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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.129238 (7 seq.)
>W1711405747
MGDC01000013
Unclassified
Candidatus Schekmanbacteria bacterium GWA2_38_9 [MGDC]
85455
85535
+
Leu
GAG
[ENA]
¡û
>W1910720405
MGDG01000018
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11 [MGDG]
2987
3067
+
Leu
GAG
[ENA]
¡û
>W1910720455
MGDH01000011
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_14 [MGDH]
85580
85660
+
Leu
GAG
[ENA]
¡û
>W1910720510
MGDI01000025
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15 [MGDI]
212025
211945
-
Leu
GAG
[ENA]
¡û
>W2010853831
MGDG01000018
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11 [MGDG]
2987
3067
+
Leu
GAG
[ENA]
¡û
>W2010853881
MGDH01000011
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_14 [MGDH]
85580
85660
+
Leu
GAG
[ENA]
¡û
>W2010853936
MGDI01000025
Unclassified
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15 [MGDI]
212025
211945
-
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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