY006 [CP036403]
72707
72791
+
Leu
CAG
-
¡û
>C191158859
CP038267
Actinomycetota
Nocardioides euryhalodurans MMS17-SY117 [CP038267]
2433651
2433567
-
Leu
CAG
-
¡û
>C191159898
CP038462
Actinomycetota
Nocardioides daphniae JCM 16608 [CP038462]
28490
28574
+
Leu
CAG
-
¡û
>C191182458
CP040748
Actinomycetota
Nocardioides jishulii dk3136 [CP040748]
35913
35997
+
Leu
CAG
-
¡û
>C191186687
CP041091
Actinomycetota
Nocardioides sambongensis KUDC 5002 [CP041091]
3771417
3771501
+
Leu
CAG
-
¡û
>C191186990
CP041146
Actinomycetota
Nocardioides humi DCY24 [CP041146]
3193219
3193303
+
Leu
CAG
-
¡û
>W141564496
JIAV01000009
Actinomycetota
Nocardioides sp. URHA0032 [JIAV]
197213
197299
+
Leu
CAG
[ENA]
¡û
>W09103269
AAJB01000025
Actinomycetota
Nocardioides sp. JS614 [AAJB]
53124
53040
-
Leu
CAG
[ENA]
¡û
>W141815847
JQJL01000011
Actinomycetota
Nocardioides sp. UNC345MFTsu5.1 [JQJL]
286254
286170
-
Leu
CAG
[ENA]
¡û
>W1910141238
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
1249601
1249515
-
Leu
CAG
[ENA]
¡û
>W1910181546
BJMC01000016
Actinomycetota
Pimelobacter simplex NBRC 12069 [BJMC]
162493
162409
-
Leu
CAG
[ENA]
¡û
>W1911495871
OBQK01000030
Actinomycetota
Ornithinimicrobium pekingense USBA17B2 [OBQK]
4936
5022
+
Leu
CAG
[ENA]
¡û
>W1911768155
QXGH01000020
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
47564
47648
+
Leu
CAG
[ENA]
¡û
>W1911817425
QZMN01000006
Actinomycetota
Ornithinimicrobium sp. CPCC 203383 [QZMN]
214967
214881
-
Leu
CAG
[ENA]
¡û
>W1810201558
POAG01000001
Actinomycetota
Nocardioides sp. 616 [POAG]
2327
2241
-
Leu
CAG
[ENA]
¡û
>W1810462722
PZYZ01000004
Actinomycetota
Nocardioides sediminis KCTC 19271 [PZYZ]
72246
72332
+
Leu
CAG
[ENA]
¡û
>W1810503991
QBKO01000003
Actinomycetota
Nocardioides sp. CF167 [QBKO]
222889
222805
-
Leu
CAG
[ENA]
¡û
>W1810539892
QDGZ01000001
Actinomycetota
Nocardioides gansuensis WSJ-1 [QDGZ]
18327
18243
-
Leu
CAG
[ENA]
¡û
>W1810577872
QEOO01000016
Actinomycetota
Nocardioides speluncae YIM ART13 [QEOO]
533233
533319
+
Leu
CAG
[ENA]
¡û
>W1810626167
QHKX01000001
Actinomycetota
Nocardioides solisilvae Ka25 [QHKX]
751699
751785
+
Leu
CAG
[ENA]
¡û
>W1810756464
QPFD01000006
Actinomycetota
Nocardioides houyundeii 601 [QPFD]
402594
402678
+
Leu
CAG
[ENA]
¡û
>C151061319
CP009896
Actinomycetota
Pimelobacter simplex VKM Ac-2033D [CP009896]
60262
60346
+
Leu
CAG
[Ensembl]
¡û
>W2010083045
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
1249601
1249515
-
Leu
CAG
[ENA]
¡û
>W2010095195
BJMC01000016
Actinomycetota
Pimelobacter simplex NBRC 12069 [BJMC]
162493
162409
-
Leu
CAG
[ENA]
¡û
>W2010309729
CABWLN010000049
Actinomycetota
Nocardioides sp. AX2bis [CABWLN]
26560
26476
-
Leu
CAG
[ENA]
¡û
>W2010494580
JAALAA010000004
Actinomycetota
Nocardioides sp. KC13 [JAALAA]
299161
299075
-
Leu
CAG
[ENA]
¡û
>W2010520033
