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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.129539 (6 seq.)
>WENV180680639
OCVV012595027
[OCVV] gut metagenome; gut
64
144
+
Ser
GCT
[ENA]
¡û
>WENV180680640
OCVV012595027
[OCVV] gut metagenome; gut
64
144
+
Ser
GCT
[ENA]
¡û
>WENV180686055
OCVV012881618
[OCVV] gut metagenome; gut
432
352
-
Ser
GCT
[ENA]
¡û
>WENV180686056
OCVV012881618
[OCVV] gut metagenome; gut
432
352
-
Ser
GCT
[ENA]
¡û
>WENV180686819
OCVV012899204
[OCVV] gut metagenome; gut
109
29
-
Ser
GCT
[ENA]
¡û
>WENV180686820
OCVV012899204
[OCVV] gut metagenome; gut
109
29
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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