JAAMYA010000001
Actinomycetota
Nocardioides sp. W3-2-3 [JAAMYA]
2866001
2865917
-
Leu
CAG
[ENA]
¡û
>W2010603314
JABJQZ010000001
Actinomycetota
Nocardioides sp. zg-1230 [JABJQZ]
994108
994194
+
Leu
CAG
[ENA]
¡û
>W2010603399
JABJRA010000014
Actinomycetota
Nocardioides sp. zg-DK7169 [JABJRA]
80673
80757
+
Leu
CAG
[ENA]
¡û
>W2010604543
JABJWT010000003
Actinomycetota
Nocardioides sp. MC1495 [JABJWT]
617544
617458
-
Leu
CAG
[ENA]
¡û
>W2010604565
JABJWU010000001
Actinomycetota
Nocardioides sp. Y192 [JABJWU]
660470
660384
-
Leu
CAG
[ENA]
¡û
>W2010668218
JACBZI010000001
Actinomycetota
Nocardioides marinus DSM 18248 [JACBZI]
3857666
3857750
+
Leu
CAG
[ENA]
¡û
>W2010668381
JACBZM010000001
Actinomycetota
Nocardioides aromaticivorans DSM 15131 [JACBZM]
2125915
2125999
+
Leu
CAG
[ENA]
¡û
>W2010668625
JACBZR010000001
Actinomycetota
Nocardioides panzhihuensis DSM 26487 [JACBZR]
5167221
5167305
+
Leu
CAG
[ENA]
¡û
>W2010669024
JACCAA010000001
Actinomycetota
Nocardioides daedukensis DSM 23819 [JACCAA]
2401133
2401217
+
Leu
CAG
[ENA]
¡û
>W2010670689
JACCBE010000001
Actinomycetota
Nocardioides marinisabuli DSM 18965 [JACCBE]
1357930
1358016
+
Leu
CAG
[ENA]
¡û
>W2010670749
JACCBF010000001
Actinomycetota
Nocardioides kongjuensis DSM 19082 [JACCBF]
4155023
4155107
+
Leu
CAG
[ENA]
¡û
>W2010670819
JACCBG010000001
Actinomycetota
Nocardioides panaciterrulae DSM 21350 [JACCBG]
17941
17857
-
Leu
CAG
[ENA]
¡û
>W2010671569
JACCBW010000001
Actinomycetota
Nocardioides cavernae AT2.17 [JACCBW]
1462515
1462431
-
Leu
CAG
[ENA]
¡û
>W2010674840
JACCFP010000001
Actinomycetota
Nocardioides thalensis DSM 103833 [JACCFP]
4470179
4470263
+
Leu
CAG
[ENA]
¡û
>W2010681827
JACEHF010000041
Actinomycetota
Nocardioides pelophilus CGMCC 4.7388 [JACEHF]
24255
24171
-
Leu
CAG
[ENA]
¡û
>W2010692061
JACGXA010000003
Actinomycetota
Nocardioides ginsengisegetis DSM 21349 [JACGXA]
19490
19406
-
Leu
CAG
[ENA]
¡û
>W2010716275
JACHXG010000002
Actinomycetota
Nocardioides albus CECT 3302 [JACHXG]
113783
113869
+
Leu
CAG
[ENA]
¡û
>W2010744193
JACKXE010000001
Actinomycetota
Nocardioides sp. KIGAM211 [JACKXE]
2362777
2362691
-
Leu
CAG
[ENA]
¡û
>W2011156775
OBQK01000030
Actinomycetota
Ornithinimicrobium pekingense USBA17B2 [OBQK]
4936
5022
+
Leu
CAG
[ENA]
¡û
>W2011325750
QXGH01000020
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
47564
47648
+
Leu
CAG
[ENA]
¡û
>W2011350150
QZMN01000006
Actinomycetota
Ornithinimicrobium sp. CPCC 203383 [QZMN]
214967
214881
-
Leu
CAG
[ENA]
¡û
>W2011417123
RHDV01000001
Actinomycetota
Nocardioides sp. X2025 [RHDV]
700486
700400
-
Leu
CAG
[ENA]
¡û
>W2011546757
SDKM01000045
Actinomycetota
Nocardioides sp. 130 [SDKM]
19171
19255
+
Leu
CAG
[ENA]
¡û
>W2011553305
SDWT01000001
Actinomycetota
Nocardioides oleivorans CGMCC 4.6882 [SDWT]
1422714
1422800
+
Leu
CAG
[ENA]
¡û
>W2011553369
SDWU01000015
Actinomycetota
Nocardioides ganghwensis CGMCC 4.6875 [SDWU]
68017
67931
-
Leu
CAG
[ENA]
¡û
>W2011616581
SKBS01000017
Actinomycetota
Serinicoccus sp. HY008 [SKBS]
32739
32823
+
Leu
CAG
[ENA]
¡û
>W2011680322
SRRO01000001
Actinomycetota
Nocardioides sp. MMS17-SY213 [SRRO]
799344
799258
-
Leu
CAG
[ENA]
¡û
>W2011693585
SSXI01000214
Actinomycetota
Nocardioides bacterium 21Sc5-5 [SSXI]
6808
6892
+
Leu
CAG
[ENA]
¡û
>W2011694883
STGK01000001
Actinomycetota
Nocardioides sp. GY 10113 [STGK]
217392
217476
+
Leu
CAG
[ENA]
¡û
>W2011695405
STGW01000010
Actinomycetota
Nocardioides caeni DSM 23134 [STGW]
34687
34771
+
Leu
CAG
[ENA]
¡û
>W2011751885
SZPY01000001
Actinomycetota
Nocardioides sp. dk3543 [SZPY]
546892
546808
-
Leu
CAG
[ENA]
¡û
>W2011985430
VDMP01000025
Actinomycetota
Nocardioides albidus CCTCC AB 2015297 [VDMP]
293670
293754
+
Leu
CAG
[ENA]
¡û
>W2012018784
VFNJ01000001
Actinomycetota
Nocardioides sp. SLBN-172 [VFNJ]
276123
276209
+
Leu
CAG
[ENA]
¡û
>W2012019514
VFNU01000001
Actinomycetota
Nocardioides sp. SLBN-35 [VFNU]
246782
246698
-
Leu
CAG
[ENA]
¡û
>W2012019681
VFNY01000001
Actinomycetota
Nocardioides sp. SLBN-169 [VFNY]
883726
883810
+
Leu
CAG
[ENA]
¡û
>W2012020911
VFOV01000001
Actinomycetota
Nocardioides albertanoniae DSM 25218 [VFOV]
149514
149430
-
Leu
CAG
[ENA]
¡û
>W2012080346
VLJQ01000065
Actinomycetota
Nocardioides sp. J9 [VLJQ]
40687
40602
-
Leu
CAG
[ENA]
¡û
>W2012093539
VMSC01000001
Actinomycetota
Nocardioides sp. SAI-095 HBUM178932 SAI-095 [VMSC]
3944152
3944066
-
Leu
CAG
[ENA]
¡û
>W2012132428
VSSA01000003
Actinomycetota
Nocardioides sp. BGMRC 2183 [VSSA]
238233
238149
-
Leu
CAG
[ENA]
¡û
>W2012152131
VUJV01000002
Actinomycetota
Nocardioides sp. BN130099 [VUJV]
23078
23164
+
Leu
CAG
[ENA]
¡û
>W2012152193
VUJW01000006
Actinomycetota
Nocardioides sp. BN140041 [VUJW]
122486
122570
+
Leu
CAG
[ENA]
¡û
>W2012232873
WBVM01000001
Actinomycetota
Pimelobacter simplex Pch-N [WBVM]
3185547
3185631
+
Leu
CAG
[ENA]
¡û
>W2012341373
WITM01000007
Actinomycetota
Nocardioides sp. dk4132 [WITM]
225625
225709
+
Leu
CAG
[ENA]
¡û
>W2012433944
WTFR01000001
Actinomycetota
Nocardioides sp. ZJ1313 [WTFR]
1337231
1337315
+
Leu
CAG
[ENA]
¡û
>W2012433989
WTFS01000001
Actinomycetota
Nocardioides sp. ZJ1307 [WTFS]
290556
290640
+
Leu
CAG
[ENA]
¡û
>W2110018901
BMCK01000001
Actinomycetota
Nocardioides daphniae CCM 7403 [BMCK]
783447
783363
-
Leu
CAG
[ENA]
¡û
>W2110037164
BMQT01000004
Actinomycetota
Nocardioides albus JCM 3185 [BMQT]
113753
113839
+
Leu
CAG
[ENA]
¡û
>W2110051311
BNAD01000001
Actinomycetota
Nocardioides flavus Wang et al. 2016 CGMCC 1.12791 [BNAD]
638158
638244
+
Leu
CAG
[ENA]
¡û
>W2110133166
CAKASO010000010
Actinomycetota
Nocardioides sp. Leaf374 [CAKASO]
32995
32911
-
Leu
CAG
[ENA]
¡û
>W2110201564
JACDTV010000015
Actinomycetota
Nocardioides salarius DSM 18239 [JACDTV]
61822
61736
-
Leu
CAG
[ENA]
¡û
>W2110220990
JACJGL010000002
Actinomycetota
Nocardioides dongkuii 406 [JACJGL]
226814
226898
+
Leu
CAG
[ENA]
¡û
>W2110239584
JACMYB010000001
Actinomycetota
Nocardioides sp. zg-1228 [JACMYB]
838178
838264
+
Leu
CAG
[ENA]
¡û
>W2110285437
JACXYX010000016
Actinomycetota
Nocardioides ganghwensis 9920 [JACXYX]
68276
68190
-
Leu
CAG
[ENA]
¡û
>W2110285482
JACXYY010000007
Actinomycetota
Nocardioides hwasunensis 19197 [JACXYY]
147268
147354
+
Leu
CAG
[ENA]
¡û
>W2110293163
JACYXZ010000001
Actinomycetota
Nocardioides sp. MJB4 [JACYXZ]
22109
22195
+
Leu
CAG
[ENA]
¡û
>W2110303453
JADCLI010000057
Actinomycetota
Pimelobacter simplex 3E [JADCLI]
24888
24804
-
Leu
CAG
[ENA]
¡û
>W2110303553
JADCLL010000002
Actinomycetota
Nocardioides kribbensis DSM 16314 [JADCLL]
120831
120747
-
Leu
CAG
[ENA]
¡û
>W2110303615
JADCLM010000018
Actinomycetota
Nocardioides salarius DSM 18239 [JADCLM]
61822
61736
-
Leu
CAG
[ENA]
¡û
>W2110304674
JADCSA010000006
Actinomycetota
Nocardioides malaquae Y6 [JADCSA]
10459
10543
+
Leu
CAG
[ENA]
¡û
>W2110327927
JADKPN010000001
Actinomycetota
Nocardioides islandensis KCTC 19275 [JADKPN]
588264
588350
+
Leu
CAG
[ENA]
¡û
>W2110327994
JADKPO010000014
Actinomycetota
Nocardioides agariphilus KCTC 19276 [JADKPO]
106399
106314
-
Leu
CAG
[ENA]
¡û
>W2110363768
JADOVJ010000001
Actinomycetota
Nocardioides luteus SAI-037 [JADOVJ]
5538938
5538852
-
Leu
CAG
[ENA]
¡û
>W2110441161
JAERJA010000010
Actinomycetota
Nocardioides sp. DJM-14 [JAERJA]
46402
46486
+
Leu
CAG
[ENA]
¡û
>W2110458352
JAFBBY010000001
Actinomycetota
Nocardioides nitrophenolicus DSM 15529 [JAFBBY]
2572984
2572900
-
Leu
CAG
[ENA]
¡û
>W2110458409
JAFBBZ010000001
Actinomycetota
Nocardioides salarius DSM 18239 [JAFBBZ]
2120798
2120712
-
Leu
CAG
[ENA]
¡û
>W2110516070
JAFMSW010000001
Actinomycetota
Nocardioides sp. SYSU D00514 [JAFMSW]
1801125
1801211
+
Leu
CAG
[ENA]
¡û
>W2110516136
JAFMSX010000003
Actinomycetota
Nocardioides sp. SYSU D00065 [JAFMSX]
144300
144384
+
Leu
CAG
[ENA]
¡û
>W2110516160
JAFMSY010000001
Actinomycetota
Nocardioides sp. SYSU D00778 [JAFMSY]
1791406
1791492
+
Leu
CAG
[ENA]
¡û
>W2110576047
JAGVQR010000004
Actinomycetota
Nocardioides sp. J2M5 [JAGVQR]
1063156
1063070
-
Leu
CAG
[ENA]
¡û
>W2110645663
JAHTKU010000028
Actinomycetota
Nocardioides daeguensis 2C1-5 [JAHTKU]
16104
16020
-
Leu
CAG
[ENA]
¡û
>C201147314
CP044344
Actinomycetota
Nocardioides sp. SB3-45 [CP044344]
2939000
2938914
-
Leu
CAG
-
¡û
>C211031972
CP022295
Actinomycetota
Nocardioides aromaticivorans IC177 [CP022295]
70464
70548
+
Leu
CAG
-
¡û
>C211125517
CP059903
Actinomycetota
Nocardioides sp. S-713 [CP059903]
44878
44962
+
Leu
CAG
-
¡û
>C211152966
CP061768
Actinomycetota
Nocardioides sp. MC1495 [CP061768]
28630
28716
+
Leu
CAG
-
¡û
>C211153011
CP061769
Actinomycetota
Nocardioides sp. ZJ1313 [CP061769]
31577
31661
+
Leu
CAG
-
¡û
>C211280929
CP070961
Actinomycetota
Nocardioides sp. zg-1228 [CP070961]
42911
42997
+
Leu
CAG
-
¡û
>C211336912
CP075371
Actinomycetota
Nocardioides aquaticus KCTC 9944 [CP075371]
46411
46495
+
Leu
CAG
-
¡û
>W1510015456
BBRA01000001
Actinomycetota
Demequina flava NBRC 105854 [BBRA]
1162932
1163016
+
Leu
CAG
[ENA]
¡û
>W1510015695
BBRF01000001
Actinomycetota
Demequina aurantiaca NBRC 106265 [BBRF]
773557
773473
-
Leu
CAG
[ENA]
¡û
>C231084840
CP060034
Actinomycetota
Nocardioides sp. InS609-2 [CP060034]
2681969
2682053
+
Leu
CAG
-
¡û
>C231244828
CP087710
Actinomycetota
Nocardioides okcheonensis MMS20-HV4-12 [CP087710]
2736832
2736918
+
Leu
CAG
-
¡û
>W2110752396
NHTS01000001
Actinomycetota
Pimelobacter sp. 30-1 [NHTS]
42029
42113
+
Leu
CAG
[ENA]
¡û
>C231368865
CP096276
Actinomycetota
Pimelobacter simplex N40 [CP096276]
4847685
4847601
-
Leu
CAG
-
¡û
>C231395628
CP097984
Actinomycetota
Pimelobacter simplex N39 [CP097984]
1084336
1084252
-
Leu
CAG
-
¡û
>C241089169
CP044427
Actinomycetota
Ornithinimicrobium pratense W204 [CP044427]
72512
72596
+
Leu
CAG
-
¡û
>C241098606
CP045649
Actinomycetota
Nocardioides sp. dk884 [CP045649]
38395
38479
+
Leu
CAG
-
¡û
>C241147615
CP050902
Actinomycetota
Nocardioides sp. JQ2195 [CP050902]
27749
27833
+
Leu
CAG
-
¡û
>W2130020423
JADIVZ010000017
Actinomycetota
Nocardioides acrostichi CBS4Y-1 [JADIVZ]
74027
74111
+
Leu
CAG
[ENA]
¡û
>C241176381
CP059163
Actinomycetota
Nocardioides marinisabuli DSM 18965 [CP059163]
1595934
1596020
+
Leu
CAG
-
¡û
>C241176423
CP059164
Actinomycetota
Nocardioides ungokensis LMG 28591 [CP059164]
33027
33111
+
Leu
CAG
-
¡û
>C241205183
CP107970
Actinomycetota
Nocardioides sp. NBC_00368 [CP107970]
4336402
4336316
-
Leu
CAG
-
¡û
>C241253968
CP124681
Actinomycetota
Nocardioides sp. QY071 [CP124681]
58130
58214
+
Leu
CAG
-
¡û
>W2310010963
BNET01000006
Actinomycetota
Nocardioides sp. OK12 [BNET]
237323
237409
+
Leu
CAG
[ENA]
¡û
>W11125276
ADVI01000013
Actinomycetota
Nocardioidaceae bacterium Broad-1 [ADVI]
53608
53694
+
Leu
CAG
[ENA]
¡û
>W1511540065
JZDQ01000149
Actinomycetota
Nocardioides luteus BAFB [JZDQ]
12125
12039
-
Leu
CAG
[ENA]
¡û
>C161082860
CP015079
Actinomycetota
Nocardioides dokdonensis FR1436 [CP015079]
1358871
1358955
+
Leu
CAG
[Ensembl]
¡û
>W1610049569
BBFC01000105
Actinomycetota
Nocardioides sp. JCM 18999 [BBFC]
2125
2041
-
Leu
CAG
[ENA]
¡û
>W1610050515
BBFY01000204
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BBFY]
1057
1141
+
Leu
CAG
[ENA]
¡û
>W1610051043
BBGL01000026
Actinomycetota
Nocardioides aromaticivorans JCM 11674 [BBGL]
3733
3649
-
Leu
CAG
[ENA]
¡û
>W1610051406
BBGV01000774
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
523
607
+
Leu
CAG
[ENA]
¡û
>W1610068466
BCRJ01000006
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BCRJ]
33210
33294
+
Leu
CAG
[ENA]
¡û
>W1610723184
LMDE01000014
Actinomycetota
Nocardioides sp. Root122 [LMDE]
81533
81619
+
Leu
CAG
[ENA]
¡û
>W1610726047
LMFI01000010
Actinomycetota
Nocardioides sp. Root140 [LMFI]
1521767
1521851
+
Leu
CAG
[ENA]
¡û
>W1610727247
LMGG01000001
Actinomycetota
Nocardioides sp. Root151 [LMGG]
1656555
1656471
-
Leu
CAG
[ENA]
¡û
>W1610730172
LMIP01000011
Actinomycetota
Nocardioides sp. Root79 [LMIP]
944046
943962
-
Leu
CAG
[ENA]
¡û
>W1610730376
LMIT01000012
Actinomycetota
Nocardioides sp. Root240 [LMIT]
154247
154163
-
Leu
CAG
[ENA]
¡û
>W1610736425
LMNH01000004
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
587759
587843
+
Leu
CAG
[ENA]
¡û
>W1610737233
LMNY01000003
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
115769
115685
-
Leu
CAG
[ENA]
¡û
>W1610743216
LMSQ01000002
Actinomycetota
Nocardioides sp. Soil796 [LMSQ]
123301
123217
-
Leu
CAG
[ENA]
¡û
>W1610743264
LMSR01000002
Actinomycetota
Nocardioides sp. Soil797 [LMSR]
16627
16543
-
Leu
CAG
[ENA]
¡û
>W1610937858
LUPG01000367
Actinomycetota
Nocardioides sp. REDSEA-S25_B9 [LUPG]
460
376
-
Leu
CAG
[ENA]
¡û
>W1610937872
LUPH01000018
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
6491
6575
+
Leu
CAG
[ENA]
¡û
>W1610937948
LUPI01000100
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
3808
3724
-
Leu
CAG
[ENA]
¡û
>W1610937992
LUPK01000006
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
3808
3724
-
Leu
CAG
[ENA]
¡û
>W1610938067
LUPL01000179
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
909
825
-
Leu
CAG
[ENA]
¡û
>W1610938182
LUPO01000052
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
3810
3726
-
Leu
CAG
[ENA]
¡û
>W1610938260
LUPQ01000141
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
6714
6630
-
Leu
CAG
[ENA]
¡û
>W1710045968
BBFC01000105
Actinomycetota
Nocardioides sp. JCM 18999 [BBFC]
2125
2041
-
Leu
CAG
[ENA]
¡û
>W1710046914
BBFY01000204
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BBFY]
1057
1141
+
Leu
CAG
[ENA]
¡û
>W1710047442
BBGL01000026
Actinomycetota
Nocardioides aromaticivorans JCM 11674 [BBGL]
3733
3649
-
Leu
CAG
[ENA]
¡û
>W1710047784
BBGV01000774
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
523
607
+
Leu
CAG
[ENA]
¡û
>W1710065839
BCRJ01000006
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BCRJ]
33210
33294
+
Leu
CAG
[ENA]
¡û
>W1710520322
FNFN01000002
Actinomycetota
Nocardioides sp. YR527 [FNFN]
716149
716063
-
Leu
CAG
[ENA]
¡û
>W1710534304
FNRT01000002
Actinomycetota
Nocardioides exalbidus [FNRT]
1453619
1453533
-
Leu
CAG
[ENA]
¡û
>W1710569419
FOUK01000004
Actinomycetota
Pimelobacter simplex [FOUK]
328681
328765
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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